RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 Q6ZSA8 131 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 LINC00304Q8N9R0 145 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 ROMO1P60602 79 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 A0A1B0GU33 70 aa2.82□□□□□ -1.96
HMG20A-204ENST00000558288 APOBP04114 4563 aaKnown RBP2.82□□□□□ -1.96
HMG20A-204ENST00000558288 KRTAP13-2Q52LG2 175 aa2.82□□□□□ -1.96
HMG20A-204ENST00000558288 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
HMG20A-204ENST00000558288 MYCBP2O75592 4640 aa2.82□□□□□ -1.96
HMG20A-204ENST00000558288 K7ERS5 55 aa2.81□□□□□ -1.96
HMG20A-204ENST00000558288 DNAH8Q96JB1 4490 aa2.8□□□□□ -1.96
HMG20A-204ENST00000558288 HSPG2P98160 4391 aa2.8□□□□□ -1.96
HMG20A-204ENST00000558288 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
HMG20A-204ENST00000558288 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
HMG20A-204ENST00000558288 PKD1P98161 4303 aa2.78□□□□□ -1.96
HMG20A-204ENST00000558288 DNAH6Q9C0G6 4158 aa2.78□□□□□ -1.96
HMG20A-204ENST00000558288 DNAH17Q9UFH2 4485 aa2.77□□□□□ -1.97
HMG20A-204ENST00000558288 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
HMG20A-204ENST00000558288 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
HMG20A-204ENST00000558288 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
HMG20A-204ENST00000558288 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
HMG20A-204ENST00000558288 P0C880 135 aa2.74□□□□□ -1.97
HMG20A-204ENST00000558288 A0A0D9SG42 100 aa2.73□□□□□ -1.97
HMG20A-204ENST00000558288 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
HMG20A-204ENST00000558288 VPS13BQ7Z7G8 4022 aa2.72□□□□□ -1.97
HMG20A-204ENST00000558288 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
HMG20A-204ENST00000558288 KRTAP3-1Q9BYR8 98 aa2.72□□□□□ -1.97
HMG20A-204ENST00000558288 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
HMG20A-204ENST00000558288 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
HMG20A-204ENST00000558288 RPL37P61927 97 aaKnown RBP2.7□□□□□ -1.98
HMG20A-204ENST00000558288 RNF213Q63HN8 5207 aa2.69□□□□□ -1.98
HMG20A-204ENST00000558288 FAT3Q8TDW7 4589 aa2.69□□□□□ -1.98
HMG20A-204ENST00000558288 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
HMG20A-204ENST00000558288 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
HMG20A-204ENST00000558288 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
HMG20A-204ENST00000558288 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
HMG20A-204ENST00000558288 LRP2P98164 4655 aa2.67□□□□□ -1.98
HMG20A-204ENST00000558288 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.66□□□□□ -1.98
HMG20A-204ENST00000558288 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
HMG20A-204ENST00000558288 KRTAP9-6A0A140TA67 174 aa2.64□□□□□ -1.99
HMG20A-204ENST00000558288 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
HMG20A-204ENST00000558288 RPS29P62273 56 aaKnown RBP2.64□□□□□ -1.99
HMG20A-204ENST00000558288 MT1HL1P0DM35 61 aa2.63□□□□□ -1.99
HMG20A-204ENST00000558288 KRTAP10-6P60371 365 aaPredicted RBP2.62□□□□□ -1.99
HMG20A-204ENST00000558288 KRTAP10-4P60372 401 aaPredicted RBP2.62□□□□□ -1.99
HMG20A-204ENST00000558288 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
HMG20A-204ENST00000558288 S4R3F8 94 aa2.61□□□□□ -1.99
HMG20A-204ENST00000558288 KRTAP15-1Q3LI76 137 aa2.6□□□□□ -1.99
HMG20A-204ENST00000558288 KRTAP12-2P59991 146 aa2.58□□□□□ -2
HMG20A-204ENST00000558288 LCE3BQ5TA77 95 aa2.57□□□□□ -2
HMG20A-204ENST00000558288 KRTAP10-8P60410 259 aa2.56□□□□□ -2
HMG20A-204ENST00000558288 FSIP2Q5CZC0 6907 aa2.55□□□□□ -2
HMG20A-204ENST00000558288 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
HMG20A-204ENST00000558288 KRTAP12-1P59990 96 aa2.54□□□□□ -2
HMG20A-204ENST00000558288 LPAP08519 4548 aa2.53□□□□□ -2
HMG20A-204ENST00000558288 MUC2Q02817 5179 aa2.52□□□□□ -2.01
HMG20A-204ENST00000558288 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
HMG20A-204ENST00000558288 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
HMG20A-204ENST00000558288 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
HMG20A-204ENST00000558288 M0R2T5 61 aa2.5□□□□□ -2.01
HMG20A-204ENST00000558288 PKHD1L1Q86WI1 4243 aa2.49□□□□□ -2.01
HMG20A-204ENST00000558288 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
HMG20A-204ENST00000558288 M0QZ58 72 aa2.48□□□□□ -2.01
HMG20A-204ENST00000558288 PLAC4Q8WY50 150 aa2.46□□□□□ -2.01
HMG20A-204ENST00000558288 SEC61BP60468 96 aaKnown RBP2.45□□□□□ -2.02
HMG20A-204ENST00000558288 R4GN34 69 aa2.45□□□□□ -2.02
HMG20A-204ENST00000558288 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
HMG20A-204ENST00000558288 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
HMG20A-204ENST00000558288 TNXBP22105 4242 aa2.43□□□□□ -2.02
HMG20A-204ENST00000558288 FAT4Q6V0I7 4981 aa2.42□□□□□ -2.02
HMG20A-204ENST00000558288 LCE1DQ5T752 114 aa2.4□□□□□ -2.02
HMG20A-204ENST00000558288 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
HMG20A-204ENST00000558288 KRTAP23-1A1A580 65 aa2.35□□□□□ -2.03
HMG20A-204ENST00000558288 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
HMG20A-204ENST00000558288 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
HMG20A-204ENST00000558288 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.04
HMG20A-204ENST00000558288 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
HMG20A-204ENST00000558288 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
HMG20A-204ENST00000558288 MT1HP80294 61 aa2.26□□□□□ -2.05
HMG20A-204ENST00000558288 TNP1P09430 55 aa2.25□□□□□ -2.05
HMG20A-204ENST00000558288 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
HMG20A-204ENST00000558288 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
HMG20A-204ENST00000558288 LCE4AQ5TA78 99 aa2.21□□□□□ -2.06
HMG20A-204ENST00000558288 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
HMG20A-204ENST00000558288 USH2AO75445 5202 aa2.19□□□□□ -2.06
HMG20A-204ENST00000558288 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
HMG20A-204ENST00000558288 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
HMG20A-204ENST00000558288 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
HMG20A-204ENST00000558288 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
HMG20A-204ENST00000558288 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
HMG20A-204ENST00000558288 KRTAP9-8Q9BYQ0 159 aa2.15□□□□□ -2.07
HMG20A-204ENST00000558288 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
HMG20A-204ENST00000558288 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
HMG20A-204ENST00000558288 LCE5AQ5TCM9 118 aa2.12□□□□□ -2.07
HMG20A-204ENST00000558288 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
HMG20A-204ENST00000558288 LCE3AQ5TA76 89 aa2.1□□□□□ -2.07
HMG20A-204ENST00000558288 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
HMG20A-204ENST00000558288 MT2AP02795 61 aa2.1□□□□□ -2.07
HMG20A-204ENST00000558288 MT1FP04733 61 aa2.09□□□□□ -2.07
HMG20A-204ENST00000558288 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms