RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 SZT2Q5T011 3432 aa0.9□□□□□ -2.26
TRAPPC8-205ENST00000578658 A0A096LNI7 61 aa0.9□□□□□ -2.27
TRAPPC8-205ENST00000578658 ZANQ9Y493 2812 aa0.9□□□□□ -2.27
TRAPPC8-205ENST00000578658 RIF1Q5UIP0 2472 aaKnown RBP0.9□□□□□ -2.27
TRAPPC8-205ENST00000578658 DNAH1Q9P2D7 4330 aa0.9□□□□□ -2.27
TRAPPC8-205ENST00000578658 MXRA5Q9NR99 2828 aa0.89□□□□□ -2.27
TRAPPC8-205ENST00000578658 MAP1BP46821 2468 aaKnown RBP0.89□□□□□ -2.27
TRAPPC8-205ENST00000578658 HUWE1Q7Z6Z7 4374 aaKnown RBP0.89□□□□□ -2.27
TRAPPC8-205ENST00000578658 PCNTO95613 3336 aa0.89□□□□□ -2.27
TRAPPC8-205ENST00000578658 MUC3AQ02505 3323 aa0.89□□□□□ -2.27
TRAPPC8-205ENST00000578658 SETXQ7Z333 2677 aaKnown RBP0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 CSMD1Q96PZ7 3565 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 DEFB110Q30KQ9 67 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 DNAH6Q9C0G6 4158 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 CFAP47Q6ZTR5 3102 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 FAM186AA6NE01 2351 aa0.88□□□□□ -2.27
TRAPPC8-205ENST00000578658 LRRK2Q5S007 2527 aa0.87□□□□□ -2.27
TRAPPC8-205ENST00000578658 DCHS1Q96JQ0 3298 aa0.87□□□□□ -2.27
TRAPPC8-205ENST00000578658 WDFY4Q6ZS81 3184 aa0.87□□□□□ -2.27
TRAPPC8-205ENST00000578658 CMYA5Q8N3K9 4069 aa0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 Q9Y3F1 56 aa0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 MAST4O15021 2626 aa0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 ANKRD11Q6UB99 2663 aaPredicted RBP0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 HRNRQ86YZ3 2850 aaPredicted RBP0.86□□□□□ -2.27
TRAPPC8-205ENST00000578658 NCOR2Q9Y618 2525 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 STAB1Q9NY15 2570 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 H3BNG1 76 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 CUBNO60494 3623 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 FREM2Q5SZK8 3169 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
TRAPPC8-205ENST00000578658 PTPN13Q12923 2485 aa0.84□□□□□ -2.28
TRAPPC8-205ENST00000578658 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
TRAPPC8-205ENST00000578658 TEP1Q99973 2627 aaKnown RBP0.84□□□□□ -2.28
TRAPPC8-205ENST00000578658 PKHD1P08F94 4074 aa0.84□□□□□ -2.28
TRAPPC8-205ENST00000578658 VPS13AQ96RL7 3174 aa0.84□□□□□ -2.28
TRAPPC8-205ENST00000578658 DNAH9Q9NYC9 4486 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 TRRAPQ9Y4A5 3859 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 LAMA3Q16787 3333 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 USP9XQ93008 2570 aaPredicted RBP0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 LRP1Q07954 4544 aaKnown RBP0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 PRM1P04553 51 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 LINC01556Q5JQF7 62 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
TRAPPC8-205ENST00000578658 CFAP46Q8IYW2 2715 aa0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 DNAH17Q9UFH2 4485 aa0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 UBR4Q5T4S7 5183 aa0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 MTORP42345 2549 aa0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 ADGRG4Q8IZF6 3080 aa0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 FLNBO75369 2602 aaKnown RBP0.82□□□□□ -2.28
TRAPPC8-205ENST00000578658 UTRNP46939 3433 aa0.81□□□□□ -2.28
TRAPPC8-205ENST00000578658 A0A096LPF7 62 aa0.81□□□□□ -2.28
TRAPPC8-205ENST00000578658 U3KQA8 63 aa0.81□□□□□ -2.28
TRAPPC8-205ENST00000578658 LPAP08519 4548 aa0.81□□□□□ -2.28
TRAPPC8-205ENST00000578658 SVEP1Q4LDE5 3571 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 VPS13CQ709C8 3753 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 LAMA2P24043 3122 aaKnown RBP0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 TEX15Q9BXT5 2789 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 XIRP2A4UGR9 3374 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 CSMD2Q7Z408 3487 aa0.8□□□□□ -2.28
TRAPPC8-205ENST00000578658 TGP01266 2768 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 USP34Q70CQ2 3546 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 LAMA1P25391 3075 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 ACANP16112 2415 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 ANKHD1Q8IWZ3 2542 aaKnown RBP0.79□□□□□ -2.28
TRAPPC8-205ENST00000578658 PCLOQ9Y6V0 5065 aa0.78□□□□□ -2.28
TRAPPC8-205ENST00000578658 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
TRAPPC8-205ENST00000578658 VCANP13611 3396 aa0.78□□□□□ -2.28
TRAPPC8-205ENST00000578658 LOC400499M0QZD8 3231 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 SPEGQ15772 3267 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 DEFB133Q30KQ1 61 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 KIAA1109Q2LD37 5005 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 MYO18BQ8IUG5 2567 aa0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
TRAPPC8-205ENST00000578658 ACACBO00763 2458 aa0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 DOPEY1Q5JWR5 2465 aa0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 MUC2Q02817 5179 aa0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 SMR3BP02814 79 aaPredicted RBP0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 EP400Q96L91 3159 aa0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 NBEAL1Q6ZS30 2694 aa0.76□□□□□ -2.29
TRAPPC8-205ENST00000578658 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
TRAPPC8-205ENST00000578658 ZFYVE26Q68DK2 2539 aa0.75□□□□□ -2.29
TRAPPC8-205ENST00000578658 EYSQ5T1H1 3165 aa0.75□□□□□ -2.29
TRAPPC8-205ENST00000578658 SONP18583 2426 aaKnown RBP0.75□□□□□ -2.29
TRAPPC8-205ENST00000578658 FAT1Q14517 4588 aa0.74□□□□□ -2.29
TRAPPC8-205ENST00000578658 ASPMQ8IZT6 3477 aa0.74□□□□□ -2.29
TRAPPC8-205ENST00000578658 DYNC1H1Q14204 4646 aaKnown RBP0.74□□□□□ -2.29
TRAPPC8-205ENST00000578658 MT1AP04731 61 aa0.73□□□□□ -2.29
TRAPPC8-205ENST00000578658 KRTAP19-5Q3LI72 72 aa0.73□□□□□ -2.29
TRAPPC8-205ENST00000578658 FLNAP21333 2647 aaKnown RBP0.73□□□□□ -2.29
TRAPPC8-205ENST00000578658 RYR1P21817 5038 aa0.73□□□□□ -2.29
TRAPPC8-205ENST00000578658 FASNP49327 2511 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms