RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CYP4F30PQ9H0H9 118 aa4.81□□□□□ -1.64
SMAD4-206ENST00000588860 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
SMAD4-206ENST00000588860 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
SMAD4-206ENST00000588860 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
SMAD4-206ENST00000588860 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-206ENST00000588860 LRP2P98164 4655 aa4.78□□□□□ -1.64
SMAD4-206ENST00000588860 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
SMAD4-206ENST00000588860 A8MUU9 505 aa4.78□□□□□ -1.64
SMAD4-206ENST00000588860 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
SMAD4-206ENST00000588860 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
SMAD4-206ENST00000588860 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
SMAD4-206ENST00000588860 HRES1P13985 223 aa4.75□□□□□ -1.65
SMAD4-206ENST00000588860 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
SMAD4-206ENST00000588860 Q75L30 129 aa4.73□□□□□ -1.65
SMAD4-206ENST00000588860 COA5Q86WW8 74 aa4.72□□□□□ -1.65
SMAD4-206ENST00000588860 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
SMAD4-206ENST00000588860 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
SMAD4-206ENST00000588860 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
SMAD4-206ENST00000588860 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
SMAD4-206ENST00000588860 ACYP2P14621 99 aa4.67□□□□□ -1.66
SMAD4-206ENST00000588860 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
SMAD4-206ENST00000588860 ATP11AUNQ6ZP68 121 aa4.67□□□□□ -1.66
SMAD4-206ENST00000588860 MUC2Q02817 5179 aa4.66□□□□□ -1.66
SMAD4-206ENST00000588860 C4orf26Q17RF5 130 aa4.65□□□□□ -1.67
SMAD4-206ENST00000588860 SPINK7P58062 85 aa4.64□□□□□ -1.67
SMAD4-206ENST00000588860 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
SMAD4-206ENST00000588860 Q1T7F1 81 aa4.62□□□□□ -1.67
SMAD4-206ENST00000588860 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SMAD4-206ENST00000588860 V9GYY9 64 aa4.6□□□□□ -1.67
SMAD4-206ENST00000588860 A8MUN3 132 aa4.59□□□□□ -1.67
SMAD4-206ENST00000588860 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
SMAD4-206ENST00000588860 PSPHP1O15172 72 aa4.57□□□□□ -1.68
SMAD4-206ENST00000588860 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
SMAD4-206ENST00000588860 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
SMAD4-206ENST00000588860 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
SMAD4-206ENST00000588860 COX6B2Q6YFQ2 88 aa4.54□□□□□ -1.68
SMAD4-206ENST00000588860 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
SMAD4-206ENST00000588860 Q5VV11 94 aa4.5□□□□□ -1.69
SMAD4-206ENST00000588860 SPTSSBQ8NFR3 76 aa4.5□□□□□ -1.69
SMAD4-206ENST00000588860 LPAP08519 4548 aa4.49□□□□□ -1.69
SMAD4-206ENST00000588860 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
SMAD4-206ENST00000588860 A0A1B0GU69 56 aa4.46□□□□□ -1.7
SMAD4-206ENST00000588860 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
SMAD4-206ENST00000588860 A6NED7 52 aa4.43□□□□□ -1.7
SMAD4-206ENST00000588860 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
SMAD4-206ENST00000588860 S4R3F8 94 aa4.43□□□□□ -1.7
SMAD4-206ENST00000588860 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
SMAD4-206ENST00000588860 SEC61GP60059 68 aa4.4□□□□□ -1.71
SMAD4-206ENST00000588860 LCA10Q71F78 164 aa4.4□□□□□ -1.71
SMAD4-206ENST00000588860 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
SMAD4-206ENST00000588860 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
SMAD4-206ENST00000588860 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
SMAD4-206ENST00000588860 A8MU10 97 aa4.34□□□□□ -1.71
SMAD4-206ENST00000588860 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
SMAD4-206ENST00000588860 UQCR11O14957 56 aa4.32□□□□□ -1.72
SMAD4-206ENST00000588860 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
SMAD4-206ENST00000588860 A0A1B0GU33 70 aa4.29□□□□□ -1.72
SMAD4-206ENST00000588860 CSAG1Q6PB30 78 aa4.29□□□□□ -1.72
SMAD4-206ENST00000588860 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
SMAD4-206ENST00000588860 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
SMAD4-206ENST00000588860 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-206ENST00000588860 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
SMAD4-206ENST00000588860 H0YAA0 97 aa4.23□□□□□ -1.73
SMAD4-206ENST00000588860 P0C880 135 aa4.21□□□□□ -1.74
SMAD4-206ENST00000588860 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
SMAD4-206ENST00000588860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-206ENST00000588860 A6NN06 94 aa4.16□□□□□ -1.74
SMAD4-206ENST00000588860 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
SMAD4-206ENST00000588860 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-206ENST00000588860 A0A0D9SG42 100 aa4.13□□□□□ -1.75
SMAD4-206ENST00000588860 M0QZ58 72 aa4.1□□□□□ -1.75
SMAD4-206ENST00000588860 K7ERS5 55 aa4.09□□□□□ -1.75
SMAD4-206ENST00000588860 R4GN34 69 aa4.06□□□□□ -1.76
SMAD4-206ENST00000588860 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
SMAD4-206ENST00000588860 M0R2T5 61 aa4.04□□□□□ -1.76
SMAD4-206ENST00000588860 MT1HP80294 61 aa4.04□□□□□ -1.76
SMAD4-206ENST00000588860 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-206ENST00000588860 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
SMAD4-206ENST00000588860 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
SMAD4-206ENST00000588860 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
SMAD4-206ENST00000588860 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
SMAD4-206ENST00000588860 SSPOA2VEC9 5147 aa4□□□□□ -1.77
SMAD4-206ENST00000588860 KRTAP12-1P59990 96 aa4□□□□□ -1.77
SMAD4-206ENST00000588860 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
SMAD4-206ENST00000588860 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
SMAD4-206ENST00000588860 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
SMAD4-206ENST00000588860 USH2AO75445 5202 aa3.96□□□□□ -1.78
SMAD4-206ENST00000588860 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-206ENST00000588860 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SMAD4-206ENST00000588860 ROMO1P60602 79 aa3.93□□□□□ -1.78
SMAD4-206ENST00000588860 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
SMAD4-206ENST00000588860 MT2AP02795 61 aa3.91□□□□□ -1.78
SMAD4-206ENST00000588860 KRTAP10-10P60014 251 aa3.9□□□□□ -1.79
SMAD4-206ENST00000588860 MT1FP04733 61 aa3.89□□□□□ -1.79
SMAD4-206ENST00000588860 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
SMAD4-206ENST00000588860 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
SMAD4-206ENST00000588860 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
SMAD4-206ENST00000588860 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
SMAD4-206ENST00000588860 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
SMAD4-206ENST00000588860 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms