RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CSAG1Q6PB30 78 aa8.96□□□□□ -0.97
CLPTM1-209ENST00000588855 DMAC1Q96GE9 116 aa8.96□□□□□ -0.97
CLPTM1-209ENST00000588855 COX7CP15954 63 aa8.95□□□□□ -0.98
CLPTM1-209ENST00000588855 KRTAP10-10P60014 251 aa8.95□□□□□ -0.98
CLPTM1-209ENST00000588855 PCP4P48539 62 aa8.92□□□□□ -0.98
CLPTM1-209ENST00000588855 NDUFC1O43677 76 aa8.89□□□□□ -0.99
CLPTM1-209ENST00000588855 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
CLPTM1-209ENST00000588855 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
CLPTM1-209ENST00000588855 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
CLPTM1-209ENST00000588855 ACYP2P14621 99 aa8.8□□□□□ -1
CLPTM1-209ENST00000588855 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
CLPTM1-209ENST00000588855 FSIP2Q5CZC0 6907 aa8.78□□□□□ -1
CLPTM1-209ENST00000588855 USH2AO75445 5202 aa8.76□□□□□ -1.01
CLPTM1-209ENST00000588855 H7BZZ5 65 aa8.73□□□□□ -1.01
CLPTM1-209ENST00000588855 LCE2BO14633 110 aa8.71□□□□□ -1.01
CLPTM1-209ENST00000588855 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
CLPTM1-209ENST00000588855 H0YAA0 97 aa8.68□□□□□ -1.02
CLPTM1-209ENST00000588855 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
CLPTM1-209ENST00000588855 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
CLPTM1-209ENST00000588855 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
CLPTM1-209ENST00000588855 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
CLPTM1-209ENST00000588855 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
CLPTM1-209ENST00000588855 SSPOA2VEC9 5147 aa8.59□□□□□ -1.03
CLPTM1-209ENST00000588855 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
CLPTM1-209ENST00000588855 COA5Q86WW8 74 aa8.58□□□□□ -1.04
CLPTM1-209ENST00000588855 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
CLPTM1-209ENST00000588855 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
CLPTM1-209ENST00000588855 CRIPTQ9P021 101 aa8.53□□□□□ -1.04
CLPTM1-209ENST00000588855 P0C880 135 aa8.51□□□□□ -1.05
CLPTM1-209ENST00000588855 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
CLPTM1-209ENST00000588855 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
CLPTM1-209ENST00000588855 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
CLPTM1-209ENST00000588855 MT1BP07438 61 aa8.38□□□□□ -1.07
CLPTM1-209ENST00000588855 TMEM258P61165 79 aa8.37□□□□□ -1.07
CLPTM1-209ENST00000588855 Q5VV11 94 aa8.37□□□□□ -1.07
CLPTM1-209ENST00000588855 R4GN34 69 aa8.37□□□□□ -1.07
CLPTM1-209ENST00000588855 M0QZ58 72 aa8.34□□□□□ -1.08
CLPTM1-209ENST00000588855 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
CLPTM1-209ENST00000588855 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
CLPTM1-209ENST00000588855 SEC61GP60059 68 aa8.22□□□□□ -1.09
CLPTM1-209ENST00000588855 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
CLPTM1-209ENST00000588855 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
CLPTM1-209ENST00000588855 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
CLPTM1-209ENST00000588855 A0A1B0GU69 56 aa8.12□□□□□ -1.11
CLPTM1-209ENST00000588855 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
CLPTM1-209ENST00000588855 A6NN06 94 aa8.08□□□□□ -1.12
CLPTM1-209ENST00000588855 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
CLPTM1-209ENST00000588855 A0A1B0GU33 70 aa8.06□□□□□ -1.12
CLPTM1-209ENST00000588855 LINC01558Q9Y6Z2 57 aa8.03□□□□□ -1.12
CLPTM1-209ENST00000588855 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
CLPTM1-209ENST00000588855 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
CLPTM1-209ENST00000588855 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.98□□□□□ -1.13
CLPTM1-209ENST00000588855 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
CLPTM1-209ENST00000588855 MT1XP80297 61 aa7.96□□□□□ -1.14
CLPTM1-209ENST00000588855 A0A0D9SG42 100 aa7.93□□□□□ -1.14
CLPTM1-209ENST00000588855 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
CLPTM1-209ENST00000588855 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
CLPTM1-209ENST00000588855 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
CLPTM1-209ENST00000588855 A8MU10 97 aa7.81□□□□□ -1.16
CLPTM1-209ENST00000588855 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
CLPTM1-209ENST00000588855 V9GYY9 64 aa7.8□□□□□ -1.16
CLPTM1-209ENST00000588855 Q1T7F1 81 aa7.79□□□□□ -1.16
CLPTM1-209ENST00000588855 SPINT4Q6UDR6 99 aa7.78□□□□□ -1.16
CLPTM1-209ENST00000588855 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
CLPTM1-209ENST00000588855 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
CLPTM1-209ENST00000588855 KRTAP9-7A8MTY7 169 aa7.75□□□□□ -1.17
CLPTM1-209ENST00000588855 PSPHP1O15172 72 aa7.74□□□□□ -1.17
CLPTM1-209ENST00000588855 UQCR11O14957 56 aa7.73□□□□□ -1.17
CLPTM1-209ENST00000588855 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
CLPTM1-209ENST00000588855 KMT2DO14686 5537 aa7.66□□□□□ -1.18
CLPTM1-209ENST00000588855 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
CLPTM1-209ENST00000588855 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
CLPTM1-209ENST00000588855 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
CLPTM1-209ENST00000588855 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
CLPTM1-209ENST00000588855 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
CLPTM1-209ENST00000588855 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
CLPTM1-209ENST00000588855 A6NED7 52 aa7.48□□□□□ -1.21
CLPTM1-209ENST00000588855 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
CLPTM1-209ENST00000588855 KRTAP5-9P26371 169 aa7.44□□□□□ -1.22
CLPTM1-209ENST00000588855 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
CLPTM1-209ENST00000588855 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.22
CLPTM1-209ENST00000588855 K7ERS5 55 aa7.35□□□□□ -1.23
CLPTM1-209ENST00000588855 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
CLPTM1-209ENST00000588855 PRO0628Q9UI54 55 aa7.34□□□□□ -1.23
CLPTM1-209ENST00000588855 MDN1Q9NU22 5596 aa7.33□□□□□ -1.24
CLPTM1-209ENST00000588855 NEBP20929 6669 aa7.3□□□□□ -1.24
CLPTM1-209ENST00000588855 TNP1P09430 55 aa7.27□□□□□ -1.25
CLPTM1-209ENST00000588855 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
CLPTM1-209ENST00000588855 SPRR2EP22531 72 aa7.12□□□□□ -1.27
CLPTM1-209ENST00000588855 SPRR2BP35325 72 aa7.12□□□□□ -1.27
CLPTM1-209ENST00000588855 SPRR2AP35326 72 aa7.12□□□□□ -1.27
CLPTM1-209ENST00000588855 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
CLPTM1-209ENST00000588855 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
CLPTM1-209ENST00000588855 LCE1AQ5T7P2 110 aa7.09□□□□□ -1.27
CLPTM1-209ENST00000588855 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
CLPTM1-209ENST00000588855 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
CLPTM1-209ENST00000588855 MT1EP04732 61 aa7.02□□□□□ -1.29
CLPTM1-209ENST00000588855 BRK1Q8WUW1 75 aa7□□□□□ -1.29
CLPTM1-209ENST00000588855 ROMO1P60602 79 aa6.96□□□□□ -1.29
CLPTM1-209ENST00000588855 PMAIP1Q13794 54 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms