RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 KRTAP10-1P60331 282 aa5.68□□□□□ -1.5
SRSF5-212ENST00000556184 PKD1P98161 4303 aa5.67□□□□□ -1.5
SRSF5-212ENST00000556184 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
SRSF5-212ENST00000556184 P0C880 135 aa5.6□□□□□ -1.51
SRSF5-212ENST00000556184 VPS13BQ7Z7G8 4022 aa5.59□□□□□ -1.51
SRSF5-212ENST00000556184 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
SRSF5-212ENST00000556184 KIAA1109Q2LD37 5005 aa5.56□□□□□ -1.52
SRSF5-212ENST00000556184 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
SRSF5-212ENST00000556184 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SRSF5-212ENST00000556184 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
SRSF5-212ENST00000556184 SMR3BP02814 79 aaPredicted RBP5.52□□□□□ -1.53
SRSF5-212ENST00000556184 CRIPTQ9P021 101 aa5.52□□□□□ -1.53
SRSF5-212ENST00000556184 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
SRSF5-212ENST00000556184 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
SRSF5-212ENST00000556184 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
SRSF5-212ENST00000556184 XP32Q5T750 250 aa5.48□□□□□ -1.53
SRSF5-212ENST00000556184 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
SRSF5-212ENST00000556184 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
SRSF5-212ENST00000556184 FAT1Q14517 4588 aa5.46□□□□□ -1.53
SRSF5-212ENST00000556184 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
SRSF5-212ENST00000556184 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
SRSF5-212ENST00000556184 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
SRSF5-212ENST00000556184 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
SRSF5-212ENST00000556184 KRTAP17-1Q9BYP8 105 aa5.44□□□□□ -1.54
SRSF5-212ENST00000556184 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
SRSF5-212ENST00000556184 HSPG2P98160 4391 aa5.43□□□□□ -1.54
SRSF5-212ENST00000556184 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SRSF5-212ENST00000556184 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
SRSF5-212ENST00000556184 RYR1P21817 5038 aa5.39□□□□□ -1.55
SRSF5-212ENST00000556184 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
SRSF5-212ENST00000556184 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
SRSF5-212ENST00000556184 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
SRSF5-212ENST00000556184 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
SRSF5-212ENST00000556184 S4R3F8 94 aa5.37□□□□□ -1.55
SRSF5-212ENST00000556184 A0A0D9SG42 100 aa5.36□□□□□ -1.55
SRSF5-212ENST00000556184 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
SRSF5-212ENST00000556184 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
SRSF5-212ENST00000556184 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SRSF5-212ENST00000556184 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
SRSF5-212ENST00000556184 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SRSF5-212ENST00000556184 HERC2O95714 4834 aa5.33□□□□□ -1.56
SRSF5-212ENST00000556184 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
SRSF5-212ENST00000556184 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
SRSF5-212ENST00000556184 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
SRSF5-212ENST00000556184 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
SRSF5-212ENST00000556184 Q5VSD8 79 aa5.3□□□□□ -1.56
SRSF5-212ENST00000556184 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
SRSF5-212ENST00000556184 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
SRSF5-212ENST00000556184 M0QZ58 72 aa5.27□□□□□ -1.57
SRSF5-212ENST00000556184 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
SRSF5-212ENST00000556184 FAT3Q8TDW7 4589 aa5.21□□□□□ -1.58
SRSF5-212ENST00000556184 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
SRSF5-212ENST00000556184 HERC1Q15751 4861 aa5.17□□□□□ -1.58
SRSF5-212ENST00000556184 DMBT1Q9UGM3 2413 aaPredicted RBP5.16□□□□□ -1.58
SRSF5-212ENST00000556184 TNXBP22105 4242 aa5.16□□□□□ -1.58
SRSF5-212ENST00000556184 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
SRSF5-212ENST00000556184 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
SRSF5-212ENST00000556184 LPAP08519 4548 aa5□□□□□ -1.61
SRSF5-212ENST00000556184 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
SRSF5-212ENST00000556184 R4GN34 69 aa4.97□□□□□ -1.61
SRSF5-212ENST00000556184 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
SRSF5-212ENST00000556184 LRP2P98164 4655 aa4.94□□□□□ -1.62
SRSF5-212ENST00000556184 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
SRSF5-212ENST00000556184 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
SRSF5-212ENST00000556184 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
SRSF5-212ENST00000556184 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
SRSF5-212ENST00000556184 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.62
SRSF5-212ENST00000556184 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
SRSF5-212ENST00000556184 MUC2Q02817 5179 aa4.88□□□□□ -1.63
SRSF5-212ENST00000556184 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
SRSF5-212ENST00000556184 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SRSF5-212ENST00000556184 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
SRSF5-212ENST00000556184 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
SRSF5-212ENST00000556184 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
SRSF5-212ENST00000556184 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
SRSF5-212ENST00000556184 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
SRSF5-212ENST00000556184 TNP1P09430 55 aa4.66□□□□□ -1.66
SRSF5-212ENST00000556184 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
SRSF5-212ENST00000556184 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
SRSF5-212ENST00000556184 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
SRSF5-212ENST00000556184 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
SRSF5-212ENST00000556184 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
SRSF5-212ENST00000556184 INE1O15225 51 aa4.44□□□□□ -1.7
SRSF5-212ENST00000556184 FLGP20930 4061 aaPredicted RBP4.42□□□□□ -1.7
SRSF5-212ENST00000556184 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
SRSF5-212ENST00000556184 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SRSF5-212ENST00000556184 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
SRSF5-212ENST00000556184 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
SRSF5-212ENST00000556184 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
SRSF5-212ENST00000556184 M0R2T5 61 aa4.29□□□□□ -1.72
SRSF5-212ENST00000556184 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
SRSF5-212ENST00000556184 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SRSF5-212ENST00000556184 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
SRSF5-212ENST00000556184 MT1HP80294 61 aa4.26□□□□□ -1.73
SRSF5-212ENST00000556184 MT3P25713 68 aa4.25□□□□□ -1.73
SRSF5-212ENST00000556184 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
SRSF5-212ENST00000556184 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
SRSF5-212ENST00000556184 USH2AO75445 5202 aa4.15□□□□□ -1.75
SRSF5-212ENST00000556184 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
SRSF5-212ENST00000556184 MT1FP04733 61 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms