RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 NDUFC1O43677 76 aa5.74□□□□□ -1.49
APOC1-206ENST00000590334 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
APOC1-206ENST00000590334 MT2AP02795 61 aa5.72□□□□□ -1.49
APOC1-206ENST00000590334 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
APOC1-206ENST00000590334 H7BZZ5 65 aa5.71□□□□□ -1.5
APOC1-206ENST00000590334 ACYP2P14621 99 aa5.71□□□□□ -1.5
APOC1-206ENST00000590334 CCDC179H3BU77 68 aa5.7□□□□□ -1.5
APOC1-206ENST00000590334 MT1FP04733 61 aa5.67□□□□□ -1.5
APOC1-206ENST00000590334 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
APOC1-206ENST00000590334 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
APOC1-206ENST00000590334 H0YAA0 97 aa5.61□□□□□ -1.51
APOC1-206ENST00000590334 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
APOC1-206ENST00000590334 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
APOC1-206ENST00000590334 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
APOC1-206ENST00000590334 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
APOC1-206ENST00000590334 COA5Q86WW8 74 aa5.56□□□□□ -1.52
APOC1-206ENST00000590334 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
APOC1-206ENST00000590334 TMEM258P61165 79 aa5.52□□□□□ -1.53
APOC1-206ENST00000590334 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
APOC1-206ENST00000590334 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
APOC1-206ENST00000590334 LCE2BO14633 110 aa5.48□□□□□ -1.53
APOC1-206ENST00000590334 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
APOC1-206ENST00000590334 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
APOC1-206ENST00000590334 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
APOC1-206ENST00000590334 PCP4P48539 62 aa5.45□□□□□ -1.54
APOC1-206ENST00000590334 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
APOC1-206ENST00000590334 P0C880 135 aa5.44□□□□□ -1.54
APOC1-206ENST00000590334 USH2AO75445 5202 aa5.42□□□□□ -1.54
APOC1-206ENST00000590334 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
APOC1-206ENST00000590334 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
APOC1-206ENST00000590334 SERP1Q9Y6X1 66 aa5.34□□□□□ -1.55
APOC1-206ENST00000590334 R4GN34 69 aa5.34□□□□□ -1.55
APOC1-206ENST00000590334 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
APOC1-206ENST00000590334 SEC61GP60059 68 aa5.32□□□□□ -1.56
APOC1-206ENST00000590334 M0QZ58 72 aa5.31□□□□□ -1.56
APOC1-206ENST00000590334 MT1BP07438 61 aa5.3□□□□□ -1.56
APOC1-206ENST00000590334 Q5VV11 94 aa5.3□□□□□ -1.56
APOC1-206ENST00000590334 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
APOC1-206ENST00000590334 A0A1B0GU69 56 aa5.26□□□□□ -1.57
APOC1-206ENST00000590334 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
APOC1-206ENST00000590334 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
APOC1-206ENST00000590334 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
APOC1-206ENST00000590334 A0A1B0GU33 70 aa5.21□□□□□ -1.58
APOC1-206ENST00000590334 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
APOC1-206ENST00000590334 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
APOC1-206ENST00000590334 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
APOC1-206ENST00000590334 A6NN06 94 aa5.17□□□□□ -1.58
APOC1-206ENST00000590334 Q1T7F1 81 aa5.16□□□□□ -1.58
APOC1-206ENST00000590334 SMIM26A0A096LP01 95 aa5.15□□□□□ -1.59
APOC1-206ENST00000590334 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
APOC1-206ENST00000590334 V9GYY9 64 aa5.15□□□□□ -1.59
APOC1-206ENST00000590334 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
APOC1-206ENST00000590334 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
APOC1-206ENST00000590334 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
APOC1-206ENST00000590334 A0A0D9SG42 100 aa5.05□□□□□ -1.6
APOC1-206ENST00000590334 UQCR11O14957 56 aa5.05□□□□□ -1.6
APOC1-206ENST00000590334 MT1XP80297 61 aa5.05□□□□□ -1.6
APOC1-206ENST00000590334 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
APOC1-206ENST00000590334 PSPHP1O15172 72 aa5.03□□□□□ -1.6
APOC1-206ENST00000590334 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
APOC1-206ENST00000590334 A8MU10 97 aa5.01□□□□□ -1.61
APOC1-206ENST00000590334 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
APOC1-206ENST00000590334 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
APOC1-206ENST00000590334 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
APOC1-206ENST00000590334 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
APOC1-206ENST00000590334 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
APOC1-206ENST00000590334 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
APOC1-206ENST00000590334 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.63
APOC1-206ENST00000590334 A6NED7 52 aa4.89□□□□□ -1.63
APOC1-206ENST00000590334 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
APOC1-206ENST00000590334 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
APOC1-206ENST00000590334 K7ERS5 55 aa4.78□□□□□ -1.64
APOC1-206ENST00000590334 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
APOC1-206ENST00000590334 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
APOC1-206ENST00000590334 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
APOC1-206ENST00000590334 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
APOC1-206ENST00000590334 KMT2DO14686 5537 aa4.74□□□□□ -1.65
APOC1-206ENST00000590334 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
APOC1-206ENST00000590334 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
APOC1-206ENST00000590334 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
APOC1-206ENST00000590334 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
APOC1-206ENST00000590334 TNP1P09430 55 aa4.66□□□□□ -1.66
APOC1-206ENST00000590334 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
APOC1-206ENST00000590334 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
APOC1-206ENST00000590334 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
APOC1-206ENST00000590334 ROMO1P60602 79 aa4.54□□□□□ -1.68
APOC1-206ENST00000590334 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
APOC1-206ENST00000590334 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
APOC1-206ENST00000590334 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
APOC1-206ENST00000590334 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
APOC1-206ENST00000590334 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
APOC1-206ENST00000590334 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
APOC1-206ENST00000590334 MT1EP04732 61 aa4.45□□□□□ -1.7
APOC1-206ENST00000590334 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
APOC1-206ENST00000590334 SPRR2EP22531 72 aa4.44□□□□□ -1.7
APOC1-206ENST00000590334 SPRR2BP35325 72 aa4.44□□□□□ -1.7
APOC1-206ENST00000590334 SPRR2AP35326 72 aa4.44□□□□□ -1.7
APOC1-206ENST00000590334 NEBP20929 6669 aa4.42□□□□□ -1.7
APOC1-206ENST00000590334 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
APOC1-206ENST00000590334 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms