RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 NISCHQ9Y2I1 1504 aa47.92■■■■■ 5.26
FANCA-221ENST00000566889 HRCP23327 699 aa42.27■■■■■ 4.36
FANCA-221ENST00000566889 SHROOM4Q9ULL8 1493 aa41.68■■■■■ 4.26
FANCA-221ENST00000566889 SUPT5HO00267 1087 aaKnown RBP41.54■■■■■ 4.24
FANCA-221ENST00000566889 MYO15BQ96JP2 1530 aa41.28■■■■■ 4.2
FANCA-221ENST00000566889 PCGF6Q9BYE7 350 aa41.19■■■■■ 4.18
FANCA-221ENST00000566889 CHIC1Q5VXU3 224 aa41.13■■■■■ 4.18
FANCA-221ENST00000566889 PPARGC1BQ86YN6 1023 aaKnown RBP40.95■■■■■ 4.15
FANCA-221ENST00000566889 PELP1Q8IZL8 1130 aaKnown RBP40.93■■■■■ 4.14
FANCA-221ENST00000566889 DCAF1Q9Y4B6 1507 aa40.82■■■■■ 4.13
FANCA-221ENST00000566889 ZCCHC6Q5VYS8 1495 aaKnown RBP40.82■■■■■ 4.13
FANCA-221ENST00000566889 CCDC180Q9P1Z9 1646 aa40.31■■■■■ 4.04
FANCA-221ENST00000566889 TRIM26Q12899 539 aaPredicted RBP40.23■■■■■ 4.03
FANCA-221ENST00000566889 ZEB1P37275 1124 aaPredicted RBP40.08■■■■■ 4.01
FANCA-221ENST00000566889 LOC105371045A0A1W2PR82 267 aa39.88■■■■□ 3.97
FANCA-221ENST00000566889 SCAF1Q9H7N4 1312 aaKnown RBP39.72■■■■□ 3.95
FANCA-221ENST00000566889 MYT1Q01538 1121 aa39.44■■■■□ 3.9
FANCA-221ENST00000566889 DCAF8L2P0C7V8 631 aa39.19■■■■□ 3.86
FANCA-221ENST00000566889 ACIN1Q9UKV3 1341 aaKnown RBP38.97■■■■□ 3.83
FANCA-221ENST00000566889 ABCC9O60706 1549 aa38.8■■■■□ 3.8
FANCA-221ENST00000566889 NEUROD1Q13562 356 aa38.68■■■■□ 3.78
FANCA-221ENST00000566889 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
FANCA-221ENST00000566889 CENPBP07199 599 aaPredicted RBP38.61■■■■□ 3.77
FANCA-221ENST00000566889 GTF3C3Q9Y5Q9 886 aa38.48■■■■□ 3.75
FANCA-221ENST00000566889 RSF1Q96T23 1441 aaPredicted RBP38.42■■■■□ 3.74
FANCA-221ENST00000566889 DIEXFQ68CQ4 756 aaKnown RBP38.31■■■■□ 3.72
FANCA-221ENST00000566889 RB1CC1Q8TDY2 1594 aa38.3■■■■□ 3.72
FANCA-221ENST00000566889 FAM9AQ8IZU1 332 aaPredicted RBP38.3■■■■□ 3.72
FANCA-221ENST00000566889 CCER1Q8TC90 406 aaPredicted RBP38.27■■■■□ 3.72
FANCA-221ENST00000566889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.19■■■■□ 3.7
FANCA-221ENST00000566889 EHMT2Q96KQ7 1210 aa37.84■■■■□ 3.65
FANCA-221ENST00000566889 SCRIBQ14160 1630 aa37.76■■■■□ 3.64
FANCA-221ENST00000566889 ZNF316A6NFI3 1004 aaPredicted RBP37.71■■■■□ 3.63
FANCA-221ENST00000566889 WRNQ14191 1432 aaPredicted RBP eCLIP37.69■■■■□ 3.62
FANCA-221ENST00000566889 YTHDC1Q96MU7 727 aaKnown RBP37.36■■■■□ 3.57
FANCA-221ENST00000566889 EIF4G1Q04637 1599 aaKnown RBP37.31■■■■□ 3.56
FANCA-221ENST00000566889 MROH2BQ7Z745 1585 aa37.28■■■■□ 3.56
FANCA-221ENST00000566889 CEP162Q5TB80 1403 aa37.25■■■■□ 3.55
FANCA-221ENST00000566889 MIER1Q8N108 512 aa37.25■■■■□ 3.55
FANCA-221ENST00000566889 CLSPNQ9HAW4 1339 aa37.22■■■■□ 3.55
FANCA-221ENST00000566889 CECR2Q9BXF3 1484 aa37.21■■■■□ 3.55
FANCA-221ENST00000566889 TNIKQ9UKE5 1360 aa37.16■■■■□ 3.54
FANCA-221ENST00000566889 WIZO95785 1651 aa37.15■■■■□ 3.54
FANCA-221ENST00000566889 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
FANCA-221ENST00000566889 TTBK1Q5TCY1 1321 aaPredicted RBP37.02■■■■□ 3.52
FANCA-221ENST00000566889 EEA1Q15075 1411 aa36.95■■■■□ 3.51
FANCA-221ENST00000566889 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
FANCA-221ENST00000566889 NACADO15069 1562 aa36.82■■■■□ 3.48
FANCA-221ENST00000566889 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
FANCA-221ENST00000566889 SUPT16HQ9Y5B9 1047 aaKnown RBP36.76■■■■□ 3.48
FANCA-221ENST00000566889 SOGA1O94964 1423 aa36.72■■■■□ 3.47
FANCA-221ENST00000566889 CSRNP3Q8WYN3 585 aa36.7■■■■□ 3.47
FANCA-221ENST00000566889 GOLGA3Q08378 1498 aa36.69■■■■□ 3.46
FANCA-221ENST00000566889 ANP32EQ9BTT0 268 aa36.69■■■■□ 3.46
FANCA-221ENST00000566889 TOP2AP11388 1531 aaKnown RBP36.65■■■■□ 3.46
FANCA-221ENST00000566889 UBTFP17480 764 aaKnown RBP36.63■■■■□ 3.45
FANCA-221ENST00000566889 HNRNPUL2Q1KMD3 747 aaKnown RBP36.58■■■■□ 3.45
FANCA-221ENST00000566889 TSHZ2Q9NRE2 1034 aa36.55■■■■□ 3.44
FANCA-221ENST00000566889 SMARCA2P51531 1590 aa36.47■■■■□ 3.43
FANCA-221ENST00000566889 RUSC2Q8N2Y8 1516 aa36.43■■■■□ 3.42
FANCA-221ENST00000566889 BCL11AQ9H165 835 aa36.37■■■■□ 3.41
FANCA-221ENST00000566889 CEP164Q9UPV0 1460 aa36.35■■■■□ 3.41
FANCA-221ENST00000566889 VPS8Q8N3P4 1428 aa36.34■■■■□ 3.41
FANCA-221ENST00000566889 KIF21BO75037 1637 aa36.33■■■■□ 3.41
FANCA-221ENST00000566889 CLIP1P30622 1438 aa36.28■■■■□ 3.4
FANCA-221ENST00000566889 SMARCA4P51532 1647 aa36.22■■■■□ 3.39
FANCA-221ENST00000566889 APLP2Q06481 763 aa36.21■■■■□ 3.39
FANCA-221ENST00000566889 DHX57Q6P158 1386 aaKnown RBP36.19■■■■□ 3.38
FANCA-221ENST00000566889 BAZ1BQ9UIG0 1483 aaKnown RBP36.16■■■■□ 3.38
FANCA-221ENST00000566889 CUX2O14529 1486 aa35.81■■■■□ 3.32
FANCA-221ENST00000566889 SYNJ1O43426 1573 aa35.81■■■■□ 3.32
FANCA-221ENST00000566889 RAPGEF2Q9Y4G8 1499 aa35.78■■■■□ 3.32
FANCA-221ENST00000566889 FKBP8Q14318 412 aa35.74■■■■□ 3.31
FANCA-221ENST00000566889 RRBP1Q9P2E9 1410 aaKnown RBP35.72■■■■□ 3.31
FANCA-221ENST00000566889 RBM19Q9Y4C8 960 aaKnown RBP35.72■■■■□ 3.31
FANCA-221ENST00000566889 BCANQ96GW7 911 aa35.68■■■■□ 3.3
FANCA-221ENST00000566889 NEFLP07196 543 aa35.64■■■■□ 3.3
FANCA-221ENST00000566889 KCNH8Q96L42 1107 aa35.63■■■■□ 3.29
FANCA-221ENST00000566889 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
FANCA-221ENST00000566889 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
FANCA-221ENST00000566889 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.27
FANCA-221ENST00000566889 KANK4Q5T7N3 995 aaPredicted RBP35.45■■■■□ 3.27
FANCA-221ENST00000566889 CCNB3Q8WWL7 1395 aa35.45■■■■□ 3.27
FANCA-221ENST00000566889 CCER2I3L3R5 266 aa35.4■■■■□ 3.26
FANCA-221ENST00000566889 MAPKBP1O60336 1514 aa35.39■■■■□ 3.26
FANCA-221ENST00000566889 RANGAP1P46060 587 aaPredicted RBP35.39■■■■□ 3.26
FANCA-221ENST00000566889 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
FANCA-221ENST00000566889 FANCIQ9NVI1 1328 aa35.35■■■■□ 3.25
FANCA-221ENST00000566889 PRXQ9BXM0 1461 aa35.34■■■■□ 3.25
FANCA-221ENST00000566889 TOP2BQ02880 1626 aa35.32■■■■□ 3.24
FANCA-221ENST00000566889 DDX10Q13206 875 aaKnown RBP35.31■■■■□ 3.24
FANCA-221ENST00000566889 PPP1R15AO75807 674 aaPredicted RBP35.3■■■■□ 3.24
FANCA-221ENST00000566889 MSH5O43196 834 aa35.29■■■■□ 3.24
FANCA-221ENST00000566889 RAB3GAP2Q9H2M9 1393 aa35.28■■■■□ 3.24
FANCA-221ENST00000566889 MYT1LQ9UL68 1186 aa35.24■■■■□ 3.23
FANCA-221ENST00000566889 TIMELESSQ9UNS1 1208 aa35.24■■■■□ 3.23
FANCA-221ENST00000566889 WDR97A6NE52 1622 aa35.22■■■■□ 3.23
FANCA-221ENST00000566889 ITGAEP38570 1179 aa35.18■■■■□ 3.22
FANCA-221ENST00000566889 BIVM-ERCC5R4GMW8 1640 aa35.18■■■■□ 3.22
FANCA-221ENST00000566889 ANP32CO43423 234 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms