RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
CDK5RAP3-232ENST00000584168 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
CDK5RAP3-232ENST00000584168 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
CDK5RAP3-232ENST00000584168 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
CDK5RAP3-232ENST00000584168 MYT1Q01538 1121 aa20.75■□□□□ 0.91
CDK5RAP3-232ENST00000584168 ABCC9O60706 1549 aa20.63■□□□□ 0.89
CDK5RAP3-232ENST00000584168 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
CDK5RAP3-232ENST00000584168 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
CDK5RAP3-232ENST00000584168 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
CDK5RAP3-232ENST00000584168 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
CDK5RAP3-232ENST00000584168 NACADO15069 1562 aa20.22■□□□□ 0.83
CDK5RAP3-232ENST00000584168 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
CDK5RAP3-232ENST00000584168 HRCP23327 699 aa19.89■□□□□ 0.78
CDK5RAP3-232ENST00000584168 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
CDK5RAP3-232ENST00000584168 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
CDK5RAP3-232ENST00000584168 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
CDK5RAP3-232ENST00000584168 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-232ENST00000584168 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.722e-10■■□□□ 14.3
CDK5RAP3-232ENST00000584168 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-232ENST00000584168 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
CDK5RAP3-232ENST00000584168 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-232ENST00000584168 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-232ENST00000584168 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
CDK5RAP3-232ENST00000584168 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
CDK5RAP3-232ENST00000584168 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-232ENST00000584168 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-232ENST00000584168 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
CDK5RAP3-232ENST00000584168 ERICH6Q7L0X2 663 aa19■□□□□ 0.63
CDK5RAP3-232ENST00000584168 SMARCA4P51532 1647 aa18.98■□□□□ 0.63
CDK5RAP3-232ENST00000584168 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-232ENST00000584168 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-232ENST00000584168 APLP2Q06481 763 aa18.9■□□□□ 0.62
CDK5RAP3-232ENST00000584168 WIZO95785 1651 aa18.84■□□□□ 0.61
CDK5RAP3-232ENST00000584168 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
CDK5RAP3-232ENST00000584168 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
CDK5RAP3-232ENST00000584168 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
CDK5RAP3-232ENST00000584168 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
CDK5RAP3-232ENST00000584168 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
CDK5RAP3-232ENST00000584168 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
CDK5RAP3-232ENST00000584168 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-232ENST00000584168 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-232ENST00000584168 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
CDK5RAP3-232ENST00000584168 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-232ENST00000584168 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
CDK5RAP3-232ENST00000584168 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
CDK5RAP3-232ENST00000584168 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
CDK5RAP3-232ENST00000584168 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
CDK5RAP3-232ENST00000584168 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
CDK5RAP3-232ENST00000584168 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
CDK5RAP3-232ENST00000584168 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
CDK5RAP3-232ENST00000584168 ZEB1P37275 1124 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-232ENST00000584168 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
CDK5RAP3-232ENST00000584168 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
CDK5RAP3-232ENST00000584168 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
CDK5RAP3-232ENST00000584168 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
CDK5RAP3-232ENST00000584168 CFTRP13569 1480 aa18.14■□□□□ 0.49
CDK5RAP3-232ENST00000584168 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
CDK5RAP3-232ENST00000584168 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
CDK5RAP3-232ENST00000584168 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
CDK5RAP3-232ENST00000584168 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
CDK5RAP3-232ENST00000584168 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
CDK5RAP3-232ENST00000584168 NESP48681 1621 aa18.01■□□□□ 0.47
CDK5RAP3-232ENST00000584168 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
CDK5RAP3-232ENST00000584168 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
CDK5RAP3-232ENST00000584168 TRIM26Q12899 539 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-232ENST00000584168 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
CDK5RAP3-232ENST00000584168 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
CDK5RAP3-232ENST00000584168 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-232ENST00000584168 SOGA1O94964 1423 aa17.84■□□□□ 0.45
CDK5RAP3-232ENST00000584168 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
CDK5RAP3-232ENST00000584168 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
CDK5RAP3-232ENST00000584168 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
CDK5RAP3-232ENST00000584168 EIF5BO60841 1220 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-232ENST00000584168 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-232ENST00000584168 ERCC6Q03468 1493 aa17.77■□□□□ 0.43
CDK5RAP3-232ENST00000584168 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
CDK5RAP3-232ENST00000584168 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
CDK5RAP3-232ENST00000584168 CUX1P39880 1505 aa17.76■□□□□ 0.43
CDK5RAP3-232ENST00000584168 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
CDK5RAP3-232ENST00000584168 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
CDK5RAP3-232ENST00000584168 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
CDK5RAP3-232ENST00000584168 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.42
CDK5RAP3-232ENST00000584168 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
CDK5RAP3-232ENST00000584168 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-232ENST00000584168 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-232ENST00000584168 WDR62O43379 1518 aa17.65■□□□□ 0.42
CDK5RAP3-232ENST00000584168 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-232ENST00000584168 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
CDK5RAP3-232ENST00000584168 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
CDK5RAP3-232ENST00000584168 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-232ENST00000584168 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-232ENST00000584168 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
CDK5RAP3-232ENST00000584168 CUX2O14529 1486 aa17.49■□□□□ 0.39
CDK5RAP3-232ENST00000584168 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
CDK5RAP3-232ENST00000584168 EEA1Q15075 1411 aa17.48■□□□□ 0.39
CDK5RAP3-232ENST00000584168 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
CDK5RAP3-232ENST00000584168 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-232ENST00000584168 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-232ENST00000584168 IFT140Q96RY7 1462 aa17.46■□□□□ 0.39
CDK5RAP3-232ENST00000584168 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms