RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.16
PTPN21-208ENST00000556564 DNHD1Q96M86 4753 aa7.83□□□□□ -1.16
PTPN21-208ENST00000556564 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
PTPN21-208ENST00000556564 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
PTPN21-208ENST00000556564 CMYA5Q8N3K9 4069 aa7.78□□□□□ -1.16
PTPN21-208ENST00000556564 STARD9Q9P2P6 4700 aa7.77□□□□□ -1.17
PTPN21-208ENST00000556564 DNAH11Q96DT5 4516 aa7.77□□□□□ -1.17
PTPN21-208ENST00000556564 DNAH17Q9UFH2 4485 aa7.77□□□□□ -1.17
PTPN21-208ENST00000556564 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
PTPN21-208ENST00000556564 PRKDCP78527 4128 aaKnown RBP7.74□□□□□ -1.17
PTPN21-208ENST00000556564 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
PTPN21-208ENST00000556564 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
PTPN21-208ENST00000556564 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
PTPN21-208ENST00000556564 LRP1BQ9NZR2 4599 aa7.66□□□□□ -1.18
PTPN21-208ENST00000556564 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
PTPN21-208ENST00000556564 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
PTPN21-208ENST00000556564 DYNC2H1Q8NCM8 4307 aaKnown RBP7.62□□□□□ -1.19
PTPN21-208ENST00000556564 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
PTPN21-208ENST00000556564 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.2
PTPN21-208ENST00000556564 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
PTPN21-208ENST00000556564 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
PTPN21-208ENST00000556564 DNAH6Q9C0G6 4158 aa7.5□□□□□ -1.21
PTPN21-208ENST00000556564 MT1HP80294 61 aa7.48□□□□□ -1.21
PTPN21-208ENST00000556564 FAT1Q14517 4588 aa7.45□□□□□ -1.22
PTPN21-208ENST00000556564 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
PTPN21-208ENST00000556564 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
PTPN21-208ENST00000556564 DNAH7Q8WXX0 4024 aa7.35□□□□□ -1.23
PTPN21-208ENST00000556564 DNAH8Q96JB1 4490 aa7.34□□□□□ -1.24
PTPN21-208ENST00000556564 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
PTPN21-208ENST00000556564 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
PTPN21-208ENST00000556564 RYR1P21817 5038 aa7.3□□□□□ -1.24
PTPN21-208ENST00000556564 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
PTPN21-208ENST00000556564 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.24
PTPN21-208ENST00000556564 FRAS1Q86XX4 4008 aa7.27□□□□□ -1.25
PTPN21-208ENST00000556564 LYSTQ99698 3801 aa7.27□□□□□ -1.25
PTPN21-208ENST00000556564 MT2AP02795 61 aa7.24□□□□□ -1.25
PTPN21-208ENST00000556564 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
PTPN21-208ENST00000556564 MT1FP04733 61 aa7.13□□□□□ -1.27
PTPN21-208ENST00000556564 APOBP04114 4563 aaKnown RBP7.12□□□□□ -1.27
PTPN21-208ENST00000556564 RYR3Q15413 4870 aa7.11□□□□□ -1.27
PTPN21-208ENST00000556564 HSPG2P98160 4391 aa7.01□□□□□ -1.29
PTPN21-208ENST00000556564 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
PTPN21-208ENST00000556564 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
PTPN21-208ENST00000556564 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
PTPN21-208ENST00000556564 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
PTPN21-208ENST00000556564 RYR2Q92736 4967 aa6.95□□□□□ -1.3
PTPN21-208ENST00000556564 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
PTPN21-208ENST00000556564 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
PTPN21-208ENST00000556564 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
PTPN21-208ENST00000556564 PKHD1P08F94 4074 aa6.8□□□□□ -1.32
PTPN21-208ENST00000556564 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
PTPN21-208ENST00000556564 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
PTPN21-208ENST00000556564 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
PTPN21-208ENST00000556564 PKD1P98161 4303 aa6.74□□□□□ -1.33
PTPN21-208ENST00000556564 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
PTPN21-208ENST00000556564 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
PTPN21-208ENST00000556564 LPAP08519 4548 aa6.66□□□□□ -1.34
PTPN21-208ENST00000556564 HERC2O95714 4834 aa6.63□□□□□ -1.35
PTPN21-208ENST00000556564 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
PTPN21-208ENST00000556564 INE1O15225 51 aa6.59□□□□□ -1.36
PTPN21-208ENST00000556564 TNXBP22105 4242 aa6.58□□□□□ -1.36
PTPN21-208ENST00000556564 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
PTPN21-208ENST00000556564 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
PTPN21-208ENST00000556564 SPRR2EP22531 72 aa6.55□□□□□ -1.36
PTPN21-208ENST00000556564 SPRR2BP35325 72 aa6.55□□□□□ -1.36
PTPN21-208ENST00000556564 SPRR2AP35326 72 aa6.55□□□□□ -1.36
PTPN21-208ENST00000556564 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
PTPN21-208ENST00000556564 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
PTPN21-208ENST00000556564 HERC1Q15751 4861 aa6.47□□□□□ -1.37
PTPN21-208ENST00000556564 MT1BP07438 61 aa6.43□□□□□ -1.38
PTPN21-208ENST00000556564 MT1XP80297 61 aa6.43□□□□□ -1.38
PTPN21-208ENST00000556564 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
PTPN21-208ENST00000556564 KMT2CQ8NEZ4 4911 aaKnown RBP6.41□□□□□ -1.38
PTPN21-208ENST00000556564 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
PTPN21-208ENST00000556564 LRP2P98164 4655 aa6.4□□□□□ -1.38
PTPN21-208ENST00000556564 SPRR2DP22532 72 aa6.33□□□□□ -1.4
PTPN21-208ENST00000556564 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
PTPN21-208ENST00000556564 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
PTPN21-208ENST00000556564 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
PTPN21-208ENST00000556564 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
PTPN21-208ENST00000556564 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
PTPN21-208ENST00000556564 LCE2BO14633 110 aa6.22□□□□□ -1.41
PTPN21-208ENST00000556564 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
PTPN21-208ENST00000556564 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
PTPN21-208ENST00000556564 MT1GP13640 62 aa6.13□□□□□ -1.43
PTPN21-208ENST00000556564 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
PTPN21-208ENST00000556564 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
PTPN21-208ENST00000556564 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
PTPN21-208ENST00000556564 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
PTPN21-208ENST00000556564 KRTAP12-4P60329 112 aa5.9□□□□□ -1.47
PTPN21-208ENST00000556564 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
PTPN21-208ENST00000556564 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
PTPN21-208ENST00000556564 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
PTPN21-208ENST00000556564 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
PTPN21-208ENST00000556564 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
PTPN21-208ENST00000556564 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
PTPN21-208ENST00000556564 MT1EP04732 61 aa5.77□□□□□ -1.49
PTPN21-208ENST00000556564 MT1LQ93083 61 aa5.76□□□□□ -1.49
PTPN21-208ENST00000556564 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
PTPN21-208ENST00000556564 MT4P47944 62 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms