RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
AC138869.3-201ENST00000563960 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
AC138869.3-201ENST00000563960 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
AC138869.3-201ENST00000563960 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
AC138869.3-201ENST00000563960 TYMSOSQ8TAI1 123 aa5.09□□□□□ -1.59
AC138869.3-201ENST00000563960 RYR1P21817 5038 aa5.09□□□□□ -1.59
AC138869.3-201ENST00000563960 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
AC138869.3-201ENST00000563960 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
AC138869.3-201ENST00000563960 A0A1B0GU33 70 aa5.08□□□□□ -1.6
AC138869.3-201ENST00000563960 HSPG2P98160 4391 aa5.08□□□□□ -1.6
AC138869.3-201ENST00000563960 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
AC138869.3-201ENST00000563960 Q8N1X5 172 aa5.06□□□□□ -1.6
AC138869.3-201ENST00000563960 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
AC138869.3-201ENST00000563960 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
AC138869.3-201ENST00000563960 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
AC138869.3-201ENST00000563960 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
AC138869.3-201ENST00000563960 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
AC138869.3-201ENST00000563960 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
AC138869.3-201ENST00000563960 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
AC138869.3-201ENST00000563960 Q5VSD8 79 aa5.02□□□□□ -1.61
AC138869.3-201ENST00000563960 K7ERS5 55 aa5.01□□□□□ -1.61
AC138869.3-201ENST00000563960 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
AC138869.3-201ENST00000563960 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
AC138869.3-201ENST00000563960 MYCBP2O75592 4640 aa4.96□□□□□ -1.62
AC138869.3-201ENST00000563960 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
AC138869.3-201ENST00000563960 LRP1Q07954 4544 aaKnown RBP4.95□□□□□ -1.62
AC138869.3-201ENST00000563960 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
AC138869.3-201ENST00000563960 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
AC138869.3-201ENST00000563960 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
AC138869.3-201ENST00000563960 HERC2O95714 4834 aa4.93□□□□□ -1.62
AC138869.3-201ENST00000563960 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
AC138869.3-201ENST00000563960 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
AC138869.3-201ENST00000563960 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
AC138869.3-201ENST00000563960 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
AC138869.3-201ENST00000563960 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
AC138869.3-201ENST00000563960 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
AC138869.3-201ENST00000563960 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
AC138869.3-201ENST00000563960 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
AC138869.3-201ENST00000563960 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
AC138869.3-201ENST00000563960 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
AC138869.3-201ENST00000563960 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
AC138869.3-201ENST00000563960 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
AC138869.3-201ENST00000563960 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
AC138869.3-201ENST00000563960 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
AC138869.3-201ENST00000563960 A0A0D9SG42 100 aa4.8□□□□□ -1.64
AC138869.3-201ENST00000563960 TNXBP22105 4242 aa4.8□□□□□ -1.64
AC138869.3-201ENST00000563960 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
AC138869.3-201ENST00000563960 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
AC138869.3-201ENST00000563960 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
AC138869.3-201ENST00000563960 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
AC138869.3-201ENST00000563960 HERC1Q15751 4861 aa4.74□□□□□ -1.65
AC138869.3-201ENST00000563960 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
AC138869.3-201ENST00000563960 S4R3F8 94 aa4.71□□□□□ -1.66
AC138869.3-201ENST00000563960 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
AC138869.3-201ENST00000563960 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
AC138869.3-201ENST00000563960 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
AC138869.3-201ENST00000563960 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
AC138869.3-201ENST00000563960 LPAP08519 4548 aa4.6□□□□□ -1.67
AC138869.3-201ENST00000563960 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
AC138869.3-201ENST00000563960 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
AC138869.3-201ENST00000563960 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
AC138869.3-201ENST00000563960 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
AC138869.3-201ENST00000563960 LRP2P98164 4655 aa4.56□□□□□ -1.68
AC138869.3-201ENST00000563960 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
AC138869.3-201ENST00000563960 MUC2Q02817 5179 aa4.47□□□□□ -1.69
AC138869.3-201ENST00000563960 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
AC138869.3-201ENST00000563960 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
AC138869.3-201ENST00000563960 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
AC138869.3-201ENST00000563960 M0QZ58 72 aa4.39□□□□□ -1.71
AC138869.3-201ENST00000563960 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
AC138869.3-201ENST00000563960 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
AC138869.3-201ENST00000563960 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
AC138869.3-201ENST00000563960 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
AC138869.3-201ENST00000563960 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
AC138869.3-201ENST00000563960 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
AC138869.3-201ENST00000563960 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
AC138869.3-201ENST00000563960 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
AC138869.3-201ENST00000563960 R4GN34 69 aa4.19□□□□□ -1.74
AC138869.3-201ENST00000563960 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
AC138869.3-201ENST00000563960 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
AC138869.3-201ENST00000563960 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
AC138869.3-201ENST00000563960 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
AC138869.3-201ENST00000563960 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
AC138869.3-201ENST00000563960 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
AC138869.3-201ENST00000563960 MT1HP80294 61 aa4.05□□□□□ -1.76
AC138869.3-201ENST00000563960 M0R2T5 61 aa4.04□□□□□ -1.76
AC138869.3-201ENST00000563960 INE1O15225 51 aa4.03□□□□□ -1.76
AC138869.3-201ENST00000563960 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
AC138869.3-201ENST00000563960 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
AC138869.3-201ENST00000563960 TNP1P09430 55 aa3.94□□□□□ -1.78
AC138869.3-201ENST00000563960 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
AC138869.3-201ENST00000563960 MT2AP02795 61 aa3.86□□□□□ -1.79
AC138869.3-201ENST00000563960 MT1FP04733 61 aa3.85□□□□□ -1.79
AC138869.3-201ENST00000563960 KRTAP10-10P60014 251 aa3.85□□□□□ -1.79
AC138869.3-201ENST00000563960 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
AC138869.3-201ENST00000563960 USH2AO75445 5202 aa3.75□□□□□ -1.81
AC138869.3-201ENST00000563960 LCE3AQ5TA76 89 aa3.71□□□□□ -1.81
AC138869.3-201ENST00000563960 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
AC138869.3-201ENST00000563960 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
AC138869.3-201ENST00000563960 MT1BP07438 61 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms