RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 MUC3AQ02505 3323 aa1.8□□□□□ -2.12
BRIP1-202ENST00000577598 HTN3P15516 51 aa1.8□□□□□ -2.12
BRIP1-202ENST00000577598 NOP10Q9NPE3 64 aaKnown RBP1.79□□□□□ -2.12
BRIP1-202ENST00000577598 DMXL2Q8TDJ6 3036 aa1.79□□□□□ -2.12
BRIP1-202ENST00000577598 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
BRIP1-202ENST00000577598 TACC2O95359 2948 aa1.79□□□□□ -2.12
BRIP1-202ENST00000577598 LCE3AQ5TA76 89 aa1.78□□□□□ -2.12
BRIP1-202ENST00000577598 DCHS1Q96JQ0 3298 aa1.78□□□□□ -2.12
BRIP1-202ENST00000577598 KRTAP4-5Q9BYR2 181 aa1.77□□□□□ -2.13
BRIP1-202ENST00000577598 ASPMQ8IZT6 3477 aa1.77□□□□□ -2.13
BRIP1-202ENST00000577598 CENPEQ02224 2701 aa1.77□□□□□ -2.13
BRIP1-202ENST00000577598 BOD1L1Q8NFC6 3051 aa1.77□□□□□ -2.13
BRIP1-202ENST00000577598 KRTAP4-7Q9BYR0 210 aa1.76□□□□□ -2.13
BRIP1-202ENST00000577598 DYNC2H1Q8NCM8 4307 aaKnown RBP1.76□□□□□ -2.13
BRIP1-202ENST00000577598 LRBAP50851 2863 aa1.76□□□□□ -2.13
BRIP1-202ENST00000577598 CLPSL2Q6UWE3 100 aa1.75□□□□□ -2.13
BRIP1-202ENST00000577598 HRNRQ86YZ3 2850 aaPredicted RBP1.75□□□□□ -2.13
BRIP1-202ENST00000577598 CSMD1Q96PZ7 3565 aa1.75□□□□□ -2.13
BRIP1-202ENST00000577598 DNAH1Q9P2D7 4330 aa1.75□□□□□ -2.13
BRIP1-202ENST00000577598 CMYA5Q8N3K9 4069 aa1.75□□□□□ -2.13
BRIP1-202ENST00000577598 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
BRIP1-202ENST00000577598 ALMS1Q8TCU4 4167 aa1.74□□□□□ -2.13
BRIP1-202ENST00000577598 ATMQ13315 3056 aa1.73□□□□□ -2.13
BRIP1-202ENST00000577598 LAMA5O15230 3695 aa1.72□□□□□ -2.13
BRIP1-202ENST00000577598 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
BRIP1-202ENST00000577598 RELNP78509 3460 aa1.72□□□□□ -2.13
BRIP1-202ENST00000577598 PDZD2O15018 2839 aa1.72□□□□□ -2.13
BRIP1-202ENST00000577598 VPS13CQ709C8 3753 aa1.71□□□□□ -2.14
BRIP1-202ENST00000577598 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
BRIP1-202ENST00000577598 TENM4Q6N022 2769 aa1.71□□□□□ -2.14
BRIP1-202ENST00000577598 DNAH7Q8WXX0 4024 aa1.7□□□□□ -2.14
BRIP1-202ENST00000577598 KRTAP21-3Q3LHN1 58 aa1.7□□□□□ -2.14
BRIP1-202ENST00000577598 SVEP1Q4LDE5 3571 aa1.69□□□□□ -2.14
BRIP1-202ENST00000577598 M0R2T5 61 aa1.69□□□□□ -2.14
BRIP1-202ENST00000577598 FRAS1Q86XX4 4008 aa1.68□□□□□ -2.14
BRIP1-202ENST00000577598 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
BRIP1-202ENST00000577598 VPS13DQ5THJ4 4388 aa1.66□□□□□ -2.14
BRIP1-202ENST00000577598 ITPR3Q14573 2671 aa1.66□□□□□ -2.14
BRIP1-202ENST00000577598 LINC01556Q5JQF7 62 aa1.66□□□□□ -2.14
BRIP1-202ENST00000577598 CUBNO60494 3623 aa1.65□□□□□ -2.15
BRIP1-202ENST00000577598 A0A096LPF7 62 aa1.65□□□□□ -2.15
BRIP1-202ENST00000577598 NBPF19A0A087WUL8 3843 aa1.64□□□□□ -2.15
BRIP1-202ENST00000577598 ANK3Q12955 4377 aaKnown RBP1.64□□□□□ -2.15
BRIP1-202ENST00000577598 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
BRIP1-202ENST00000577598 DEFB1P60022 68 aa1.64□□□□□ -2.15
BRIP1-202ENST00000577598 ITPR2Q14571 2701 aa1.63□□□□□ -2.15
BRIP1-202ENST00000577598 DEFB136Q30KP8 78 aa1.63□□□□□ -2.15
BRIP1-202ENST00000577598 MXRA5Q9NR99 2828 aa1.62□□□□□ -2.15
BRIP1-202ENST00000577598 KRTAP9-6A8MVA2 160 aa1.61□□□□□ -2.15
BRIP1-202ENST00000577598 CSMD2Q7Z408 3487 aa1.61□□□□□ -2.15
BRIP1-202ENST00000577598 DNAH2Q9P225 4427 aa1.61□□□□□ -2.15
BRIP1-202ENST00000577598 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
BRIP1-202ENST00000577598 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.15
BRIP1-202ENST00000577598 DNAH9Q9NYC9 4486 aa1.59□□□□□ -2.15
BRIP1-202ENST00000577598 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.16
BRIP1-202ENST00000577598 MAP1AP78559 2803 aaPredicted RBP1.58□□□□□ -2.16
BRIP1-202ENST00000577598 TNXBP22105 4242 aa1.57□□□□□ -2.16
BRIP1-202ENST00000577598 DEFB4AO15263 64 aa1.57□□□□□ -2.16
BRIP1-202ENST00000577598 PKD1P98161 4303 aa1.56□□□□□ -2.16
BRIP1-202ENST00000577598 NIPBLQ6KC79 2804 aaeCLIP1.56□□□□□ -2.16
BRIP1-202ENST00000577598 VPS13BQ7Z7G8 4022 aa1.56□□□□□ -2.16
BRIP1-202ENST00000577598 FAT2Q9NYQ8 4349 aa1.55□□□□□ -2.16
BRIP1-202ENST00000577598 TNP1P09430 55 aa1.53□□□□□ -2.16
BRIP1-202ENST00000577598 M0QZ58 72 aa1.52□□□□□ -2.17
BRIP1-202ENST00000577598 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
BRIP1-202ENST00000577598 DNAH11Q96DT5 4516 aa1.52□□□□□ -2.17
BRIP1-202ENST00000577598 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
BRIP1-202ENST00000577598 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
BRIP1-202ENST00000577598 LYSTQ99698 3801 aa1.5□□□□□ -2.17
BRIP1-202ENST00000577598 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
BRIP1-202ENST00000577598 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
BRIP1-202ENST00000577598 RPS29P62273 56 aaKnown RBP1.49□□□□□ -2.17
BRIP1-202ENST00000577598 DNAH8Q96JB1 4490 aa1.48□□□□□ -2.17
BRIP1-202ENST00000577598 PRM1P04553 51 aa1.48□□□□□ -2.17
BRIP1-202ENST00000577598 HSPG2P98160 4391 aa1.47□□□□□ -2.17
BRIP1-202ENST00000577598 DNAH10Q8IVF4 4471 aa1.45□□□□□ -2.18
BRIP1-202ENST00000577598 SACSQ9NZJ4 4579 aa1.43□□□□□ -2.18
BRIP1-202ENST00000577598 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
BRIP1-202ENST00000577598 DNAH5Q8TE73 4624 aa1.4□□□□□ -2.19
BRIP1-202ENST00000577598 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
BRIP1-202ENST00000577598 KRTAP2-3P0C7H8 128 aa1.39□□□□□ -2.19
BRIP1-202ENST00000577598 KRTAP2-4Q9BYR9 128 aa1.39□□□□□ -2.19
BRIP1-202ENST00000577598 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
BRIP1-202ENST00000577598 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
BRIP1-202ENST00000577598 PLECQ15149 4684 aaKnown RBP1.38□□□□□ -2.19
BRIP1-202ENST00000577598 SMR3AQ99954 134 aa1.38□□□□□ -2.19
BRIP1-202ENST00000577598 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
BRIP1-202ENST00000577598 STARD9Q9P2P6 4700 aa1.35□□□□□ -2.19
BRIP1-202ENST00000577598 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
BRIP1-202ENST00000577598 FAT1Q14517 4588 aa1.35□□□□□ -2.19
BRIP1-202ENST00000577598 MUC17Q685J3 4493 aa1.34□□□□□ -2.2
BRIP1-202ENST00000577598 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
BRIP1-202ENST00000577598 LRP1BQ9NZR2 4599 aa1.33□□□□□ -2.2
BRIP1-202ENST00000577598 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
BRIP1-202ENST00000577598 DYNC1H1Q14204 4646 aaKnown RBP1.31□□□□□ -2.2
BRIP1-202ENST00000577598 SMR3BP02814 79 aaPredicted RBP1.3□□□□□ -2.2
BRIP1-202ENST00000577598 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.21
BRIP1-202ENST00000577598 HYDINQ4G0P3 5121 aa1.26□□□□□ -2.21
BRIP1-202ENST00000577598 MYCBP2O75592 4640 aa1.25□□□□□ -2.21
BRIP1-202ENST00000577598 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms