RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
TRAPPC8-211ENST00000582539 PKD1P98161 4303 aa4.92□□□□□ -1.62
TRAPPC8-211ENST00000582539 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
TRAPPC8-211ENST00000582539 SRRM2Q9UQ35 2752 aaKnown RBP4.91□□□□□ -1.62
TRAPPC8-211ENST00000582539 PLAC4Q8WY50 150 aa4.9□□□□□ -1.62
TRAPPC8-211ENST00000582539 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.62
TRAPPC8-211ENST00000582539 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC8-211ENST00000582539 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
TRAPPC8-211ENST00000582539 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
TRAPPC8-211ENST00000582539 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
TRAPPC8-211ENST00000582539 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
TRAPPC8-211ENST00000582539 RYR1P21817 5038 aa4.86□□□□□ -1.63
TRAPPC8-211ENST00000582539 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
TRAPPC8-211ENST00000582539 A8MU10 97 aa4.86□□□□□ -1.63
TRAPPC8-211ENST00000582539 P0C880 135 aa4.84□□□□□ -1.63
TRAPPC8-211ENST00000582539 HSPG2P98160 4391 aa4.83□□□□□ -1.64
TRAPPC8-211ENST00000582539 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
TRAPPC8-211ENST00000582539 FAT1Q14517 4588 aa4.83□□□□□ -1.64
TRAPPC8-211ENST00000582539 LYSTQ99698 3801 aa4.83□□□□□ -1.64
TRAPPC8-211ENST00000582539 PKHD1P08F94 4074 aa4.8□□□□□ -1.64
TRAPPC8-211ENST00000582539 TNP1P09430 55 aa4.76□□□□□ -1.65
TRAPPC8-211ENST00000582539 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
TRAPPC8-211ENST00000582539 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
TRAPPC8-211ENST00000582539 HYDINQ4G0P3 5121 aa4.73□□□□□ -1.65
TRAPPC8-211ENST00000582539 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
TRAPPC8-211ENST00000582539 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
TRAPPC8-211ENST00000582539 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
TRAPPC8-211ENST00000582539 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
TRAPPC8-211ENST00000582539 TNXBP22105 4242 aa4.67□□□□□ -1.66
TRAPPC8-211ENST00000582539 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
TRAPPC8-211ENST00000582539 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
TRAPPC8-211ENST00000582539 RYR3Q15413 4870 aa4.65□□□□□ -1.66
TRAPPC8-211ENST00000582539 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
TRAPPC8-211ENST00000582539 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
TRAPPC8-211ENST00000582539 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
TRAPPC8-211ENST00000582539 HERC1Q15751 4861 aa4.59□□□□□ -1.67
TRAPPC8-211ENST00000582539 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
TRAPPC8-211ENST00000582539 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
TRAPPC8-211ENST00000582539 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
TRAPPC8-211ENST00000582539 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
TRAPPC8-211ENST00000582539 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
TRAPPC8-211ENST00000582539 HERC2O95714 4834 aa4.5□□□□□ -1.69
TRAPPC8-211ENST00000582539 LRP1Q07954 4544 aaKnown RBP4.46□□□□□ -1.69
TRAPPC8-211ENST00000582539 MT1HP80294 61 aa4.46□□□□□ -1.7
TRAPPC8-211ENST00000582539 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
TRAPPC8-211ENST00000582539 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
TRAPPC8-211ENST00000582539 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
TRAPPC8-211ENST00000582539 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
TRAPPC8-211ENST00000582539 MT2AP02795 61 aa4.36□□□□□ -1.71
TRAPPC8-211ENST00000582539 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
TRAPPC8-211ENST00000582539 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
TRAPPC8-211ENST00000582539 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-211ENST00000582539 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
TRAPPC8-211ENST00000582539 MT1FP04733 61 aa4.24□□□□□ -1.73
TRAPPC8-211ENST00000582539 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
TRAPPC8-211ENST00000582539 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
TRAPPC8-211ENST00000582539 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.73
TRAPPC8-211ENST00000582539 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
TRAPPC8-211ENST00000582539 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC8-211ENST00000582539 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
TRAPPC8-211ENST00000582539 LRP2P98164 4655 aa4.15□□□□□ -1.75
TRAPPC8-211ENST00000582539 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
TRAPPC8-211ENST00000582539 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
TRAPPC8-211ENST00000582539 PCLOQ9Y6V0 5065 aa4.1□□□□□ -1.75
TRAPPC8-211ENST00000582539 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
TRAPPC8-211ENST00000582539 MT1BP07438 61 aa4.07□□□□□ -1.76
TRAPPC8-211ENST00000582539 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
TRAPPC8-211ENST00000582539 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
TRAPPC8-211ENST00000582539 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
TRAPPC8-211ENST00000582539 KRTAP10-5P60370 271 aa4.04□□□□□ -1.76
TRAPPC8-211ENST00000582539 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC8-211ENST00000582539 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
TRAPPC8-211ENST00000582539 H3BS24 57 aa4□□□□□ -1.77
TRAPPC8-211ENST00000582539 MT1XP80297 61 aa3.99□□□□□ -1.77
TRAPPC8-211ENST00000582539 LPAP08519 4548 aa3.97□□□□□ -1.77
TRAPPC8-211ENST00000582539 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC8-211ENST00000582539 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
TRAPPC8-211ENST00000582539 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
TRAPPC8-211ENST00000582539 RNF213Q63HN8 5207 aa3.84□□□□□ -1.79
TRAPPC8-211ENST00000582539 LCE2BO14633 110 aa3.82□□□□□ -1.8
TRAPPC8-211ENST00000582539 INE1O15225 51 aa3.79□□□□□ -1.8
TRAPPC8-211ENST00000582539 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC8-211ENST00000582539 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
TRAPPC8-211ENST00000582539 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
TRAPPC8-211ENST00000582539 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
TRAPPC8-211ENST00000582539 MT1GP13640 62 aa3.63□□□□□ -1.83
TRAPPC8-211ENST00000582539 MT1EP04732 61 aa3.57□□□□□ -1.84
TRAPPC8-211ENST00000582539 MT1LQ93083 61 aa3.54□□□□□ -1.84
TRAPPC8-211ENST00000582539 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
TRAPPC8-211ENST00000582539 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
TRAPPC8-211ENST00000582539 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
TRAPPC8-211ENST00000582539 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
TRAPPC8-211ENST00000582539 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
TRAPPC8-211ENST00000582539 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
TRAPPC8-211ENST00000582539 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
TRAPPC8-211ENST00000582539 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
TRAPPC8-211ENST00000582539 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
TRAPPC8-211ENST00000582539 MT1MQ8N339 61 aa3.38□□□□□ -1.87
TRAPPC8-211ENST00000582539 SPRR2EP22531 72 aa3.34□□□□□ -1.88
TRAPPC8-211ENST00000582539 SPRR2BP35325 72 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms