RNA–Protein interactions for RNA: ENST00000567560.5

MYO9A-216, Transcript of myosin IXA, humanhuman

TSL 1 (best)

Gene MYO9A, Length 4,056 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO9A-216ENST00000567560 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
MYO9A-216ENST00000567560 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
MYO9A-216ENST00000567560 FRAS1Q86XX4 4008 aa7.32□□□□□ -1.24
MYO9A-216ENST00000567560 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
MYO9A-216ENST00000567560 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
MYO9A-216ENST00000567560 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
MYO9A-216ENST00000567560 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
MYO9A-216ENST00000567560 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
MYO9A-216ENST00000567560 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
MYO9A-216ENST00000567560 A0A1B0GVY2 172 aa7.21□□□□□ -1.25
MYO9A-216ENST00000567560 FAT1Q14517 4588 aa7.2□□□□□ -1.26
MYO9A-216ENST00000567560 DNAH5Q8TE73 4624 aa7.18□□□□□ -1.26
MYO9A-216ENST00000567560 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
MYO9A-216ENST00000567560 PKHD1P08F94 4074 aa7.17□□□□□ -1.26
MYO9A-216ENST00000567560 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
MYO9A-216ENST00000567560 SACSQ9NZJ4 4579 aa7.11□□□□□ -1.27
MYO9A-216ENST00000567560 KMT2CQ8NEZ4 4911 aaKnown RBP7.1□□□□□ -1.27
MYO9A-216ENST00000567560 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.28
MYO9A-216ENST00000567560 VPS13BQ7Z7G8 4022 aa7.08□□□□□ -1.28
MYO9A-216ENST00000567560 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
MYO9A-216ENST00000567560 TNP1P09430 55 aa7.07□□□□□ -1.28
MYO9A-216ENST00000567560 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
MYO9A-216ENST00000567560 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
MYO9A-216ENST00000567560 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
MYO9A-216ENST00000567560 PKD1P98161 4303 aa6.99□□□□□ -1.29
MYO9A-216ENST00000567560 RYR2Q92736 4967 aa6.91□□□□□ -1.3
MYO9A-216ENST00000567560 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
MYO9A-216ENST00000567560 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
MYO9A-216ENST00000567560 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
MYO9A-216ENST00000567560 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
MYO9A-216ENST00000567560 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
MYO9A-216ENST00000567560 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
MYO9A-216ENST00000567560 LRP1Q07954 4544 aaKnown RBP6.87□□□□□ -1.31
MYO9A-216ENST00000567560 RYR3Q15413 4870 aa6.82□□□□□ -1.32
MYO9A-216ENST00000567560 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
MYO9A-216ENST00000567560 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
MYO9A-216ENST00000567560 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
MYO9A-216ENST00000567560 RYR1P21817 5038 aa6.73□□□□□ -1.33
MYO9A-216ENST00000567560 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
MYO9A-216ENST00000567560 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
MYO9A-216ENST00000567560 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
MYO9A-216ENST00000567560 HSPG2P98160 4391 aa6.65□□□□□ -1.34
MYO9A-216ENST00000567560 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
MYO9A-216ENST00000567560 LRP2P98164 4655 aa6.51□□□□□ -1.37
MYO9A-216ENST00000567560 TNXBP22105 4242 aa6.39□□□□□ -1.39
MYO9A-216ENST00000567560 LPAP08519 4548 aa6.39□□□□□ -1.39
MYO9A-216ENST00000567560 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
MYO9A-216ENST00000567560 HERC2O95714 4834 aa6.37□□□□□ -1.39
MYO9A-216ENST00000567560 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
MYO9A-216ENST00000567560 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
MYO9A-216ENST00000567560 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
MYO9A-216ENST00000567560 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
MYO9A-216ENST00000567560 MUC2Q02817 5179 aa6.13□□□□□ -1.43
MYO9A-216ENST00000567560 HERC1Q15751 4861 aa6.13□□□□□ -1.43
MYO9A-216ENST00000567560 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
MYO9A-216ENST00000567560 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
MYO9A-216ENST00000567560 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
MYO9A-216ENST00000567560 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
MYO9A-216ENST00000567560 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
MYO9A-216ENST00000567560 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
MYO9A-216ENST00000567560 INE1O15225 51 aa5.85□□□□□ -1.47
MYO9A-216ENST00000567560 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
MYO9A-216ENST00000567560 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
MYO9A-216ENST00000567560 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
MYO9A-216ENST00000567560 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
MYO9A-216ENST00000567560 MT1FP04733 61 aa5.75□□□□□ -1.49
MYO9A-216ENST00000567560 MT2AP02795 61 aa5.74□□□□□ -1.49
MYO9A-216ENST00000567560 MT1HP80294 61 aa5.74□□□□□ -1.49
MYO9A-216ENST00000567560 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
MYO9A-216ENST00000567560 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
MYO9A-216ENST00000567560 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
MYO9A-216ENST00000567560 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
MYO9A-216ENST00000567560 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
MYO9A-216ENST00000567560 FLGP20930 4061 aaPredicted RBP5.57□□□□□ -1.52
MYO9A-216ENST00000567560 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
MYO9A-216ENST00000567560 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
MYO9A-216ENST00000567560 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
MYO9A-216ENST00000567560 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
MYO9A-216ENST00000567560 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
MYO9A-216ENST00000567560 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
MYO9A-216ENST00000567560 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
MYO9A-216ENST00000567560 MT1XP80297 61 aa5.4□□□□□ -1.54
MYO9A-216ENST00000567560 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
MYO9A-216ENST00000567560 MT1BP07438 61 aa5.37□□□□□ -1.55
MYO9A-216ENST00000567560 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
MYO9A-216ENST00000567560 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
MYO9A-216ENST00000567560 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
MYO9A-216ENST00000567560 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
MYO9A-216ENST00000567560 USH2AO75445 5202 aa5.25□□□□□ -1.57
MYO9A-216ENST00000567560 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
MYO9A-216ENST00000567560 KMT2DO14686 5537 aa5.18□□□□□ -1.58
MYO9A-216ENST00000567560 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
MYO9A-216ENST00000567560 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
MYO9A-216ENST00000567560 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
MYO9A-216ENST00000567560 LCE2BO14633 110 aa5.07□□□□□ -1.6
MYO9A-216ENST00000567560 MT1GP13640 62 aa5.01□□□□□ -1.61
MYO9A-216ENST00000567560 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
MYO9A-216ENST00000567560 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
MYO9A-216ENST00000567560 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
MYO9A-216ENST00000567560 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms