RNA–Protein interactions for RNA: ENST00000586400.5

TMEM235-205, Transcript of transmembrane protein 235, humanhuman

TSL 1 (best) BASIC

Gene TMEM235, Length 2,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-205ENST00000586400 SEC61GP60059 68 aa11.35□□□□□ -0.59
TMEM235-205ENST00000586400 KTN1-AS1Q86SY8 53 aa11.29□□□□□ -0.6
TMEM235-205ENST00000586400 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
TMEM235-205ENST00000586400 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
TMEM235-205ENST00000586400 LPAP08519 4548 aa11.19□□□□□ -0.62
TMEM235-205ENST00000586400 LRP2P98164 4655 aa11.17□□□□□ -0.62
TMEM235-205ENST00000586400 H0YAA0 97 aa11.16□□□□□ -0.62
TMEM235-205ENST00000586400 A0A1B0GU33 70 aa11.15□□□□□ -0.62
TMEM235-205ENST00000586400 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
TMEM235-205ENST00000586400 H1FX-AS1Q4G0G2 97 aa11.12□□□□□ -0.63
TMEM235-205ENST00000586400 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
TMEM235-205ENST00000586400 S4R3F8 94 aa11.04□□□□□ -0.64
TMEM235-205ENST00000586400 KRTAP10-6P60371 365 aaPredicted RBP10.99□□□□□ -0.65
TMEM235-205ENST00000586400 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.66
TMEM235-205ENST00000586400 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
TMEM235-205ENST00000586400 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
TMEM235-205ENST00000586400 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
TMEM235-205ENST00000586400 KRTAP13-4Q3LI77 160 aa10.82□□□□□ -0.68
TMEM235-205ENST00000586400 HERC2O95714 4834 aa10.8□□□□□ -0.68
TMEM235-205ENST00000586400 P0C880 135 aa10.79□□□□□ -0.68
TMEM235-205ENST00000586400 MUC17Q685J3 4493 aa10.73□□□□□ -0.69
TMEM235-205ENST00000586400 J3QL48 77 aa10.72□□□□□ -0.69
TMEM235-205ENST00000586400 CSAG1Q6PB30 78 aa10.69□□□□□ -0.7
TMEM235-205ENST00000586400 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
TMEM235-205ENST00000586400 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
TMEM235-205ENST00000586400 A0A0D9SG42 100 aa10.63□□□□□ -0.71
TMEM235-205ENST00000586400 K7ERS5 55 aa10.63□□□□□ -0.71
TMEM235-205ENST00000586400 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
TMEM235-205ENST00000586400 KRTAP19-2Q3LHN2 52 aa10.46□□□□□ -0.74
TMEM235-205ENST00000586400 KRTAP12-2P59991 146 aa10.43□□□□□ -0.74
TMEM235-205ENST00000586400 M0QZ58 72 aa10.42□□□□□ -0.74
TMEM235-205ENST00000586400 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
TMEM235-205ENST00000586400 ROMO1P60602 79 aa10.4□□□□□ -0.74
TMEM235-205ENST00000586400 KRTAP25-1Q3LHN0 102 aa10.38□□□□□ -0.75
TMEM235-205ENST00000586400 KRTAP12-1P59990 96 aa10.38□□□□□ -0.75
TMEM235-205ENST00000586400 CRIPTQ9P021 101 aa10.33□□□□□ -0.76
TMEM235-205ENST00000586400 MUC2Q02817 5179 aa10.33□□□□□ -0.76
TMEM235-205ENST00000586400 SPINT4Q6UDR6 99 aa10.3□□□□□ -0.76
TMEM235-205ENST00000586400 HERC1Q15751 4861 aa10.29□□□□□ -0.76
TMEM235-205ENST00000586400 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
TMEM235-205ENST00000586400 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
TMEM235-205ENST00000586400 R4GN34 69 aa10.22□□□□□ -0.77
TMEM235-205ENST00000586400 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
TMEM235-205ENST00000586400 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
TMEM235-205ENST00000586400 C10orf95Q9H7T3 257 aa10.04□□□□□ -0.8
TMEM235-205ENST00000586400 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
TMEM235-205ENST00000586400 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
TMEM235-205ENST00000586400 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
TMEM235-205ENST00000586400 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
TMEM235-205ENST00000586400 MT1HP80294 61 aa9.63□□□□□ -0.87
TMEM235-205ENST00000586400 CAMK2N1Q7Z7J9 78 aa9.63□□□□□ -0.87
TMEM235-205ENST00000586400 M0R2T5 61 aa9.55□□□□□ -0.88
TMEM235-205ENST00000586400 SPRR2GQ9BYE4 73 aa9.52□□□□□ -0.89
TMEM235-205ENST00000586400 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
TMEM235-205ENST00000586400 KRTAP15-1Q3LI76 137 aa9.43□□□□□ -0.9
TMEM235-205ENST00000586400 MT2AP02795 61 aa9.41□□□□□ -0.9
TMEM235-205ENST00000586400 MT1FP04733 61 aa9.41□□□□□ -0.9
TMEM235-205ENST00000586400 KRTAP9-8Q9BYQ0 159 aa9.4□□□□□ -0.9
TMEM235-205ENST00000586400 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
TMEM235-205ENST00000586400 PP632Q6XCG6 107 aa9.3□□□□□ -0.92
TMEM235-205ENST00000586400 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
TMEM235-205ENST00000586400 TNP1P09430 55 aa9.26□□□□□ -0.93
TMEM235-205ENST00000586400 KRTAP19-8Q3LI54 63 aa9.15□□□□□ -0.95
TMEM235-205ENST00000586400 H3BS24 57 aa9.14□□□□□ -0.95
TMEM235-205ENST00000586400 KRTAP23-1A1A580 65 aa9.12□□□□□ -0.95
TMEM235-205ENST00000586400 MT1BP07438 61 aa9.05□□□□□ -0.96
TMEM235-205ENST00000586400 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
TMEM235-205ENST00000586400 NDUFAF8A1L188 74 aa9□□□□□ -0.97
TMEM235-205ENST00000586400 KRTAP10-5P60370 271 aa8.92□□□□□ -0.98
TMEM235-205ENST00000586400 MT1XP80297 61 aa8.91□□□□□ -0.98
TMEM235-205ENST00000586400 LCE3AQ5TA76 89 aa8.85□□□□□ -0.99
TMEM235-205ENST00000586400 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
TMEM235-205ENST00000586400 LCE2BO14633 110 aa8.7□□□□□ -1.02
TMEM235-205ENST00000586400 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
TMEM235-205ENST00000586400 SPRR5A0A1B0GTR4 108 aa8.64□□□□□ -1.03
TMEM235-205ENST00000586400 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
TMEM235-205ENST00000586400 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
TMEM235-205ENST00000586400 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
TMEM235-205ENST00000586400 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
TMEM235-205ENST00000586400 USH2AO75445 5202 aa8.5□□□□□ -1.05
TMEM235-205ENST00000586400 KRTAP12-3P60328 96 aa8.44□□□□□ -1.06
TMEM235-205ENST00000586400 KMT2DO14686 5537 aa8.22□□□□□ -1.09
TMEM235-205ENST00000586400 KRTAP19-5Q3LI72 72 aa8.2□□□□□ -1.1
TMEM235-205ENST00000586400 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
TMEM235-205ENST00000586400 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
TMEM235-205ENST00000586400 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
TMEM235-205ENST00000586400 KRTAP19-7Q3SYF9 63 aa7.95□□□□□ -1.14
TMEM235-205ENST00000586400 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
TMEM235-205ENST00000586400 LCE3CQ5T5A8 94 aa7.94□□□□□ -1.14
TMEM235-205ENST00000586400 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
TMEM235-205ENST00000586400 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
TMEM235-205ENST00000586400 MT1EP04732 61 aa7.73□□□□□ -1.17
TMEM235-205ENST00000586400 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
TMEM235-205ENST00000586400 MT1LQ93083 61 aa7.68□□□□□ -1.18
TMEM235-205ENST00000586400 KRTAP9-6A8MVA2 160 aa7.67□□□□□ -1.18
TMEM235-205ENST00000586400 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
TMEM235-205ENST00000586400 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
TMEM235-205ENST00000586400 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
TMEM235-205ENST00000586400 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
TMEM235-205ENST00000586400 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms