RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SPATA8Q6RVD6 105 aa11.05□□□□□ -0.64
VPS9D1-AS1-202ENST00000562866 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
VPS9D1-AS1-202ENST00000562866 MIR22HGQ0VDD5 57 aa11.02□□□□□ -0.65
VPS9D1-AS1-202ENST00000562866 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
VPS9D1-AS1-202ENST00000562866 A6NN06 94 aa10.93□□□□□ -0.66
VPS9D1-AS1-202ENST00000562866 ABCA13Q86UQ4 5058 aa10.91□□□□□ -0.66
VPS9D1-AS1-202ENST00000562866 S4R3F8 94 aa10.85□□□□□ -0.67
VPS9D1-AS1-202ENST00000562866 A0A1B0GU33 70 aa10.83□□□□□ -0.68
VPS9D1-AS1-202ENST00000562866 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
VPS9D1-AS1-202ENST00000562866 J3QL48 77 aa10.8□□□□□ -0.68
VPS9D1-AS1-202ENST00000562866 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
VPS9D1-AS1-202ENST00000562866 KTN1-AS1Q86SY8 53 aa10.79□□□□□ -0.68
VPS9D1-AS1-202ENST00000562866 RBM12B-AS1Q9P1G2 102 aa10.77□□□□□ -0.69
VPS9D1-AS1-202ENST00000562866 H0YAA0 97 aa10.72□□□□□ -0.69
VPS9D1-AS1-202ENST00000562866 SEC61BP60468 96 aaKnown RBP10.71□□□□□ -0.69
VPS9D1-AS1-202ENST00000562866 PCLOQ9Y6V0 5065 aa10.7□□□□□ -0.7
VPS9D1-AS1-202ENST00000562866 LRP2P98164 4655 aa10.61□□□□□ -0.71
VPS9D1-AS1-202ENST00000562866 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
VPS9D1-AS1-202ENST00000562866 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
VPS9D1-AS1-202ENST00000562866 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
VPS9D1-AS1-202ENST00000562866 LPAP08519 4548 aa10.54□□□□□ -0.72
VPS9D1-AS1-202ENST00000562866 K7ERS5 55 aa10.47□□□□□ -0.73
VPS9D1-AS1-202ENST00000562866 ADM2Q7Z4H4 148 aa10.44□□□□□ -0.74
VPS9D1-AS1-202ENST00000562866 P0C880 135 aa10.42□□□□□ -0.74
VPS9D1-AS1-202ENST00000562866 KRTAP13-4Q3LI77 160 aa10.37□□□□□ -0.75
VPS9D1-AS1-202ENST00000562866 HERC1Q15751 4861 aa10.37□□□□□ -0.75
VPS9D1-AS1-202ENST00000562866 KRTAP4-1Q9BYQ7 146 aa10.35□□□□□ -0.75
VPS9D1-AS1-202ENST00000562866 PRAC1Q96KF2 57 aa10.3□□□□□ -0.76
VPS9D1-AS1-202ENST00000562866 MUC17Q685J3 4493 aa10.3□□□□□ -0.76
VPS9D1-AS1-202ENST00000562866 A0A0D9SG42 100 aa10.27□□□□□ -0.77
VPS9D1-AS1-202ENST00000562866 M0QZ58 72 aa10.26□□□□□ -0.77
VPS9D1-AS1-202ENST00000562866 KRTAP19-2Q3LHN2 52 aa10.16□□□□□ -0.78
VPS9D1-AS1-202ENST00000562866 HMCN2Q8NDA2 5059 aa10.1□□□□□ -0.79
VPS9D1-AS1-202ENST00000562866 ROMO1P60602 79 aa10.09□□□□□ -0.79
VPS9D1-AS1-202ENST00000562866 KRTAP12-1P59990 96 aa10.03□□□□□ -0.8
VPS9D1-AS1-202ENST00000562866 KRTAP12-2P59991 146 aa10.03□□□□□ -0.8
VPS9D1-AS1-202ENST00000562866 R4GN34 69 aa10.03□□□□□ -0.8
VPS9D1-AS1-202ENST00000562866 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
VPS9D1-AS1-202ENST00000562866 KRTAP25-1Q3LHN0 102 aa9.96□□□□□ -0.82
VPS9D1-AS1-202ENST00000562866 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
VPS9D1-AS1-202ENST00000562866 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
VPS9D1-AS1-202ENST00000562866 FLGP20930 4061 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-AS1-202ENST00000562866 CRIPTQ9P021 101 aa9.78□□□□□ -0.84
VPS9D1-AS1-202ENST00000562866 UBR4Q5T4S7 5183 aa9.73□□□□□ -0.85
VPS9D1-AS1-202ENST00000562866 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
VPS9D1-AS1-202ENST00000562866 MUC2Q02817 5179 aa9.67□□□□□ -0.86
VPS9D1-AS1-202ENST00000562866 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
VPS9D1-AS1-202ENST00000562866 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
VPS9D1-AS1-202ENST00000562866 M0R2T5 61 aa9.52□□□□□ -0.88
VPS9D1-AS1-202ENST00000562866 MT1HP80294 61 aa9.51□□□□□ -0.89
VPS9D1-AS1-202ENST00000562866 CAMK2N1Q7Z7J9 78 aa9.48□□□□□ -0.89
VPS9D1-AS1-202ENST00000562866 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
VPS9D1-AS1-202ENST00000562866 MT2AP02795 61 aa9.27□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 MT1FP04733 61 aa9.22□□□□□ -0.93
VPS9D1-AS1-202ENST00000562866 PP632Q6XCG6 107 aa9.17□□□□□ -0.94
VPS9D1-AS1-202ENST00000562866 TNP1P09430 55 aa9.11□□□□□ -0.95
VPS9D1-AS1-202ENST00000562866 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
VPS9D1-AS1-202ENST00000562866 KRTAP23-1A1A580 65 aa9□□□□□ -0.97
VPS9D1-AS1-202ENST00000562866 KRTAP15-1Q3LI76 137 aa8.94□□□□□ -0.98
VPS9D1-AS1-202ENST00000562866 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
VPS9D1-AS1-202ENST00000562866 KRTAP9-3Q9BYQ3 159 aa8.88□□□□□ -0.99
VPS9D1-AS1-202ENST00000562866 MT1BP07438 61 aa8.85□□□□□ -0.99
VPS9D1-AS1-202ENST00000562866 KRTAP10-5P60370 271 aa8.69□□□□□ -1.02
VPS9D1-AS1-202ENST00000562866 MT1XP80297 61 aa8.69□□□□□ -1.02
VPS9D1-AS1-202ENST00000562866 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
VPS9D1-AS1-202ENST00000562866 LCE3AQ5TA76 89 aa8.58□□□□□ -1.04
VPS9D1-AS1-202ENST00000562866 LCE2BO14633 110 aa8.52□□□□□ -1.05
VPS9D1-AS1-202ENST00000562866 NDUFAF8A1L188 74 aa8.5□□□□□ -1.05
VPS9D1-AS1-202ENST00000562866 KRTAP10-12P60413 245 aa8.45□□□□□ -1.06
VPS9D1-AS1-202ENST00000562866 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
VPS9D1-AS1-202ENST00000562866 H3BS24 57 aa8.37□□□□□ -1.07
VPS9D1-AS1-202ENST00000562866 KRTAP10-7P60409 375 aaPredicted RBP8.37□□□□□ -1.07
VPS9D1-AS1-202ENST00000562866 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
VPS9D1-AS1-202ENST00000562866 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
VPS9D1-AS1-202ENST00000562866 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
VPS9D1-AS1-202ENST00000562866 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-AS1-202ENST00000562866 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
VPS9D1-AS1-202ENST00000562866 USH2AO75445 5202 aa8.08□□□□□ -1.12
VPS9D1-AS1-202ENST00000562866 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
VPS9D1-AS1-202ENST00000562866 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
VPS9D1-AS1-202ENST00000562866 SSPOA2VEC9 5147 aa7.9□□□□□ -1.14
VPS9D1-AS1-202ENST00000562866 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
VPS9D1-AS1-202ENST00000562866 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
VPS9D1-AS1-202ENST00000562866 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
VPS9D1-AS1-202ENST00000562866 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
VPS9D1-AS1-202ENST00000562866 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
VPS9D1-AS1-202ENST00000562866 LCE3CQ5T5A8 94 aa7.74□□□□□ -1.17
VPS9D1-AS1-202ENST00000562866 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
VPS9D1-AS1-202ENST00000562866 A0A0A0MQY5 61 aa7.64□□□□□ -1.19
VPS9D1-AS1-202ENST00000562866 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
VPS9D1-AS1-202ENST00000562866 KMT2DO14686 5537 aa7.62□□□□□ -1.19
VPS9D1-AS1-202ENST00000562866 FCGBPQ9Y6R7 5405 aaPredicted RBP7.62□□□□□ -1.19
VPS9D1-AS1-202ENST00000562866 MT1EP04732 61 aa7.59□□□□□ -1.2
VPS9D1-AS1-202ENST00000562866 MT1LQ93083 61 aa7.51□□□□□ -1.21
VPS9D1-AS1-202ENST00000562866 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms