RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 FBN1P35555 2871 aaKnown RBP1.74□□□□□ -2.13
ATXN3-248ENST00000558190 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
ATXN3-248ENST00000558190 CUBNO60494 3623 aa1.73□□□□□ -2.13
ATXN3-248ENST00000558190 DNHD1Q96M86 4753 aa1.73□□□□□ -2.13
ATXN3-248ENST00000558190 BIRC6Q9NR09 4857 aa1.72□□□□□ -2.13
ATXN3-248ENST00000558190 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
ATXN3-248ENST00000558190 KRTAP3-3Q9BYR6 98 aa1.72□□□□□ -2.13
ATXN3-248ENST00000558190 HRNRQ86YZ3 2850 aaPredicted RBP1.71□□□□□ -2.14
ATXN3-248ENST00000558190 SVEP1Q4LDE5 3571 aa1.71□□□□□ -2.14
ATXN3-248ENST00000558190 OTOGQ6ZRI0 2925 aa1.7□□□□□ -2.14
ATXN3-248ENST00000558190 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
ATXN3-248ENST00000558190 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
ATXN3-248ENST00000558190 ZNF469Q96JG9 3925 aaPredicted RBP1.68□□□□□ -2.14
ATXN3-248ENST00000558190 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
ATXN3-248ENST00000558190 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
ATXN3-248ENST00000558190 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
ATXN3-248ENST00000558190 HYDINQ4G0P3 5121 aa1.67□□□□□ -2.14
ATXN3-248ENST00000558190 DYNC2H1Q8NCM8 4307 aaKnown RBP1.67□□□□□ -2.14
ATXN3-248ENST00000558190 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
ATXN3-248ENST00000558190 CSMD2Q7Z408 3487 aa1.67□□□□□ -2.14
ATXN3-248ENST00000558190 DYNC1H1Q14204 4646 aaKnown RBP1.66□□□□□ -2.14
ATXN3-248ENST00000558190 APOBP04114 4563 aaKnown RBP1.65□□□□□ -2.14
ATXN3-248ENST00000558190 PKHD1P08F94 4074 aa1.65□□□□□ -2.15
ATXN3-248ENST00000558190 CSMD3Q7Z407 3707 aa1.65□□□□□ -2.15
ATXN3-248ENST00000558190 KRTAP23-1A1A580 65 aa1.65□□□□□ -2.15
ATXN3-248ENST00000558190 RYR1P21817 5038 aa1.64□□□□□ -2.15
ATXN3-248ENST00000558190 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
ATXN3-248ENST00000558190 PKHD1L1Q86WI1 4243 aa1.63□□□□□ -2.15
ATXN3-248ENST00000558190 RYR2Q92736 4967 aa1.62□□□□□ -2.15
ATXN3-248ENST00000558190 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
ATXN3-248ENST00000558190 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
ATXN3-248ENST00000558190 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
ATXN3-248ENST00000558190 MYCBP2O75592 4640 aa1.61□□□□□ -2.15
ATXN3-248ENST00000558190 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
ATXN3-248ENST00000558190 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
ATXN3-248ENST00000558190 KRTAP10-5P60370 271 aa1.6□□□□□ -2.15
ATXN3-248ENST00000558190 LORP23490 312 aaPredicted RBP1.6□□□□□ -2.15
ATXN3-248ENST00000558190 RYR3Q15413 4870 aa1.59□□□□□ -2.16
ATXN3-248ENST00000558190 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
ATXN3-248ENST00000558190 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
ATXN3-248ENST00000558190 LRP2P98164 4655 aa1.57□□□□□ -2.16
ATXN3-248ENST00000558190 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
ATXN3-248ENST00000558190 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
ATXN3-248ENST00000558190 EPPK1P58107 5090 aaKnown RBP1.55□□□□□ -2.16
ATXN3-248ENST00000558190 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
ATXN3-248ENST00000558190 LCE3AQ5TA76 89 aa1.54□□□□□ -2.16
ATXN3-248ENST00000558190 ABCA13Q86UQ4 5058 aa1.53□□□□□ -2.16
ATXN3-248ENST00000558190 FSIP2Q5CZC0 6907 aa1.52□□□□□ -2.17
ATXN3-248ENST00000558190 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
ATXN3-248ENST00000558190 PKD1P98161 4303 aa1.52□□□□□ -2.17
ATXN3-248ENST00000558190 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
ATXN3-248ENST00000558190 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
ATXN3-248ENST00000558190 FAT1Q14517 4588 aa1.51□□□□□ -2.17
ATXN3-248ENST00000558190 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
ATXN3-248ENST00000558190 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
ATXN3-248ENST00000558190 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
ATXN3-248ENST00000558190 MT1HL1P0DM35 61 aa1.48□□□□□ -2.17
ATXN3-248ENST00000558190 MUC12Q9UKN1 5478 aa1.48□□□□□ -2.17
ATXN3-248ENST00000558190 NEBP20929 6669 aa1.48□□□□□ -2.17
ATXN3-248ENST00000558190 LCE3CQ5T5A8 94 aa1.46□□□□□ -2.18
ATXN3-248ENST00000558190 TNXBP22105 4242 aa1.46□□□□□ -2.18
ATXN3-248ENST00000558190 HSPG2P98160 4391 aa1.46□□□□□ -2.18
ATXN3-248ENST00000558190 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
ATXN3-248ENST00000558190 HERC1Q15751 4861 aa1.46□□□□□ -2.18
ATXN3-248ENST00000558190 MT3P25713 68 aa1.46□□□□□ -2.18
ATXN3-248ENST00000558190 KRTAP10-12P60413 245 aa1.45□□□□□ -2.18
ATXN3-248ENST00000558190 KRTAP4-5Q9BYR2 181 aa1.44□□□□□ -2.18
ATXN3-248ENST00000558190 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
ATXN3-248ENST00000558190 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
ATXN3-248ENST00000558190 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
ATXN3-248ENST00000558190 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
ATXN3-248ENST00000558190 HERC2O95714 4834 aa1.41□□□□□ -2.18
ATXN3-248ENST00000558190 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
ATXN3-248ENST00000558190 KMT2CQ8NEZ4 4911 aaKnown RBP1.38□□□□□ -2.19
ATXN3-248ENST00000558190 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
ATXN3-248ENST00000558190 KIAA1109Q2LD37 5005 aa1.34□□□□□ -2.19
ATXN3-248ENST00000558190 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
ATXN3-248ENST00000558190 SPRR2GQ9BYE4 73 aa1.33□□□□□ -2.2
ATXN3-248ENST00000558190 LPAP08519 4548 aa1.33□□□□□ -2.2
ATXN3-248ENST00000558190 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
ATXN3-248ENST00000558190 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
ATXN3-248ENST00000558190 KRTAP10-7P60409 375 aaPredicted RBP1.31□□□□□ -2.2
ATXN3-248ENST00000558190 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
ATXN3-248ENST00000558190 MT2AP02795 61 aa1.29□□□□□ -2.2
ATXN3-248ENST00000558190 FAT4Q6V0I7 4981 aa1.28□□□□□ -2.2
ATXN3-248ENST00000558190 KRTAP17-1Q9BYP8 105 aa1.27□□□□□ -2.21
ATXN3-248ENST00000558190 LCE3EQ5T5B0 92 aa1.27□□□□□ -2.21
ATXN3-248ENST00000558190 KRTAP4-7Q9BYR0 210 aa1.27□□□□□ -2.21
ATXN3-248ENST00000558190 KRTAP4-8A0A0G2JLE6 195 aa1.26□□□□□ -2.21
ATXN3-248ENST00000558190 LCE3DQ9BYE3 92 aa1.26□□□□□ -2.21
ATXN3-248ENST00000558190 KRTAP4-8Q9BYQ9 185 aa1.26□□□□□ -2.21
ATXN3-248ENST00000558190 MT1FP04733 61 aa1.26□□□□□ -2.21
ATXN3-248ENST00000558190 KRTAP19-1Q8IUB9 90 aa1.26□□□□□ -2.21
ATXN3-248ENST00000558190 MT1GP13640 62 aa1.25□□□□□ -2.21
ATXN3-248ENST00000558190 MT1HP80294 61 aa1.25□□□□□ -2.21
ATXN3-248ENST00000558190 MUC2Q02817 5179 aa1.24□□□□□ -2.21
ATXN3-248ENST00000558190 KMT2DO14686 5537 aa1.24□□□□□ -2.21
ATXN3-248ENST00000558190 MT1XP80297 61 aa1.24□□□□□ -2.21
ATXN3-248ENST00000558190 USH2AO75445 5202 aa1.23□□□□□ -2.21
ATXN3-248ENST00000558190 LCE3BQ5TA77 95 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms