RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 MT1HL1P0DM35 61 aa10.18□□□□□ -0.78
KLHDC4-225ENST00000569487 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
KLHDC4-225ENST00000569487 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
KLHDC4-225ENST00000569487 A8MUU9 505 aa10.1□□□□□ -0.79
KLHDC4-225ENST00000569487 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
KLHDC4-225ENST00000569487 PCLOQ9Y6V0 5065 aa10.09□□□□□ -0.79
KLHDC4-225ENST00000569487 C9orf92A6NGG3 77 aa9.99□□□□□ -0.81
KLHDC4-225ENST00000569487 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
KLHDC4-225ENST00000569487 H0YAA0 97 aa9.94□□□□□ -0.82
KLHDC4-225ENST00000569487 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
KLHDC4-225ENST00000569487 A0A1B0GU33 70 aa9.87□□□□□ -0.83
KLHDC4-225ENST00000569487 J3QL48 77 aa9.87□□□□□ -0.83
KLHDC4-225ENST00000569487 HERC1Q15751 4861 aa9.87□□□□□ -0.83
KLHDC4-225ENST00000569487 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
KLHDC4-225ENST00000569487 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
KLHDC4-225ENST00000569487 LPAP08519 4548 aa9.86□□□□□ -0.83
KLHDC4-225ENST00000569487 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
KLHDC4-225ENST00000569487 LRP2P98164 4655 aa9.71□□□□□ -0.85
KLHDC4-225ENST00000569487 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
KLHDC4-225ENST00000569487 K7ERS5 55 aa9.62□□□□□ -0.87
KLHDC4-225ENST00000569487 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
KLHDC4-225ENST00000569487 XP32Q5T750 250 aa9.59□□□□□ -0.87
KLHDC4-225ENST00000569487 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
KLHDC4-225ENST00000569487 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
KLHDC4-225ENST00000569487 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
KLHDC4-225ENST00000569487 TPRXLQ17RH7 258 aa9.52□□□□□ -0.88
KLHDC4-225ENST00000569487 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
KLHDC4-225ENST00000569487 S4R3F8 94 aa9.44□□□□□ -0.9
KLHDC4-225ENST00000569487 ROMO1P60602 79 aa9.43□□□□□ -0.9
KLHDC4-225ENST00000569487 KRTAP13-4Q3LI77 160 aa9.42□□□□□ -0.9
KLHDC4-225ENST00000569487 MUC2Q02817 5179 aa9.34□□□□□ -0.91
KLHDC4-225ENST00000569487 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
KLHDC4-225ENST00000569487 A0A0D9SG42 100 aa9.31□□□□□ -0.92
KLHDC4-225ENST00000569487 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
KLHDC4-225ENST00000569487 P0C880 135 aa9.28□□□□□ -0.92
KLHDC4-225ENST00000569487 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
KLHDC4-225ENST00000569487 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
KLHDC4-225ENST00000569487 RNF213Q63HN8 5207 aa9.17□□□□□ -0.94
KLHDC4-225ENST00000569487 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
KLHDC4-225ENST00000569487 H3BS24 57 aa9.15□□□□□ -0.94
KLHDC4-225ENST00000569487 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
KLHDC4-225ENST00000569487 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
KLHDC4-225ENST00000569487 M0QZ58 72 aa9.06□□□□□ -0.96
KLHDC4-225ENST00000569487 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
KLHDC4-225ENST00000569487 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
KLHDC4-225ENST00000569487 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
KLHDC4-225ENST00000569487 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
KLHDC4-225ENST00000569487 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
KLHDC4-225ENST00000569487 LCE2CQ5TA81 110 aa8.79□□□□□ -1
KLHDC4-225ENST00000569487 FLGP20930 4061 aaPredicted RBP8.78□□□□□ -1
KLHDC4-225ENST00000569487 R4GN34 69 aa8.74□□□□□ -1.01
KLHDC4-225ENST00000569487 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
KLHDC4-225ENST00000569487 MT1HP80294 61 aa8.58□□□□□ -1.04
KLHDC4-225ENST00000569487 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
KLHDC4-225ENST00000569487 M0R2T5 61 aa8.44□□□□□ -1.06
KLHDC4-225ENST00000569487 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
KLHDC4-225ENST00000569487 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
KLHDC4-225ENST00000569487 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
KLHDC4-225ENST00000569487 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
KLHDC4-225ENST00000569487 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
KLHDC4-225ENST00000569487 MT2AP02795 61 aa8.21□□□□□ -1.1
KLHDC4-225ENST00000569487 MT1FP04733 61 aa8.2□□□□□ -1.1
KLHDC4-225ENST00000569487 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
KLHDC4-225ENST00000569487 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
KLHDC4-225ENST00000569487 TNP1P09430 55 aa8.06□□□□□ -1.12
KLHDC4-225ENST00000569487 LUZP6Q538Z0 58 aa8□□□□□ -1.13
KLHDC4-225ENST00000569487 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
KLHDC4-225ENST00000569487 KRTAP9-3Q9BYQ3 159 aa7.95□□□□□ -1.14
KLHDC4-225ENST00000569487 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
KLHDC4-225ENST00000569487 SPRR5A0A1B0GTR4 108 aa7.84□□□□□ -1.15
KLHDC4-225ENST00000569487 LCE2BO14633 110 aa7.82□□□□□ -1.16
KLHDC4-225ENST00000569487 USH2AO75445 5202 aa7.81□□□□□ -1.16
KLHDC4-225ENST00000569487 MT1BP07438 61 aa7.71□□□□□ -1.18
KLHDC4-225ENST00000569487 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
KLHDC4-225ENST00000569487 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
KLHDC4-225ENST00000569487 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
KLHDC4-225ENST00000569487 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
KLHDC4-225ENST00000569487 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
KLHDC4-225ENST00000569487 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
KLHDC4-225ENST00000569487 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
KLHDC4-225ENST00000569487 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
KLHDC4-225ENST00000569487 MT1XP80297 61 aa7.42□□□□□ -1.22
KLHDC4-225ENST00000569487 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
KLHDC4-225ENST00000569487 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
KLHDC4-225ENST00000569487 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
KLHDC4-225ENST00000569487 KRTAP19-6Q3LI70 58 aa7.23□□□□□ -1.25
KLHDC4-225ENST00000569487 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
KLHDC4-225ENST00000569487 KMT2DO14686 5537 aa7.19□□□□□ -1.26
KLHDC4-225ENST00000569487 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
KLHDC4-225ENST00000569487 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
KLHDC4-225ENST00000569487 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
KLHDC4-225ENST00000569487 INE1O15225 51 aa7.01□□□□□ -1.29
KLHDC4-225ENST00000569487 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
KLHDC4-225ENST00000569487 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
KLHDC4-225ENST00000569487 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
KLHDC4-225ENST00000569487 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
KLHDC4-225ENST00000569487 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
KLHDC4-225ENST00000569487 LCE3CQ5T5A8 94 aa6.83□□□□□ -1.32
KLHDC4-225ENST00000569487 SYNE2Q8WXH0 6885 aaKnown RBP6.8□□□□□ -1.32
KLHDC4-225ENST00000569487 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms