RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
NEDD4L-223ENST00000588516 RETNLBQ9BQ08 111 aa7.88□□□□□ -1.15
NEDD4L-223ENST00000588516 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
NEDD4L-223ENST00000588516 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
NEDD4L-223ENST00000588516 SPINK7P58062 85 aa7.83□□□□□ -1.16
NEDD4L-223ENST00000588516 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
NEDD4L-223ENST00000588516 A6NN06 94 aa7.79□□□□□ -1.16
NEDD4L-223ENST00000588516 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
NEDD4L-223ENST00000588516 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
NEDD4L-223ENST00000588516 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
NEDD4L-223ENST00000588516 A8MU10 97 aa7.78□□□□□ -1.16
NEDD4L-223ENST00000588516 UQCR11O14957 56 aa7.78□□□□□ -1.16
NEDD4L-223ENST00000588516 LRP2P98164 4655 aa7.76□□□□□ -1.17
NEDD4L-223ENST00000588516 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
NEDD4L-223ENST00000588516 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
NEDD4L-223ENST00000588516 A8MUU9 505 aa7.75□□□□□ -1.17
NEDD4L-223ENST00000588516 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
NEDD4L-223ENST00000588516 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
NEDD4L-223ENST00000588516 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
NEDD4L-223ENST00000588516 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
NEDD4L-223ENST00000588516 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
NEDD4L-223ENST00000588516 C9orf92A6NGG3 77 aa7.59□□□□□ -1.19
NEDD4L-223ENST00000588516 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
NEDD4L-223ENST00000588516 TNXBP22105 4242 aa7.55□□□□□ -1.2
NEDD4L-223ENST00000588516 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
NEDD4L-223ENST00000588516 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
NEDD4L-223ENST00000588516 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.21
NEDD4L-223ENST00000588516 A0A1B0GU33 70 aa7.46□□□□□ -1.22
NEDD4L-223ENST00000588516 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
NEDD4L-223ENST00000588516 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
NEDD4L-223ENST00000588516 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
NEDD4L-223ENST00000588516 K7ERS5 55 aa7.41□□□□□ -1.22
NEDD4L-223ENST00000588516 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
NEDD4L-223ENST00000588516 KRTAP9-9Q9BYP9 154 aa7.39□□□□□ -1.23
NEDD4L-223ENST00000588516 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
NEDD4L-223ENST00000588516 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
NEDD4L-223ENST00000588516 LPAP08519 4548 aa7.35□□□□□ -1.23
NEDD4L-223ENST00000588516 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
NEDD4L-223ENST00000588516 H0YAA0 97 aa7.32□□□□□ -1.24
NEDD4L-223ENST00000588516 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
NEDD4L-223ENST00000588516 PRAC1Q96KF2 57 aa7.27□□□□□ -1.24
NEDD4L-223ENST00000588516 MUC2Q02817 5179 aa7.26□□□□□ -1.25
NEDD4L-223ENST00000588516 S4R3F8 94 aa7.26□□□□□ -1.25
NEDD4L-223ENST00000588516 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
NEDD4L-223ENST00000588516 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
NEDD4L-223ENST00000588516 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
NEDD4L-223ENST00000588516 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
NEDD4L-223ENST00000588516 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
NEDD4L-223ENST00000588516 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
NEDD4L-223ENST00000588516 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
NEDD4L-223ENST00000588516 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
NEDD4L-223ENST00000588516 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
NEDD4L-223ENST00000588516 ROMO1P60602 79 aa7.07□□□□□ -1.28
NEDD4L-223ENST00000588516 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
NEDD4L-223ENST00000588516 M0QZ58 72 aa7□□□□□ -1.29
NEDD4L-223ENST00000588516 H3BS24 57 aa6.95□□□□□ -1.3
NEDD4L-223ENST00000588516 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
NEDD4L-223ENST00000588516 A0A0D9SG42 100 aa6.94□□□□□ -1.3
NEDD4L-223ENST00000588516 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
NEDD4L-223ENST00000588516 P0C880 135 aa6.91□□□□□ -1.3
NEDD4L-223ENST00000588516 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
NEDD4L-223ENST00000588516 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
NEDD4L-223ENST00000588516 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
NEDD4L-223ENST00000588516 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
NEDD4L-223ENST00000588516 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
NEDD4L-223ENST00000588516 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
NEDD4L-223ENST00000588516 KRTAP12-1P59990 96 aa6.77□□□□□ -1.32
NEDD4L-223ENST00000588516 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
NEDD4L-223ENST00000588516 R4GN34 69 aa6.73□□□□□ -1.33
NEDD4L-223ENST00000588516 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
NEDD4L-223ENST00000588516 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
NEDD4L-223ENST00000588516 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
NEDD4L-223ENST00000588516 MT1HP80294 61 aa6.55□□□□□ -1.36
NEDD4L-223ENST00000588516 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
NEDD4L-223ENST00000588516 M0R2T5 61 aa6.48□□□□□ -1.37
NEDD4L-223ENST00000588516 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
NEDD4L-223ENST00000588516 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
NEDD4L-223ENST00000588516 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
NEDD4L-223ENST00000588516 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
NEDD4L-223ENST00000588516 SSPOA2VEC9 5147 aa6.35□□□□□ -1.39
NEDD4L-223ENST00000588516 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
NEDD4L-223ENST00000588516 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
NEDD4L-223ENST00000588516 USH2AO75445 5202 aa6.27□□□□□ -1.41
NEDD4L-223ENST00000588516 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
NEDD4L-223ENST00000588516 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
NEDD4L-223ENST00000588516 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
NEDD4L-223ENST00000588516 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
NEDD4L-223ENST00000588516 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
NEDD4L-223ENST00000588516 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
NEDD4L-223ENST00000588516 TNP1P09430 55 aa6.21□□□□□ -1.42
NEDD4L-223ENST00000588516 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
NEDD4L-223ENST00000588516 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
NEDD4L-223ENST00000588516 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
NEDD4L-223ENST00000588516 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
NEDD4L-223ENST00000588516 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
NEDD4L-223ENST00000588516 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
NEDD4L-223ENST00000588516 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
NEDD4L-223ENST00000588516 MT2AP02795 61 aa5.95□□□□□ -1.46
NEDD4L-223ENST00000588516 NEBP20929 6669 aa5.92□□□□□ -1.46
NEDD4L-223ENST00000588516 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms