RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
VPS25-203ENST00000589520 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
VPS25-203ENST00000589520 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
VPS25-203ENST00000589520 LRP2P98164 4655 aa5.45□□□□□ -1.54
VPS25-203ENST00000589520 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
VPS25-203ENST00000589520 A0A1B0GU69 56 aa5.43□□□□□ -1.54
VPS25-203ENST00000589520 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
VPS25-203ENST00000589520 SEC61GP60059 68 aa5.41□□□□□ -1.54
VPS25-203ENST00000589520 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
VPS25-203ENST00000589520 A6NED7 52 aa5.4□□□□□ -1.54
VPS25-203ENST00000589520 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
VPS25-203ENST00000589520 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
VPS25-203ENST00000589520 UQCR11O14957 56 aa5.32□□□□□ -1.56
VPS25-203ENST00000589520 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
VPS25-203ENST00000589520 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
VPS25-203ENST00000589520 LCA10Q71F78 164 aa5.3□□□□□ -1.56
VPS25-203ENST00000589520 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
VPS25-203ENST00000589520 SPATA8Q6RVD6 105 aa5.28□□□□□ -1.56
VPS25-203ENST00000589520 S4R3F8 94 aa5.28□□□□□ -1.56
VPS25-203ENST00000589520 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
VPS25-203ENST00000589520 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
VPS25-203ENST00000589520 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
VPS25-203ENST00000589520 A0A1B0GU33 70 aa5.21□□□□□ -1.58
VPS25-203ENST00000589520 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
VPS25-203ENST00000589520 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
VPS25-203ENST00000589520 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
VPS25-203ENST00000589520 A8MU10 97 aa5.17□□□□□ -1.58
VPS25-203ENST00000589520 LPAP08519 4548 aa5.15□□□□□ -1.58
VPS25-203ENST00000589520 H0YAA0 97 aa5.12□□□□□ -1.59
VPS25-203ENST00000589520 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
VPS25-203ENST00000589520 A6NN06 94 aa5.11□□□□□ -1.59
VPS25-203ENST00000589520 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
VPS25-203ENST00000589520 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
VPS25-203ENST00000589520 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
VPS25-203ENST00000589520 K7ERS5 55 aa5.06□□□□□ -1.6
VPS25-203ENST00000589520 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
VPS25-203ENST00000589520 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
VPS25-203ENST00000589520 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
VPS25-203ENST00000589520 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
VPS25-203ENST00000589520 M0QZ58 72 aa5.03□□□□□ -1.6
VPS25-203ENST00000589520 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
VPS25-203ENST00000589520 P0C880 135 aa4.98□□□□□ -1.61
VPS25-203ENST00000589520 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
VPS25-203ENST00000589520 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
VPS25-203ENST00000589520 A0A0D9SG42 100 aa4.88□□□□□ -1.63
VPS25-203ENST00000589520 R4GN34 69 aa4.88□□□□□ -1.63
VPS25-203ENST00000589520 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
VPS25-203ENST00000589520 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
VPS25-203ENST00000589520 ROMO1P60602 79 aa4.82□□□□□ -1.64
VPS25-203ENST00000589520 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
VPS25-203ENST00000589520 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
VPS25-203ENST00000589520 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
VPS25-203ENST00000589520 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
VPS25-203ENST00000589520 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
VPS25-203ENST00000589520 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
VPS25-203ENST00000589520 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
VPS25-203ENST00000589520 M0R2T5 61 aa4.72□□□□□ -1.65
VPS25-203ENST00000589520 MT1HP80294 61 aa4.7□□□□□ -1.66
VPS25-203ENST00000589520 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
VPS25-203ENST00000589520 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
VPS25-203ENST00000589520 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
VPS25-203ENST00000589520 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
VPS25-203ENST00000589520 CAMK2N1Q7Z7J9 78 aa4.6□□□□□ -1.67
VPS25-203ENST00000589520 MT2AP02795 61 aa4.56□□□□□ -1.68
VPS25-203ENST00000589520 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
VPS25-203ENST00000589520 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
VPS25-203ENST00000589520 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
VPS25-203ENST00000589520 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
VPS25-203ENST00000589520 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
VPS25-203ENST00000589520 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
VPS25-203ENST00000589520 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
VPS25-203ENST00000589520 USH2AO75445 5202 aa4.52□□□□□ -1.69
VPS25-203ENST00000589520 MT1FP04733 61 aa4.52□□□□□ -1.69
VPS25-203ENST00000589520 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
VPS25-203ENST00000589520 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
VPS25-203ENST00000589520 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
VPS25-203ENST00000589520 TNP1P09430 55 aa4.44□□□□□ -1.7
VPS25-203ENST00000589520 NEBP20929 6669 aa4.42□□□□□ -1.7
VPS25-203ENST00000589520 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
VPS25-203ENST00000589520 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
VPS25-203ENST00000589520 MT1BP07438 61 aa4.34□□□□□ -1.71
VPS25-203ENST00000589520 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
VPS25-203ENST00000589520 LCE2BO14633 110 aa4.3□□□□□ -1.72
VPS25-203ENST00000589520 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
VPS25-203ENST00000589520 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
VPS25-203ENST00000589520 MT1XP80297 61 aa4.23□□□□□ -1.73
VPS25-203ENST00000589520 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
VPS25-203ENST00000589520 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
VPS25-203ENST00000589520 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
VPS25-203ENST00000589520 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
VPS25-203ENST00000589520 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
VPS25-203ENST00000589520 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
VPS25-203ENST00000589520 KMT2DO14686 5537 aa4.1□□□□□ -1.75
VPS25-203ENST00000589520 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
VPS25-203ENST00000589520 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
VPS25-203ENST00000589520 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
VPS25-203ENST00000589520 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
VPS25-203ENST00000589520 KRTAP12-3P60328 96 aa4□□□□□ -1.77
VPS25-203ENST00000589520 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
VPS25-203ENST00000589520 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms