RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
COMMD4-222ENST00000568034 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
COMMD4-222ENST00000568034 S4R3F8 94 aa8.61□□□□□ -1.03
COMMD4-222ENST00000568034 H7BZZ5 65 aa8.6□□□□□ -1.03
COMMD4-222ENST00000568034 MT2AP02795 61 aa8.6□□□□□ -1.03
COMMD4-222ENST00000568034 ATP5EP56381 51 aaPredicted RBP8.6□□□□□ -1.03
COMMD4-222ENST00000568034 LCA10Q71F78 164 aa8.59□□□□□ -1.03
COMMD4-222ENST00000568034 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.04
COMMD4-222ENST00000568034 A8MUN3 132 aa8.57□□□□□ -1.04
COMMD4-222ENST00000568034 MT1FP04733 61 aa8.55□□□□□ -1.04
COMMD4-222ENST00000568034 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
COMMD4-222ENST00000568034 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
COMMD4-222ENST00000568034 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
COMMD4-222ENST00000568034 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
COMMD4-222ENST00000568034 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
COMMD4-222ENST00000568034 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
COMMD4-222ENST00000568034 SERP1Q9Y6X1 66 aa8.43□□□□□ -1.06
COMMD4-222ENST00000568034 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
COMMD4-222ENST00000568034 KRTAP9-3Q9BYQ3 159 aa8.4□□□□□ -1.06
COMMD4-222ENST00000568034 ACYP2P14621 99 aa8.33□□□□□ -1.08
COMMD4-222ENST00000568034 USH2AO75445 5202 aa8.31□□□□□ -1.08
COMMD4-222ENST00000568034 LCE2BO14633 110 aa8.27□□□□□ -1.09
COMMD4-222ENST00000568034 H0YAA0 97 aa8.25□□□□□ -1.09
COMMD4-222ENST00000568034 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
COMMD4-222ENST00000568034 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
COMMD4-222ENST00000568034 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
COMMD4-222ENST00000568034 CHKB-CPT1BH3BT56 60 aa8.16□□□□□ -1.1
COMMD4-222ENST00000568034 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
COMMD4-222ENST00000568034 COA5Q86WW8 74 aa8.14□□□□□ -1.11
COMMD4-222ENST00000568034 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
COMMD4-222ENST00000568034 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
COMMD4-222ENST00000568034 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
COMMD4-222ENST00000568034 P0C880 135 aa8.07□□□□□ -1.12
COMMD4-222ENST00000568034 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
COMMD4-222ENST00000568034 V9GYY9 64 aa8.07□□□□□ -1.12
COMMD4-222ENST00000568034 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
COMMD4-222ENST00000568034 Q1T7F1 81 aa8□□□□□ -1.13
COMMD4-222ENST00000568034 MT1BP07438 61 aa7.97□□□□□ -1.13
COMMD4-222ENST00000568034 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
COMMD4-222ENST00000568034 Q5VV11 94 aa7.9□□□□□ -1.14
COMMD4-222ENST00000568034 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
COMMD4-222ENST00000568034 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
COMMD4-222ENST00000568034 R4GN34 69 aa7.88□□□□□ -1.15
COMMD4-222ENST00000568034 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
COMMD4-222ENST00000568034 M0QZ58 72 aa7.86□□□□□ -1.15
COMMD4-222ENST00000568034 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
COMMD4-222ENST00000568034 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
COMMD4-222ENST00000568034 PSPHP1O15172 72 aa7.83□□□□□ -1.16
COMMD4-222ENST00000568034 A0A1B0GU69 56 aa7.75□□□□□ -1.17
COMMD4-222ENST00000568034 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
COMMD4-222ENST00000568034 SEC61GP60059 68 aa7.74□□□□□ -1.17
COMMD4-222ENST00000568034 MACF1Q9UPN3 7388 aaKnown RBP7.73□□□□□ -1.17
COMMD4-222ENST00000568034 LINC01554Q52M75 96 aa7.71□□□□□ -1.18
COMMD4-222ENST00000568034 BRK1Q8WUW1 75 aa7.68□□□□□ -1.18
COMMD4-222ENST00000568034 A6NED7 52 aa7.67□□□□□ -1.18
COMMD4-222ENST00000568034 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
COMMD4-222ENST00000568034 A6NN06 94 aa7.64□□□□□ -1.19
COMMD4-222ENST00000568034 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
COMMD4-222ENST00000568034 A0A1B0GU33 70 aa7.62□□□□□ -1.19
COMMD4-222ENST00000568034 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
COMMD4-222ENST00000568034 PRO0628Q9UI54 55 aa7.58□□□□□ -1.2
COMMD4-222ENST00000568034 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
COMMD4-222ENST00000568034 MT1XP80297 61 aa7.56□□□□□ -1.2
COMMD4-222ENST00000568034 UQCR11O14957 56 aa7.54□□□□□ -1.2
COMMD4-222ENST00000568034 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
COMMD4-222ENST00000568034 A0A0D9SG42 100 aa7.47□□□□□ -1.21
COMMD4-222ENST00000568034 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
COMMD4-222ENST00000568034 MIR22HGQ0VDD5 57 aa7.45□□□□□ -1.22
COMMD4-222ENST00000568034 A8MU10 97 aa7.39□□□□□ -1.23
COMMD4-222ENST00000568034 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
COMMD4-222ENST00000568034 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
COMMD4-222ENST00000568034 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
COMMD4-222ENST00000568034 SPINT4Q6UDR6 99 aa7.32□□□□□ -1.24
COMMD4-222ENST00000568034 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
COMMD4-222ENST00000568034 KMT2DO14686 5537 aa7.27□□□□□ -1.25
COMMD4-222ENST00000568034 PMAIP1Q13794 54 aa7.26□□□□□ -1.25
COMMD4-222ENST00000568034 SVIPQ8NHG7 77 aa7.24□□□□□ -1.25
COMMD4-222ENST00000568034 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
COMMD4-222ENST00000568034 K7ERS5 55 aa7.22□□□□□ -1.25
COMMD4-222ENST00000568034 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
COMMD4-222ENST00000568034 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
COMMD4-222ENST00000568034 NEBP20929 6669 aa7.14□□□□□ -1.27
COMMD4-222ENST00000568034 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
COMMD4-222ENST00000568034 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
COMMD4-222ENST00000568034 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
COMMD4-222ENST00000568034 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
COMMD4-222ENST00000568034 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
COMMD4-222ENST00000568034 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
COMMD4-222ENST00000568034 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
COMMD4-222ENST00000568034 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
COMMD4-222ENST00000568034 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
COMMD4-222ENST00000568034 TNP1P09430 55 aa6.85□□□□□ -1.31
COMMD4-222ENST00000568034 ROMO1P60602 79 aa6.82□□□□□ -1.32
COMMD4-222ENST00000568034 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
COMMD4-222ENST00000568034 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
COMMD4-222ENST00000568034 SPRR2EP22531 72 aa6.73□□□□□ -1.33
COMMD4-222ENST00000568034 SPRR2BP35325 72 aa6.73□□□□□ -1.33
COMMD4-222ENST00000568034 SPRR2AP35326 72 aa6.73□□□□□ -1.33
COMMD4-222ENST00000568034 LCE1AQ5T7P2 110 aa6.72□□□□□ -1.33
COMMD4-222ENST00000568034 PRAC1Q96KF2 57 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms