RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 HERC1Q15751 4861 aa6.51□□□□□ -1.37
AC055717.2-201ENST00000561864 SEC61GP60059 68 aa6.49□□□□□ -1.37
AC055717.2-201ENST00000561864 LCA10Q71F78 164 aa6.48□□□□□ -1.37
AC055717.2-201ENST00000561864 A8MU10 97 aa6.43□□□□□ -1.38
AC055717.2-201ENST00000561864 UQCR11O14957 56 aa6.43□□□□□ -1.38
AC055717.2-201ENST00000561864 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
AC055717.2-201ENST00000561864 S4R3F8 94 aa6.41□□□□□ -1.38
AC055717.2-201ENST00000561864 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.38
AC055717.2-201ENST00000561864 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
AC055717.2-201ENST00000561864 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
AC055717.2-201ENST00000561864 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
AC055717.2-201ENST00000561864 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
AC055717.2-201ENST00000561864 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
AC055717.2-201ENST00000561864 A0A1B0GU33 70 aa6.31□□□□□ -1.4
AC055717.2-201ENST00000561864 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
AC055717.2-201ENST00000561864 A6NN06 94 aa6.27□□□□□ -1.41
AC055717.2-201ENST00000561864 LRP2P98164 4655 aa6.27□□□□□ -1.41
AC055717.2-201ENST00000561864 LPAP08519 4548 aa6.26□□□□□ -1.41
AC055717.2-201ENST00000561864 H0YAA0 97 aa6.24□□□□□ -1.41
AC055717.2-201ENST00000561864 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
AC055717.2-201ENST00000561864 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
AC055717.2-201ENST00000561864 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
AC055717.2-201ENST00000561864 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
AC055717.2-201ENST00000561864 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
AC055717.2-201ENST00000561864 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
AC055717.2-201ENST00000561864 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
AC055717.2-201ENST00000561864 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
AC055717.2-201ENST00000561864 P0C880 135 aa6.11□□□□□ -1.43
AC055717.2-201ENST00000561864 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
AC055717.2-201ENST00000561864 K7ERS5 55 aa6.08□□□□□ -1.44
AC055717.2-201ENST00000561864 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
AC055717.2-201ENST00000561864 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
AC055717.2-201ENST00000561864 M0QZ58 72 aa6.03□□□□□ -1.44
AC055717.2-201ENST00000561864 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
AC055717.2-201ENST00000561864 MUC2Q02817 5179 aa5.98□□□□□ -1.45
AC055717.2-201ENST00000561864 A0A0D9SG42 100 aa5.98□□□□□ -1.45
AC055717.2-201ENST00000561864 R4GN34 69 aa5.9□□□□□ -1.46
AC055717.2-201ENST00000561864 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
AC055717.2-201ENST00000561864 PRAC1Q96KF2 57 aa5.87□□□□□ -1.47
AC055717.2-201ENST00000561864 LCE2CQ5TA81 110 aa5.86□□□□□ -1.47
AC055717.2-201ENST00000561864 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
AC055717.2-201ENST00000561864 ROMO1P60602 79 aa5.85□□□□□ -1.47
AC055717.2-201ENST00000561864 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
AC055717.2-201ENST00000561864 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
AC055717.2-201ENST00000561864 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
AC055717.2-201ENST00000561864 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
AC055717.2-201ENST00000561864 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
AC055717.2-201ENST00000561864 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
AC055717.2-201ENST00000561864 MT1HP80294 61 aa5.73□□□□□ -1.49
AC055717.2-201ENST00000561864 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
AC055717.2-201ENST00000561864 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
AC055717.2-201ENST00000561864 M0R2T5 61 aa5.69□□□□□ -1.5
AC055717.2-201ENST00000561864 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
AC055717.2-201ENST00000561864 MT2AP02795 61 aa5.57□□□□□ -1.52
AC055717.2-201ENST00000561864 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
AC055717.2-201ENST00000561864 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
AC055717.2-201ENST00000561864 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
AC055717.2-201ENST00000561864 MT1FP04733 61 aa5.53□□□□□ -1.52
AC055717.2-201ENST00000561864 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
AC055717.2-201ENST00000561864 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
AC055717.2-201ENST00000561864 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
AC055717.2-201ENST00000561864 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
AC055717.2-201ENST00000561864 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
AC055717.2-201ENST00000561864 TNP1P09430 55 aa5.35□□□□□ -1.55
AC055717.2-201ENST00000561864 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
AC055717.2-201ENST00000561864 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
AC055717.2-201ENST00000561864 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
AC055717.2-201ENST00000561864 MT1BP07438 61 aa5.3□□□□□ -1.56
AC055717.2-201ENST00000561864 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
AC055717.2-201ENST00000561864 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
AC055717.2-201ENST00000561864 MT1XP80297 61 aa5.18□□□□□ -1.58
AC055717.2-201ENST00000561864 LCE2BO14633 110 aa5.14□□□□□ -1.59
AC055717.2-201ENST00000561864 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
AC055717.2-201ENST00000561864 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
AC055717.2-201ENST00000561864 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
AC055717.2-201ENST00000561864 USH2AO75445 5202 aa5.1□□□□□ -1.59
AC055717.2-201ENST00000561864 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
AC055717.2-201ENST00000561864 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
AC055717.2-201ENST00000561864 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
AC055717.2-201ENST00000561864 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
AC055717.2-201ENST00000561864 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
AC055717.2-201ENST00000561864 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
AC055717.2-201ENST00000561864 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
AC055717.2-201ENST00000561864 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
AC055717.2-201ENST00000561864 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
AC055717.2-201ENST00000561864 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
AC055717.2-201ENST00000561864 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
AC055717.2-201ENST00000561864 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
AC055717.2-201ENST00000561864 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
AC055717.2-201ENST00000561864 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
AC055717.2-201ENST00000561864 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
AC055717.2-201ENST00000561864 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
AC055717.2-201ENST00000561864 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
AC055717.2-201ENST00000561864 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
AC055717.2-201ENST00000561864 H3BS24 57 aa4.62□□□□□ -1.67
AC055717.2-201ENST00000561864 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
AC055717.2-201ENST00000561864 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
AC055717.2-201ENST00000561864 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
AC055717.2-201ENST00000561864 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
AC055717.2-201ENST00000561864 MT1EP04732 61 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms