RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 COX6B2Q6YFQ2 88 aa13.12□□□□□ -0.31
SHF-208ENST00000560734 KRTAP3-1Q9BYR8 98 aa13.11□□□□□ -0.31
SHF-208ENST00000560734 PMAIP1Q13794 54 aa13.06□□□□□ -0.32
SHF-208ENST00000560734 J3QL48 77 aa13.03□□□□□ -0.32
SHF-208ENST00000560734 UQCR11O14957 56 aa12.96□□□□□ -0.33
SHF-208ENST00000560734 SPATA8Q6RVD6 105 aa12.96□□□□□ -0.33
SHF-208ENST00000560734 SEC61GP60059 68 aa12.93□□□□□ -0.34
SHF-208ENST00000560734 A6NN06 94 aa12.92□□□□□ -0.34
SHF-208ENST00000560734 MIR22HGQ0VDD5 57 aa12.85□□□□□ -0.35
SHF-208ENST00000560734 KTN1-AS1Q86SY8 53 aa12.79□□□□□ -0.36
SHF-208ENST00000560734 HMCN2Q8NDA2 5059 aa12.77□□□□□ -0.37
SHF-208ENST00000560734 SEC61BP60468 96 aaKnown RBP12.75□□□□□ -0.37
SHF-208ENST00000560734 H1FX-AS1Q4G0G2 97 aa12.68□□□□□ -0.38
SHF-208ENST00000560734 RBM12B-AS1Q9P1G2 102 aa12.67□□□□□ -0.38
SHF-208ENST00000560734 LRP2P98164 4655 aa12.66□□□□□ -0.38
SHF-208ENST00000560734 S4R3F8 94 aa12.65□□□□□ -0.38
SHF-208ENST00000560734 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
SHF-208ENST00000560734 LPAP08519 4548 aa12.57□□□□□ -0.4
SHF-208ENST00000560734 A0A1B0GU33 70 aa12.57□□□□□ -0.4
SHF-208ENST00000560734 UBR4Q5T4S7 5183 aa12.51□□□□□ -0.41
SHF-208ENST00000560734 H0YAA0 97 aa12.47□□□□□ -0.41
SHF-208ENST00000560734 MUC17Q685J3 4493 aa12.35□□□□□ -0.43
SHF-208ENST00000560734 CSAG1Q6PB30 78 aa12.35□□□□□ -0.43
SHF-208ENST00000560734 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
SHF-208ENST00000560734 KRTAP10-6P60371 365 aaPredicted RBP12.32□□□□□ -0.44
SHF-208ENST00000560734 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
SHF-208ENST00000560734 RNF213Q63HN8 5207 aa12.19□□□□□ -0.46
SHF-208ENST00000560734 K7ERS5 55 aa12.17□□□□□ -0.46
SHF-208ENST00000560734 KRTAP19-2Q3LHN2 52 aa12.16□□□□□ -0.46
SHF-208ENST00000560734 ADM2Q7Z4H4 148 aa12.12□□□□□ -0.47
SHF-208ENST00000560734 P0C880 135 aa12.09□□□□□ -0.47
SHF-208ENST00000560734 PRAC1Q96KF2 57 aa12.08□□□□□ -0.48
SHF-208ENST00000560734 KRTAP13-4Q3LI77 160 aa12□□□□□ -0.49
SHF-208ENST00000560734 M0QZ58 72 aa11.95□□□□□ -0.5
SHF-208ENST00000560734 MUC2Q02817 5179 aa11.81□□□□□ -0.52
SHF-208ENST00000560734 A0A0D9SG42 100 aa11.8□□□□□ -0.52
SHF-208ENST00000560734 ROMO1P60602 79 aa11.77□□□□□ -0.52
SHF-208ENST00000560734 FLGP20930 4061 aaPredicted RBP11.77□□□□□ -0.53
SHF-208ENST00000560734 LINC01554Q52M75 96 aa11.77□□□□□ -0.53
SHF-208ENST00000560734 KRTAP25-1Q3LHN0 102 aa11.72□□□□□ -0.53
SHF-208ENST00000560734 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
SHF-208ENST00000560734 R4GN34 69 aa11.67□□□□□ -0.54
SHF-208ENST00000560734 KRTAP12-1P59990 96 aa11.63□□□□□ -0.55
SHF-208ENST00000560734 KRTAP12-2P59991 146 aa11.6□□□□□ -0.55
SHF-208ENST00000560734 CRIPTQ9P021 101 aa11.54□□□□□ -0.56
SHF-208ENST00000560734 LORP23490 312 aaPredicted RBP11.52□□□□□ -0.57
SHF-208ENST00000560734 SPINT4Q6UDR6 99 aa11.49□□□□□ -0.57
SHF-208ENST00000560734 FAT4Q6V0I7 4981 aa11.47□□□□□ -0.57
SHF-208ENST00000560734 MT1HP80294 61 aa11.4□□□□□ -0.58
SHF-208ENST00000560734 LCE2AQ5TA79 106 aaPredicted RBP11.4□□□□□ -0.58
SHF-208ENST00000560734 M0R2T5 61 aa11.29□□□□□ -0.6
SHF-208ENST00000560734 SPRR2GQ9BYE4 73 aa11.13□□□□□ -0.63
SHF-208ENST00000560734 C10orf95Q9H7T3 257 aa11.07□□□□□ -0.64
SHF-208ENST00000560734 KRTAP9-8Q9BYQ0 159 aa11.06□□□□□ -0.64
SHF-208ENST00000560734 KRTAP9-2Q9BYQ4 174 aa11.06□□□□□ -0.64
SHF-208ENST00000560734 MT2AP02795 61 aa11.06□□□□□ -0.64
SHF-208ENST00000560734 KRTAP19-1Q8IUB9 90 aa10.99□□□□□ -0.65
SHF-208ENST00000560734 MT1FP04733 61 aa10.98□□□□□ -0.65
SHF-208ENST00000560734 KRTAP10-10P60014 251 aa10.97□□□□□ -0.65
SHF-208ENST00000560734 CAMK2N1Q7Z7J9 78 aa10.97□□□□□ -0.65
SHF-208ENST00000560734 PLAC4Q8WY50 150 aa10.82□□□□□ -0.68
SHF-208ENST00000560734 KRTAP19-8Q3LI54 63 aa10.77□□□□□ -0.69
SHF-208ENST00000560734 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
SHF-208ENST00000560734 PP632Q6XCG6 107 aa10.71□□□□□ -0.69
SHF-208ENST00000560734 KRTAP9-3Q9BYQ3 159 aa10.66□□□□□ -0.7
SHF-208ENST00000560734 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
SHF-208ENST00000560734 KRTAP15-1Q3LI76 137 aa10.59□□□□□ -0.71
SHF-208ENST00000560734 TNP1P09430 55 aa10.57□□□□□ -0.72
SHF-208ENST00000560734 KRTAP23-1A1A580 65 aa10.55□□□□□ -0.72
SHF-208ENST00000560734 MT1BP07438 61 aa10.53□□□□□ -0.72
SHF-208ENST00000560734 FSIP2Q5CZC0 6907 aa10.51□□□□□ -0.73
SHF-208ENST00000560734 CRCT1Q9UGL9 99 aa10.44□□□□□ -0.74
SHF-208ENST00000560734 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
SHF-208ENST00000560734 MT1XP80297 61 aa10.28□□□□□ -0.76
SHF-208ENST00000560734 LCE2BO14633 110 aa10.24□□□□□ -0.77
SHF-208ENST00000560734 PRO2289Q9P1D8 64 aa10.19□□□□□ -0.78
SHF-208ENST00000560734 USH2AO75445 5202 aa10.08□□□□□ -0.8
SHF-208ENST00000560734 H3BS24 57 aa10.08□□□□□ -0.8
SHF-208ENST00000560734 NDUFAF8A1L188 74 aa10.04□□□□□ -0.8
SHF-208ENST00000560734 SSPOA2VEC9 5147 aa10□□□□□ -0.81
SHF-208ENST00000560734 LCE3AQ5TA76 89 aa9.97□□□□□ -0.81
SHF-208ENST00000560734 KRTAP10-12P60413 245 aa9.9□□□□□ -0.83
SHF-208ENST00000560734 KRTAP8-1Q8IUC2 63 aa9.9□□□□□ -0.83
SHF-208ENST00000560734 KRTAP10-7P60409 375 aaPredicted RBP9.85□□□□□ -0.83
SHF-208ENST00000560734 SPRR5A0A1B0GTR4 108 aa9.79□□□□□ -0.84
SHF-208ENST00000560734 LUZP6Q538Z0 58 aa9.79□□□□□ -0.84
SHF-208ENST00000560734 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
SHF-208ENST00000560734 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.73□□□□□ -0.85
SHF-208ENST00000560734 KRTAP12-3P60328 96 aa9.61□□□□□ -0.87
SHF-208ENST00000560734 KRTAP9-7A8MTY7 169 aa9.59□□□□□ -0.87
SHF-208ENST00000560734 KRTAP19-6Q3LI70 58 aa9.59□□□□□ -0.87
SHF-208ENST00000560734 MACF1Q9UPN3 7388 aaKnown RBP9.38□□□□□ -0.91
SHF-208ENST00000560734 KRTAP19-5Q3LI72 72 aa9.36□□□□□ -0.91
SHF-208ENST00000560734 KRTAP4-8A0A0G2JLE6 195 aa9.31□□□□□ -0.92
SHF-208ENST00000560734 KRTAP4-8Q9BYQ9 185 aa9.31□□□□□ -0.92
SHF-208ENST00000560734 SYNE2Q8WXH0 6885 aaKnown RBP9.26□□□□□ -0.93
SHF-208ENST00000560734 KRTAP19-7Q3SYF9 63 aa9.17□□□□□ -0.94
SHF-208ENST00000560734 KRTAP19-4Q3LI73 84 aa9.16□□□□□ -0.94
SHF-208ENST00000560734 A0A0A0MQY5 61 aa9.08□□□□□ -0.96
SHF-208ENST00000560734 KRTAP6-3Q3LI67 103 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms