RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 NISCHQ9Y2I1 1504 aa45.46■■■■■ 4.87
CLPTM1-209ENST00000588855 CCDC180Q9P1Z9 1646 aa40.27■■■■■ 4.04
CLPTM1-209ENST00000588855 ABCC9O60706 1549 aa38.98■■■■□ 3.83
CLPTM1-209ENST00000588855 ZCCHC6Q5VYS8 1495 aaKnown RBP37.99■■■■□ 3.67
CLPTM1-209ENST00000588855 DCAF8L2P0C7V8 631 aa37.76■■■■□ 3.63
CLPTM1-209ENST00000588855 NACADO15069 1562 aa37.71■■■■□ 3.63
CLPTM1-209ENST00000588855 RB1CC1Q8TDY2 1594 aa37.66■■■■□ 3.62
CLPTM1-209ENST00000588855 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
CLPTM1-209ENST00000588855 MYO15BQ96JP2 1530 aa37.6■■■■□ 3.61
CLPTM1-209ENST00000588855 UNC13AQ9UPW8 1703 aa36.93■■■■□ 3.5
CLPTM1-209ENST00000588855 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
CLPTM1-209ENST00000588855 BICRAQ9NZM4 1560 aa36.55■■■■□ 3.44
CLPTM1-209ENST00000588855 PABPN1Q86U42 306 aaKnown RBP eCLIP36.45■■■■□ 3.43
CLPTM1-209ENST00000588855 SHROOM4Q9ULL8 1493 aa36.19■■■■□ 3.38
CLPTM1-209ENST00000588855 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
CLPTM1-209ENST00000588855 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
CLPTM1-209ENST00000588855 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
CLPTM1-209ENST00000588855 CC2D2AQ9P2K1 1620 aa35.3■■■■□ 3.24
CLPTM1-209ENST00000588855 SMARCA4P51532 1647 aa35.23■■■■□ 3.23
CLPTM1-209ENST00000588855 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
CLPTM1-209ENST00000588855 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.21
CLPTM1-209ENST00000588855 ATAD2BQ9ULI0 1458 aa34.88■■■■□ 3.17
CLPTM1-209ENST00000588855 SMARCA2P51531 1590 aa34.86■■■■□ 3.17
CLPTM1-209ENST00000588855 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
CLPTM1-209ENST00000588855 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
CLPTM1-209ENST00000588855 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
CLPTM1-209ENST00000588855 WIZO95785 1651 aa34.75■■■■□ 3.15
CLPTM1-209ENST00000588855 HMGXB3Q12766 1538 aa34.68■■■■□ 3.14
CLPTM1-209ENST00000588855 BAZ1BQ9UIG0 1483 aaKnown RBP34.62■■■■□ 3.13
CLPTM1-209ENST00000588855 TOP2AP11388 1531 aaKnown RBP34.37■■■■□ 3.09
CLPTM1-209ENST00000588855 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
CLPTM1-209ENST00000588855 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.02
CLPTM1-209ENST00000588855 NESP48681 1621 aa33.88■■■■□ 3.01
CLPTM1-209ENST00000588855 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
CLPTM1-209ENST00000588855 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
CLPTM1-209ENST00000588855 CFTRP13569 1480 aa33.69■■■□□ 2.98
CLPTM1-209ENST00000588855 PRDM2Q13029 1718 aa33.57■■■□□ 2.97
CLPTM1-209ENST00000588855 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
CLPTM1-209ENST00000588855 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
CLPTM1-209ENST00000588855 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
CLPTM1-209ENST00000588855 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
CLPTM1-209ENST00000588855 CEP164Q9UPV0 1460 aa33.35■■■□□ 2.93
CLPTM1-209ENST00000588855 THOC2Q8NI27 1593 aaKnown RBP33.29■■■□□ 2.92
CLPTM1-209ENST00000588855 MRC2Q9UBG0 1479 aa33.2■■■□□ 2.91
CLPTM1-209ENST00000588855 WDR62O43379 1518 aa33.1■■■□□ 2.89
CLPTM1-209ENST00000588855 URB2Q14146 1524 aaKnown RBP33.09■■■□□ 2.89
CLPTM1-209ENST00000588855 CUX2O14529 1486 aa33.01■■■□□ 2.88
CLPTM1-209ENST00000588855 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
CLPTM1-209ENST00000588855 TOPBP1Q92547 1522 aa32.95■■■□□ 2.87
CLPTM1-209ENST00000588855 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
CLPTM1-209ENST00000588855 CUX1P39880 1505 aa32.88■■■□□ 2.85
CLPTM1-209ENST00000588855 WRNQ14191 1432 aaPredicted RBP eCLIP32.79■■■□□ 2.84
CLPTM1-209ENST00000588855 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
CLPTM1-209ENST00000588855 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
CLPTM1-209ENST00000588855 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
CLPTM1-209ENST00000588855 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
CLPTM1-209ENST00000588855 FGD5Q6ZNL6 1462 aa32.69■■■□□ 2.82
CLPTM1-209ENST00000588855 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
CLPTM1-209ENST00000588855 TARBP1Q13395 1621 aaKnown RBP32.58■■■□□ 2.81
CLPTM1-209ENST00000588855 RAD54L2Q9Y4B4 1467 aa32.56■■■□□ 2.8
CLPTM1-209ENST00000588855 SOGA1O94964 1423 aa32.53■■■□□ 2.8
CLPTM1-209ENST00000588855 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
CLPTM1-209ENST00000588855 WDR97A6NE52 1622 aa32.46■■■□□ 2.79
CLPTM1-209ENST00000588855 EIF4G3O43432 1585 aaKnown RBP32.4■■■□□ 2.78
CLPTM1-209ENST00000588855 ABCA10Q8WWZ4 1543 aa32.38■■■□□ 2.77
CLPTM1-209ENST00000588855 TDRD9Q8NDG6 1382 aaKnown RBP32.31■■■□□ 2.76
CLPTM1-209ENST00000588855 AQRO60306 1485 aaKnown RBP eCLIP32.31■■■□□ 2.763e-8■■■■■ 43.2
CLPTM1-209ENST00000588855 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
CLPTM1-209ENST00000588855 TRIM41Q8WV44 630 aa32.26■■■□□ 2.75
CLPTM1-209ENST00000588855 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
CLPTM1-209ENST00000588855 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
CLPTM1-209ENST00000588855 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
CLPTM1-209ENST00000588855 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
CLPTM1-209ENST00000588855 SNAPC4Q5SXM2 1469 aa32.05■■■□□ 2.72
CLPTM1-209ENST00000588855 KIF27Q86VH2 1401 aa32.05■■■□□ 2.72
CLPTM1-209ENST00000588855 MAGI1Q96QZ7 1491 aaPredicted RBP31.99■■■□□ 2.71
CLPTM1-209ENST00000588855 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
CLPTM1-209ENST00000588855 RUSC2Q8N2Y8 1516 aa31.95■■■□□ 2.71
CLPTM1-209ENST00000588855 CHD1O14646 1710 aa31.93■■■□□ 2.7
CLPTM1-209ENST00000588855 ADAMTS12P58397 1594 aa31.93■■■□□ 2.7
CLPTM1-209ENST00000588855 SYNJ2O15056 1496 aa31.86■■■□□ 2.69
CLPTM1-209ENST00000588855 IGF1RP08069 1367 aa31.86■■■□□ 2.69
CLPTM1-209ENST00000588855 CUL7Q14999 1698 aa31.82■■■□□ 2.68
CLPTM1-209ENST00000588855 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
CLPTM1-209ENST00000588855 FBLN2P98095 1184 aa31.81■■■□□ 2.68
CLPTM1-209ENST00000588855 CHMP7Q8WUX9 453 aaPredicted RBP31.77■■■□□ 2.68
CLPTM1-209ENST00000588855 GRIN2AQ12879 1464 aa31.73■■■□□ 2.67
CLPTM1-209ENST00000588855 EEA1Q15075 1411 aa31.7■■■□□ 2.67
CLPTM1-209ENST00000588855 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
CLPTM1-209ENST00000588855 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
CLPTM1-209ENST00000588855 FAM9AQ8IZU1 332 aaPredicted RBP31.62■■■□□ 2.65
CLPTM1-209ENST00000588855 CEP170Q5SW79 1584 aa31.59■■■□□ 2.65
CLPTM1-209ENST00000588855 CSRNP3Q8WYN3 585 aa31.59■■■□□ 2.65
CLPTM1-209ENST00000588855 PRXQ9BXM0 1461 aa31.56■■■□□ 2.64
CLPTM1-209ENST00000588855 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
CLPTM1-209ENST00000588855 NUP160Q12769 1436 aa31.55■■■□□ 2.64
CLPTM1-209ENST00000588855 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
CLPTM1-209ENST00000588855 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.63
CLPTM1-209ENST00000588855 KIF21BO75037 1637 aa31.42■■■□□ 2.62
CLPTM1-209ENST00000588855 CTTNBP2Q8WZ74 1663 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms