RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 S4R3F8 94 aa12.8□□□□□ -0.36
FANCA-221ENST00000566889 PKHD1L1Q86WI1 4243 aa12.78□□□□□ -0.36
FANCA-221ENST00000566889 KRTAP12-2P59991 146 aa12.66□□□□□ -0.38
FANCA-221ENST00000566889 KRTAP21-3Q3LHN1 58 aa12.66□□□□□ -0.38
FANCA-221ENST00000566889 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
FANCA-221ENST00000566889 PKHD1P08F94 4074 aa12.59□□□□□ -0.39
FANCA-221ENST00000566889 KRTAP12-1P59990 96 aa12.57□□□□□ -0.4
FANCA-221ENST00000566889 XP32Q5T750 250 aa12.57□□□□□ -0.4
FANCA-221ENST00000566889 KRTAP10-4P60372 401 aaPredicted RBP12.56□□□□□ -0.4
FANCA-221ENST00000566889 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
FANCA-221ENST00000566889 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
FANCA-221ENST00000566889 DMBT1Q9UGM3 2413 aaPredicted RBP12.49□□□□□ -0.41
FANCA-221ENST00000566889 KRTAP10-8P60410 259 aa12.47□□□□□ -0.41
FANCA-221ENST00000566889 M0QZ58 72 aa12.39□□□□□ -0.43
FANCA-221ENST00000566889 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
FANCA-221ENST00000566889 LRP1Q07954 4544 aaKnown RBP12.26□□□□□ -0.45
FANCA-221ENST00000566889 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
FANCA-221ENST00000566889 FAT1Q14517 4588 aa12.25□□□□□ -0.45
FANCA-221ENST00000566889 A0A1B0GVY2 172 aa12.18□□□□□ -0.46
FANCA-221ENST00000566889 TNXBP22105 4242 aa12.16□□□□□ -0.46
FANCA-221ENST00000566889 HSPG2P98160 4391 aa12.12□□□□□ -0.47
FANCA-221ENST00000566889 PLAC4Q8WY50 150 aa12.04□□□□□ -0.48
FANCA-221ENST00000566889 A0A0A0MQY5 61 aa11.94□□□□□ -0.5
FANCA-221ENST00000566889 LUZP6Q538Z0 58 aa11.9□□□□□ -0.5
FANCA-221ENST00000566889 R4GN34 69 aa11.86□□□□□ -0.51
FANCA-221ENST00000566889 PP632Q6XCG6 107 aa11.72□□□□□ -0.53
FANCA-221ENST00000566889 MYCBP2O75592 4640 aa11.71□□□□□ -0.54
FANCA-221ENST00000566889 Q5VSD8 79 aa11.7□□□□□ -0.54
FANCA-221ENST00000566889 KMT2CQ8NEZ4 4911 aaKnown RBP11.57□□□□□ -0.56
FANCA-221ENST00000566889 RYR2Q92736 4967 aa11.54□□□□□ -0.56
FANCA-221ENST00000566889 LPAP08519 4548 aa11.51□□□□□ -0.57
FANCA-221ENST00000566889 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
FANCA-221ENST00000566889 LORP23490 312 aaPredicted RBP11.45□□□□□ -0.58
FANCA-221ENST00000566889 CAMK2N1Q7Z7J9 78 aa11.34□□□□□ -0.59
FANCA-221ENST00000566889 LRP2P98164 4655 aa11.34□□□□□ -0.59
FANCA-221ENST00000566889 RYR3Q15413 4870 aa11.27□□□□□ -0.6
FANCA-221ENST00000566889 KRTAP23-1A1A580 65 aa11.19□□□□□ -0.62
FANCA-221ENST00000566889 KRTAP17-1Q9BYP8 105 aa11.18□□□□□ -0.62
FANCA-221ENST00000566889 SPRR5A0A1B0GTR4 108 aa11.15□□□□□ -0.62
FANCA-221ENST00000566889 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.63
FANCA-221ENST00000566889 RYR1P21817 5038 aa11.09□□□□□ -0.63
FANCA-221ENST00000566889 TNP1P09430 55 aa11.06□□□□□ -0.64
FANCA-221ENST00000566889 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
FANCA-221ENST00000566889 KRTAP4-1Q9BYQ7 146 aa10.88□□□□□ -0.67
FANCA-221ENST00000566889 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
FANCA-221ENST00000566889 KRTAP19-2Q3LHN2 52 aa10.86□□□□□ -0.67
FANCA-221ENST00000566889 KIAA1109Q2LD37 5005 aa10.84□□□□□ -0.67
FANCA-221ENST00000566889 PRO2289Q9P1D8 64 aa10.65□□□□□ -0.71
FANCA-221ENST00000566889 ABCA13Q86UQ4 5058 aa10.61□□□□□ -0.71
FANCA-221ENST00000566889 KRTAP4-5Q9BYR2 181 aa10.48□□□□□ -0.73
FANCA-221ENST00000566889 INE1O15225 51 aa10.47□□□□□ -0.73
FANCA-221ENST00000566889 FLGP20930 4061 aaPredicted RBP10.42□□□□□ -0.74
FANCA-221ENST00000566889 HERC1Q15751 4861 aa10.41□□□□□ -0.74
FANCA-221ENST00000566889 BIRC6Q9NR09 4857 aa10.32□□□□□ -0.76
FANCA-221ENST00000566889 LCE3AQ5TA76 89 aa10.3□□□□□ -0.76
FANCA-221ENST00000566889 SPRR2GQ9BYE4 73 aa10.29□□□□□ -0.76
FANCA-221ENST00000566889 HERC2O95714 4834 aa10.25□□□□□ -0.77
FANCA-221ENST00000566889 J3QL48 77 aa10.25□□□□□ -0.77
FANCA-221ENST00000566889 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
FANCA-221ENST00000566889 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
FANCA-221ENST00000566889 MUC2Q02817 5179 aa9.92□□□□□ -0.82
FANCA-221ENST00000566889 PCLOQ9Y6V0 5065 aa9.9□□□□□ -0.82
FANCA-221ENST00000566889 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
FANCA-221ENST00000566889 KRTAP12-3P60328 96 aa9.81□□□□□ -0.84
FANCA-221ENST00000566889 KRTAP10-12P60413 245 aa9.74□□□□□ -0.85
FANCA-221ENST00000566889 KRTAP19-8Q3LI54 63 aa9.71□□□□□ -0.85
FANCA-221ENST00000566889 M0R2T5 61 aa9.69□□□□□ -0.86
FANCA-221ENST00000566889 KRTAP10-5P60370 271 aa9.65□□□□□ -0.86
FANCA-221ENST00000566889 KRTAP10-10P60014 251 aa9.64□□□□□ -0.87
FANCA-221ENST00000566889 MT1FP04733 61 aa9.62□□□□□ -0.87
FANCA-221ENST00000566889 MT2AP02795 61 aa9.61□□□□□ -0.87
FANCA-221ENST00000566889 MT1XP80297 61 aa9.6□□□□□ -0.87
FANCA-221ENST00000566889 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
FANCA-221ENST00000566889 MT1HP80294 61 aa9.55□□□□□ -0.88
FANCA-221ENST00000566889 MT1BP07438 61 aa9.5□□□□□ -0.89
FANCA-221ENST00000566889 KRTAP9-8Q9BYQ0 159 aa9.46□□□□□ -0.89
FANCA-221ENST00000566889 FAT4Q6V0I7 4981 aa9.42□□□□□ -0.9
FANCA-221ENST00000566889 KRTAP10-7P60409 375 aaPredicted RBP9.37□□□□□ -0.91
FANCA-221ENST00000566889 LCE3CQ5T5A8 94 aa9.29□□□□□ -0.92
FANCA-221ENST00000566889 UBR4Q5T4S7 5183 aa9.27□□□□□ -0.93
FANCA-221ENST00000566889 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
FANCA-221ENST00000566889 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
FANCA-221ENST00000566889 KRTAP9-3Q9BYQ3 159 aa9.03□□□□□ -0.96
FANCA-221ENST00000566889 KRTAP2-3P0C7H8 128 aa9□□□□□ -0.97
FANCA-221ENST00000566889 KRTAP2-4Q9BYR9 128 aa9□□□□□ -0.97
FANCA-221ENST00000566889 KRTAP2-1Q9BYU5 128 aa9□□□□□ -0.97
FANCA-221ENST00000566889 KRTAP9-6A8MVA2 160 aa8.93□□□□□ -0.98
FANCA-221ENST00000566889 KRTAP19-4Q3LI73 84 aa8.76□□□□□ -1.01
FANCA-221ENST00000566889 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
FANCA-221ENST00000566889 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
FANCA-221ENST00000566889 KRTAP19-7Q3SYF9 63 aa8.55□□□□□ -1.04
FANCA-221ENST00000566889 LCE2BO14633 110 aa8.52□□□□□ -1.05
FANCA-221ENST00000566889 KRTAP4-7Q9BYR0 210 aa8.5□□□□□ -1.05
FANCA-221ENST00000566889 MT1LQ93083 61 aa8.38□□□□□ -1.07
FANCA-221ENST00000566889 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
FANCA-221ENST00000566889 KMT2DO14686 5537 aa8.34□□□□□ -1.07
FANCA-221ENST00000566889 MT1EP04732 61 aa8.26□□□□□ -1.09
FANCA-221ENST00000566889 KRTAP12-4P60329 112 aa8.06□□□□□ -1.12
FANCA-221ENST00000566889 USH2AO75445 5202 aa8.03□□□□□ -1.12
FANCA-221ENST00000566889 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms