RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 H1FX-AS1Q4G0G2 97 aa6.59□□□□□ -1.35
CDK5RAP3-232ENST00000584168 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
CDK5RAP3-232ENST00000584168 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
CDK5RAP3-232ENST00000584168 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
CDK5RAP3-232ENST00000584168 KRTAP17-1Q9BYP8 105 aa6.53□□□□□ -1.36
CDK5RAP3-232ENST00000584168 HSPG2P98160 4391 aa6.48□□□□□ -1.37
CDK5RAP3-232ENST00000584168 RYR1P21817 5038 aa6.46□□□□□ -1.38
CDK5RAP3-232ENST00000584168 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-232ENST00000584168 Q8N1X5 172 aa6.44□□□□□ -1.38
CDK5RAP3-232ENST00000584168 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
CDK5RAP3-232ENST00000584168 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
CDK5RAP3-232ENST00000584168 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
CDK5RAP3-232ENST00000584168 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
CDK5RAP3-232ENST00000584168 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
CDK5RAP3-232ENST00000584168 Q5VSD8 79 aa6.39□□□□□ -1.39
CDK5RAP3-232ENST00000584168 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
CDK5RAP3-232ENST00000584168 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
CDK5RAP3-232ENST00000584168 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
CDK5RAP3-232ENST00000584168 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
CDK5RAP3-232ENST00000584168 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-232ENST00000584168 HERC2O95714 4834 aa6.26□□□□□ -1.41
CDK5RAP3-232ENST00000584168 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
CDK5RAP3-232ENST00000584168 A0A0D9SG42 100 aa6.22□□□□□ -1.41
CDK5RAP3-232ENST00000584168 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
CDK5RAP3-232ENST00000584168 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.41
CDK5RAP3-232ENST00000584168 TNXBP22105 4242 aa6.19□□□□□ -1.42
CDK5RAP3-232ENST00000584168 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
CDK5RAP3-232ENST00000584168 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
CDK5RAP3-232ENST00000584168 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
CDK5RAP3-232ENST00000584168 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
CDK5RAP3-232ENST00000584168 XP32Q5T750 250 aa6.12□□□□□ -1.43
CDK5RAP3-232ENST00000584168 S4R3F8 94 aa6.12□□□□□ -1.43
CDK5RAP3-232ENST00000584168 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
CDK5RAP3-232ENST00000584168 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
CDK5RAP3-232ENST00000584168 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
CDK5RAP3-232ENST00000584168 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
CDK5RAP3-232ENST00000584168 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
CDK5RAP3-232ENST00000584168 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
CDK5RAP3-232ENST00000584168 LPAP08519 4548 aa6.03□□□□□ -1.44
CDK5RAP3-232ENST00000584168 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
CDK5RAP3-232ENST00000584168 HERC1Q15751 4861 aa5.99□□□□□ -1.45
CDK5RAP3-232ENST00000584168 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
CDK5RAP3-232ENST00000584168 LRP2P98164 4655 aa5.94□□□□□ -1.46
CDK5RAP3-232ENST00000584168 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
CDK5RAP3-232ENST00000584168 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
CDK5RAP3-232ENST00000584168 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
CDK5RAP3-232ENST00000584168 MUC2Q02817 5179 aa5.8□□□□□ -1.48
CDK5RAP3-232ENST00000584168 R4GN34 69 aa5.77□□□□□ -1.49
CDK5RAP3-232ENST00000584168 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
CDK5RAP3-232ENST00000584168 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
CDK5RAP3-232ENST00000584168 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
CDK5RAP3-232ENST00000584168 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
CDK5RAP3-232ENST00000584168 INE1O15225 51 aa5.63□□□□□ -1.51
CDK5RAP3-232ENST00000584168 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
CDK5RAP3-232ENST00000584168 M0QZ58 72 aa5.61□□□□□ -1.51
CDK5RAP3-232ENST00000584168 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
CDK5RAP3-232ENST00000584168 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
CDK5RAP3-232ENST00000584168 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
CDK5RAP3-232ENST00000584168 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
CDK5RAP3-232ENST00000584168 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
CDK5RAP3-232ENST00000584168 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
CDK5RAP3-232ENST00000584168 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
CDK5RAP3-232ENST00000584168 M0R2T5 61 aa5.2□□□□□ -1.58
CDK5RAP3-232ENST00000584168 MT1HP80294 61 aa5.16□□□□□ -1.58
CDK5RAP3-232ENST00000584168 TNP1P09430 55 aa5.06□□□□□ -1.6
CDK5RAP3-232ENST00000584168 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
CDK5RAP3-232ENST00000584168 MT1FP04733 61 aa4.97□□□□□ -1.61
CDK5RAP3-232ENST00000584168 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
CDK5RAP3-232ENST00000584168 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
CDK5RAP3-232ENST00000584168 MT2AP02795 61 aa4.96□□□□□ -1.62
CDK5RAP3-232ENST00000584168 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
CDK5RAP3-232ENST00000584168 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
CDK5RAP3-232ENST00000584168 USH2AO75445 5202 aa4.88□□□□□ -1.63
CDK5RAP3-232ENST00000584168 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
CDK5RAP3-232ENST00000584168 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
CDK5RAP3-232ENST00000584168 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
CDK5RAP3-232ENST00000584168 LCE2BO14633 110 aa4.71□□□□□ -1.65
CDK5RAP3-232ENST00000584168 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
CDK5RAP3-232ENST00000584168 MT1BP07438 61 aa4.66□□□□□ -1.66
CDK5RAP3-232ENST00000584168 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
CDK5RAP3-232ENST00000584168 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
CDK5RAP3-232ENST00000584168 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
CDK5RAP3-232ENST00000584168 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
CDK5RAP3-232ENST00000584168 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
CDK5RAP3-232ENST00000584168 KMT2DO14686 5537 aa4.51□□□□□ -1.69
CDK5RAP3-232ENST00000584168 MT1XP80297 61 aa4.5□□□□□ -1.69
CDK5RAP3-232ENST00000584168 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
CDK5RAP3-232ENST00000584168 KRTAP19-6Q3LI70 58 aa4.41□□□□□ -1.7
CDK5RAP3-232ENST00000584168 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
CDK5RAP3-232ENST00000584168 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.7
CDK5RAP3-232ENST00000584168 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
CDK5RAP3-232ENST00000584168 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
CDK5RAP3-232ENST00000584168 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
CDK5RAP3-232ENST00000584168 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
CDK5RAP3-232ENST00000584168 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
CDK5RAP3-232ENST00000584168 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
CDK5RAP3-232ENST00000584168 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
CDK5RAP3-232ENST00000584168 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
CDK5RAP3-232ENST00000584168 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
CDK5RAP3-232ENST00000584168 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms