RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 SMIM20Q8N5G0 67 aa2.1□□□□□ -2.07
TRAV15-201ENST00000556680 R4GN34 69 aa2.1□□□□□ -2.07
TRAV15-201ENST00000556680 TRAV7A0A075B6U4 112 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 COX7CP15954 63 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 RPS29P62273 56 aaKnown RBP2.09□□□□□ -2.07
TRAV15-201ENST00000556680 SERP2Q8N6R1 65 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 RYR3Q15413 4870 aa2.09□□□□□ -2.07
TRAV15-201ENST00000556680 H0Y9P7 68 aa2.08□□□□□ -2.08
TRAV15-201ENST00000556680 CCDC179H3BU77 68 aa2.08□□□□□ -2.08
TRAV15-201ENST00000556680 P0C880 135 aa2.08□□□□□ -2.08
TRAV15-201ENST00000556680 Q5XG85 94 aa2.08□□□□□ -2.08
TRAV15-201ENST00000556680 MRPL34Q9BQ48 92 aaKnown RBP2.08□□□□□ -2.08
TRAV15-201ENST00000556680 A6NED7 52 aa2.07□□□□□ -2.08
TRAV15-201ENST00000556680 UQCRQO14949 82 aa2.07□□□□□ -2.08
TRAV15-201ENST00000556680 C20orf197Q8N268 126 aa2.07□□□□□ -2.08
TRAV15-201ENST00000556680 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
TRAV15-201ENST00000556680 HSPG2P98160 4391 aa2.07□□□□□ -2.08
TRAV15-201ENST00000556680 RYR1P21817 5038 aa2.06□□□□□ -2.08
TRAV15-201ENST00000556680 TRAV22A0A0B4J277 110 aa2.05□□□□□ -2.08
TRAV15-201ENST00000556680 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
TRAV15-201ENST00000556680 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
TRAV15-201ENST00000556680 TP53AIP1Q9HCN2 124 aa2.05□□□□□ -2.08
TRAV15-201ENST00000556680 FLG2Q5D862 2391 aaPredicted RBP2.05□□□□□ -2.08
TRAV15-201ENST00000556680 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
TRAV15-201ENST00000556680 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
TRAV15-201ENST00000556680 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
TRAV15-201ENST00000556680 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
TRAV15-201ENST00000556680 FAM236DA0A1B0GTK5 79 aa2.03□□□□□ -2.08
TRAV15-201ENST00000556680 FAM236CP0DP71 79 aa2.03□□□□□ -2.08
TRAV15-201ENST00000556680 PCOTHQ58A44 107 aa2.03□□□□□ -2.08
TRAV15-201ENST00000556680 FP248Q71RG6 208 aaPredicted RBP2.03□□□□□ -2.08
TRAV15-201ENST00000556680 TNXBP22105 4242 aa2.03□□□□□ -2.08
TRAV15-201ENST00000556680 FAT1Q14517 4588 aa2.02□□□□□ -2.09
TRAV15-201ENST00000556680 H3BPC8 53 aa2.02□□□□□ -2.09
TRAV15-201ENST00000556680 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
TRAV15-201ENST00000556680 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
TRAV15-201ENST00000556680 NDUFC1O43677 76 aa2.01□□□□□ -2.09
TRAV15-201ENST00000556680 KLKP1Q107X0 134 aa2.01□□□□□ -2.09
TRAV15-201ENST00000556680 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
TRAV15-201ENST00000556680 CYSTM1Q9H1C7 97 aa2.01□□□□□ -2.09
TRAV15-201ENST00000556680 KIAA1109Q2LD37 5005 aa2□□□□□ -2.09
TRAV15-201ENST00000556680 TMEM258P61165 79 aa2□□□□□ -2.09
TRAV15-201ENST00000556680 ATP11AUNQ6ZP68 121 aa2□□□□□ -2.09
TRAV15-201ENST00000556680 H7BZZ5 65 aa1.99□□□□□ -2.09
TRAV15-201ENST00000556680 ATP5EP56381 51 aaPredicted RBP1.99□□□□□ -2.09
TRAV15-201ENST00000556680 C7orf65Q6ZTY9 151 aa1.99□□□□□ -2.09
TRAV15-201ENST00000556680 C20orf166-AS1Q96NR2 134 aa1.99□□□□□ -2.09
TRAV15-201ENST00000556680 DMBT1Q9UGM3 2413 aaPredicted RBP1.99□□□□□ -2.09
TRAV15-201ENST00000556680 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
TRAV15-201ENST00000556680 A0A1B0GU33 70 aa1.98□□□□□ -2.09
TRAV15-201ENST00000556680 A8MUN3 132 aa1.98□□□□□ -2.09
TRAV15-201ENST00000556680 RPL37P61927 97 aaKnown RBP1.98□□□□□ -2.09
TRAV15-201ENST00000556680 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
TRAV15-201ENST00000556680 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
TRAV15-201ENST00000556680 CYP4F30PQ9H0H9 118 aa1.97□□□□□ -2.09
TRAV15-201ENST00000556680 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
TRAV15-201ENST00000556680 CHKB-CPT1BH3BT56 60 aa1.95□□□□□ -2.1
TRAV15-201ENST00000556680 SPINK7P58062 85 aa1.95□□□□□ -2.1
TRAV15-201ENST00000556680 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
TRAV15-201ENST00000556680 SERP1Q9Y6X1 66 aa1.94□□□□□ -2.1
TRAV15-201ENST00000556680 ACYP2P14621 99 aa1.93□□□□□ -2.1
TRAV15-201ENST00000556680 COA5Q86WW8 74 aa1.93□□□□□ -2.1
TRAV15-201ENST00000556680 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
TRAV15-201ENST00000556680 HERC2O95714 4834 aa1.93□□□□□ -2.1
TRAV15-201ENST00000556680 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
TRAV15-201ENST00000556680 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
TRAV15-201ENST00000556680 LCA10Q71F78 164 aa1.92□□□□□ -2.1
TRAV15-201ENST00000556680 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
TRAV15-201ENST00000556680 COX6B2Q6YFQ2 88 aa1.9□□□□□ -2.11
TRAV15-201ENST00000556680 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
TRAV15-201ENST00000556680 DMAC1Q96GE9 116 aa1.9□□□□□ -2.11
TRAV15-201ENST00000556680 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
TRAV15-201ENST00000556680 S4R3F8 94 aa1.89□□□□□ -2.11
TRAV15-201ENST00000556680 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
TRAV15-201ENST00000556680 LPAP08519 4548 aa1.88□□□□□ -2.11
TRAV15-201ENST00000556680 PCLOQ9Y6V0 5065 aa1.88□□□□□ -2.11
TRAV15-201ENST00000556680 H1FX-AS1Q4G0G2 97 aa1.86□□□□□ -2.11
TRAV15-201ENST00000556680 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
TRAV15-201ENST00000556680 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
TRAV15-201ENST00000556680 MUC17Q685J3 4493 aa1.84□□□□□ -2.11
TRAV15-201ENST00000556680 A0A1B0GU69 56 aa1.84□□□□□ -2.11
TRAV15-201ENST00000556680 Q1T7F1 81 aa1.83□□□□□ -2.12
TRAV15-201ENST00000556680 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
TRAV15-201ENST00000556680 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
TRAV15-201ENST00000556680 LRP2P98164 4655 aa1.81□□□□□ -2.12
TRAV15-201ENST00000556680 M0R2T5 61 aa1.81□□□□□ -2.12
TRAV15-201ENST00000556680 CSAG1Q6PB30 78 aa1.81□□□□□ -2.12
TRAV15-201ENST00000556680 HERC1Q15751 4861 aa1.8□□□□□ -2.12
TRAV15-201ENST00000556680 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
TRAV15-201ENST00000556680 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
TRAV15-201ENST00000556680 Q5VV11 94 aa1.79□□□□□ -2.12
TRAV15-201ENST00000556680 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
TRAV15-201ENST00000556680 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
TRAV15-201ENST00000556680 UQCR11O14957 56 aa1.77□□□□□ -2.13
TRAV15-201ENST00000556680 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
TRAV15-201ENST00000556680 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
TRAV15-201ENST00000556680 HMCN2Q8NDA2 5059 aa1.76□□□□□ -2.13
TRAV15-201ENST00000556680 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms