RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PKD1P98161 4303 aa4.64□□□□□ -1.67
SPG11-209ENST00000558253 SPINK7P58062 85 aa4.64□□□□□ -1.67
SPG11-209ENST00000558253 RETNLBQ9BQ08 111 aa4.63□□□□□ -1.67
SPG11-209ENST00000558253 LRP1BQ9NZR2 4599 aa4.62□□□□□ -1.67
SPG11-209ENST00000558253 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
SPG11-209ENST00000558253 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SPG11-209ENST00000558253 SPATA8Q6RVD6 105 aa4.62□□□□□ -1.67
SPG11-209ENST00000558253 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
SPG11-209ENST00000558253 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
SPG11-209ENST00000558253 A8MUU9 505 aa4.6□□□□□ -1.67
SPG11-209ENST00000558253 UQCR11O14957 56 aa4.59□□□□□ -1.67
SPG11-209ENST00000558253 SMR3BP02814 79 aaPredicted RBP4.59□□□□□ -1.67
SPG11-209ENST00000558253 A0A1B0GU69 56 aa4.58□□□□□ -1.68
SPG11-209ENST00000558253 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
SPG11-209ENST00000558253 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
SPG11-209ENST00000558253 SACSQ9NZJ4 4579 aa4.52□□□□□ -1.69
SPG11-209ENST00000558253 VPS13BQ7Z7G8 4022 aa4.52□□□□□ -1.69
SPG11-209ENST00000558253 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
SPG11-209ENST00000558253 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
SPG11-209ENST00000558253 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SPG11-209ENST00000558253 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
SPG11-209ENST00000558253 Q5VSD8 79 aa4.47□□□□□ -1.69
SPG11-209ENST00000558253 RYR2Q92736 4967 aa4.43□□□□□ -1.7
SPG11-209ENST00000558253 COX6B2Q6YFQ2 88 aa4.43□□□□□ -1.7
SPG11-209ENST00000558253 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
SPG11-209ENST00000558253 ADM2Q7Z4H4 148 aa4.42□□□□□ -1.7
SPG11-209ENST00000558253 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
SPG11-209ENST00000558253 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
SPG11-209ENST00000558253 PKHD1P08F94 4074 aa4.4□□□□□ -1.7
SPG11-209ENST00000558253 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
SPG11-209ENST00000558253 K7ERS5 55 aa4.36□□□□□ -1.71
SPG11-209ENST00000558253 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
SPG11-209ENST00000558253 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.71
SPG11-209ENST00000558253 A0A1B0GU33 70 aa4.34□□□□□ -1.71
SPG11-209ENST00000558253 FAT1Q14517 4588 aa4.34□□□□□ -1.72
SPG11-209ENST00000558253 ROMO1P60602 79 aa4.33□□□□□ -1.72
SPG11-209ENST00000558253 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
SPG11-209ENST00000558253 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
SPG11-209ENST00000558253 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
SPG11-209ENST00000558253 S4R3F8 94 aa4.27□□□□□ -1.73
SPG11-209ENST00000558253 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
SPG11-209ENST00000558253 RYR1P21817 5038 aa4.27□□□□□ -1.73
SPG11-209ENST00000558253 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
SPG11-209ENST00000558253 H0YAA0 97 aa4.24□□□□□ -1.73
SPG11-209ENST00000558253 HSPG2P98160 4391 aa4.22□□□□□ -1.73
SPG11-209ENST00000558253 TNXBP22105 4242 aa4.22□□□□□ -1.73
SPG11-209ENST00000558253 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
SPG11-209ENST00000558253 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
SPG11-209ENST00000558253 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
SPG11-209ENST00000558253 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
SPG11-209ENST00000558253 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.74
SPG11-209ENST00000558253 RYR3Q15413 4870 aa4.15□□□□□ -1.74
SPG11-209ENST00000558253 M0QZ58 72 aa4.12□□□□□ -1.75
SPG11-209ENST00000558253 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
SPG11-209ENST00000558253 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
SPG11-209ENST00000558253 P0C880 135 aa4.08□□□□□ -1.76
SPG11-209ENST00000558253 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
SPG11-209ENST00000558253 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
SPG11-209ENST00000558253 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
SPG11-209ENST00000558253 A0A0D9SG42 100 aa4.01□□□□□ -1.77
SPG11-209ENST00000558253 EPPK1P58107 5090 aaKnown RBP3.97□□□□□ -1.77
SPG11-209ENST00000558253 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
SPG11-209ENST00000558253 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SPG11-209ENST00000558253 R4GN34 69 aa3.95□□□□□ -1.78
SPG11-209ENST00000558253 LRP2P98164 4655 aa3.93□□□□□ -1.78
SPG11-209ENST00000558253 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
SPG11-209ENST00000558253 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
SPG11-209ENST00000558253 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
SPG11-209ENST00000558253 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SPG11-209ENST00000558253 HERC2O95714 4834 aa3.88□□□□□ -1.79
SPG11-209ENST00000558253 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SPG11-209ENST00000558253 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
SPG11-209ENST00000558253 ABCA13Q86UQ4 5058 aa3.86□□□□□ -1.79
SPG11-209ENST00000558253 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
SPG11-209ENST00000558253 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SPG11-209ENST00000558253 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
SPG11-209ENST00000558253 LPAP08519 4548 aa3.82□□□□□ -1.8
SPG11-209ENST00000558253 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
SPG11-209ENST00000558253 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
SPG11-209ENST00000558253 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
SPG11-209ENST00000558253 MT3P25713 68 aa3.76□□□□□ -1.81
SPG11-209ENST00000558253 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
SPG11-209ENST00000558253 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
SPG11-209ENST00000558253 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
SPG11-209ENST00000558253 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
SPG11-209ENST00000558253 HERC1Q15751 4861 aa3.66□□□□□ -1.82
SPG11-209ENST00000558253 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
SPG11-209ENST00000558253 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
SPG11-209ENST00000558253 TNP1P09430 55 aa3.64□□□□□ -1.83
SPG11-209ENST00000558253 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
SPG11-209ENST00000558253 M0R2T5 61 aa3.63□□□□□ -1.83
SPG11-209ENST00000558253 MT1HP80294 61 aa3.61□□□□□ -1.83
SPG11-209ENST00000558253 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
SPG11-209ENST00000558253 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
SPG11-209ENST00000558253 MT2AP02795 61 aa3.53□□□□□ -1.84
SPG11-209ENST00000558253 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
SPG11-209ENST00000558253 MT1FP04733 61 aa3.5□□□□□ -1.85
SPG11-209ENST00000558253 MUC2Q02817 5179 aa3.48□□□□□ -1.85
SPG11-209ENST00000558253 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
SPG11-209ENST00000558253 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms