RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 LRP2P98164 4655 aa9.44□□□□□ -0.9
AC009041.2-203ENST00000562570 A0A0D9SG42 100 aa9.39□□□□□ -0.91
AC009041.2-203ENST00000562570 A8MUU9 505 aa9.37□□□□□ -0.91
AC009041.2-203ENST00000562570 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
AC009041.2-203ENST00000562570 ABCA13Q86UQ4 5058 aa9.36□□□□□ -0.91
AC009041.2-203ENST00000562570 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
AC009041.2-203ENST00000562570 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
AC009041.2-203ENST00000562570 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
AC009041.2-203ENST00000562570 A0A1B0GU33 70 aa9.27□□□□□ -0.93
AC009041.2-203ENST00000562570 MUC2Q02817 5179 aa9.26□□□□□ -0.93
AC009041.2-203ENST00000562570 TNXBP22105 4242 aa9.25□□□□□ -0.93
AC009041.2-203ENST00000562570 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
AC009041.2-203ENST00000562570 H0YAA0 97 aa9.23□□□□□ -0.93
AC009041.2-203ENST00000562570 LINC01554Q52M75 96 aa9.23□□□□□ -0.93
AC009041.2-203ENST00000562570 XP32Q5T750 250 aa9.23□□□□□ -0.93
AC009041.2-203ENST00000562570 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
AC009041.2-203ENST00000562570 HERC2O95714 4834 aa9.16□□□□□ -0.94
AC009041.2-203ENST00000562570 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
AC009041.2-203ENST00000562570 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
AC009041.2-203ENST00000562570 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
AC009041.2-203ENST00000562570 P0C880 135 aa9.05□□□□□ -0.96
AC009041.2-203ENST00000562570 S4R3F8 94 aa9.05□□□□□ -0.96
AC009041.2-203ENST00000562570 BIRC6Q9NR09 4857 aa9.02□□□□□ -0.97
AC009041.2-203ENST00000562570 J3QL48 77 aa8.99□□□□□ -0.97
AC009041.2-203ENST00000562570 SPINT4Q6UDR6 99 aa8.99□□□□□ -0.97
AC009041.2-203ENST00000562570 KRTAP13-4Q3LI77 160 aa8.98□□□□□ -0.97
AC009041.2-203ENST00000562570 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
AC009041.2-203ENST00000562570 HERC1Q15751 4861 aa8.93□□□□□ -0.98
AC009041.2-203ENST00000562570 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
AC009041.2-203ENST00000562570 K7ERS5 55 aa8.92□□□□□ -0.98
AC009041.2-203ENST00000562570 KRTAP25-1Q3LHN0 102 aa8.86□□□□□ -0.99
AC009041.2-203ENST00000562570 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
AC009041.2-203ENST00000562570 C10orf95Q9H7T3 257 aa8.82□□□□□ -1
AC009041.2-203ENST00000562570 RNF213Q63HN8 5207 aa8.77□□□□□ -1.01
AC009041.2-203ENST00000562570 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
AC009041.2-203ENST00000562570 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
AC009041.2-203ENST00000562570 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
AC009041.2-203ENST00000562570 M0QZ58 72 aa8.67□□□□□ -1.02
AC009041.2-203ENST00000562570 ROMO1P60602 79 aa8.65□□□□□ -1.02
AC009041.2-203ENST00000562570 TPRXLQ17RH7 258 aa8.65□□□□□ -1.03
AC009041.2-203ENST00000562570 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
AC009041.2-203ENST00000562570 R4GN34 69 aa8.61□□□□□ -1.03
AC009041.2-203ENST00000562570 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
AC009041.2-203ENST00000562570 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
AC009041.2-203ENST00000562570 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
AC009041.2-203ENST00000562570 KRTAP12-1P59990 96 aa8.46□□□□□ -1.05
AC009041.2-203ENST00000562570 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
AC009041.2-203ENST00000562570 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
AC009041.2-203ENST00000562570 A0A0A0MQY5 61 aa8.3□□□□□ -1.08
AC009041.2-203ENST00000562570 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
AC009041.2-203ENST00000562570 M0R2T5 61 aa8.29□□□□□ -1.08
AC009041.2-203ENST00000562570 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
AC009041.2-203ENST00000562570 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
AC009041.2-203ENST00000562570 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
AC009041.2-203ENST00000562570 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
AC009041.2-203ENST00000562570 USH2AO75445 5202 aa7.86□□□□□ -1.15
AC009041.2-203ENST00000562570 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
AC009041.2-203ENST00000562570 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
AC009041.2-203ENST00000562570 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
AC009041.2-203ENST00000562570 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
AC009041.2-203ENST00000562570 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
AC009041.2-203ENST00000562570 MT1HP80294 61 aa7.64□□□□□ -1.19
AC009041.2-203ENST00000562570 TNP1P09430 55 aa7.63□□□□□ -1.19
AC009041.2-203ENST00000562570 KMT2DO14686 5537 aa7.6□□□□□ -1.19
AC009041.2-203ENST00000562570 MT1FP04733 61 aa7.58□□□□□ -1.2
AC009041.2-203ENST00000562570 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
AC009041.2-203ENST00000562570 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
AC009041.2-203ENST00000562570 MT2AP02795 61 aa7.5□□□□□ -1.21
AC009041.2-203ENST00000562570 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
AC009041.2-203ENST00000562570 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
AC009041.2-203ENST00000562570 SPRR2GQ9BYE4 73 aa7.33□□□□□ -1.24
AC009041.2-203ENST00000562570 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
AC009041.2-203ENST00000562570 MT1BP07438 61 aa7.14□□□□□ -1.27
AC009041.2-203ENST00000562570 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
AC009041.2-203ENST00000562570 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
AC009041.2-203ENST00000562570 MT1XP80297 61 aa7.08□□□□□ -1.28
AC009041.2-203ENST00000562570 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
AC009041.2-203ENST00000562570 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
AC009041.2-203ENST00000562570 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
AC009041.2-203ENST00000562570 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
AC009041.2-203ENST00000562570 LCE2BO14633 110 aa6.96□□□□□ -1.29
AC009041.2-203ENST00000562570 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.3
AC009041.2-203ENST00000562570 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
AC009041.2-203ENST00000562570 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
AC009041.2-203ENST00000562570 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
AC009041.2-203ENST00000562570 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
AC009041.2-203ENST00000562570 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
AC009041.2-203ENST00000562570 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
AC009041.2-203ENST00000562570 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
AC009041.2-203ENST00000562570 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
AC009041.2-203ENST00000562570 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
AC009041.2-203ENST00000562570 OBSCNQ5VST9 7968 aa6.71□□□□□ -1.33
AC009041.2-203ENST00000562570 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
AC009041.2-203ENST00000562570 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
AC009041.2-203ENST00000562570 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
AC009041.2-203ENST00000562570 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
AC009041.2-203ENST00000562570 INE1O15225 51 aa6.38□□□□□ -1.39
AC009041.2-203ENST00000562570 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
AC009041.2-203ENST00000562570 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
AC009041.2-203ENST00000562570 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms