RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
SRSF5-212ENST00000556184 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
SRSF5-212ENST00000556184 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
SRSF5-212ENST00000556184 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
SRSF5-212ENST00000556184 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.66
SRSF5-212ENST00000556184 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
SRSF5-212ENST00000556184 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
SRSF5-212ENST00000556184 KCNA4P22459 653 aa18.27■□□□□ 0.51
SRSF5-212ENST00000556184 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
SRSF5-212ENST00000556184 ADRA2BP18089 450 aa17.81■□□□□ 0.44
SRSF5-212ENST00000556184 HRCP23327 699 aa17.8■□□□□ 0.44
SRSF5-212ENST00000556184 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
SRSF5-212ENST00000556184 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
SRSF5-212ENST00000556184 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
SRSF5-212ENST00000556184 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
SRSF5-212ENST00000556184 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
SRSF5-212ENST00000556184 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.37
SRSF5-212ENST00000556184 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
SRSF5-212ENST00000556184 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
SRSF5-212ENST00000556184 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
SRSF5-212ENST00000556184 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
SRSF5-212ENST00000556184 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
SRSF5-212ENST00000556184 ABCC9O60706 1549 aa17.22■□□□□ 0.35
SRSF5-212ENST00000556184 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
SRSF5-212ENST00000556184 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
SRSF5-212ENST00000556184 PPARGC1BQ86YN6 1023 aaKnown RBP17.1■□□□□ 0.33
SRSF5-212ENST00000556184 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
SRSF5-212ENST00000556184 ZBTB22O15209 634 aa17.02■□□□□ 0.32
SRSF5-212ENST00000556184 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
SRSF5-212ENST00000556184 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
SRSF5-212ENST00000556184 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
SRSF5-212ENST00000556184 MYT1Q01538 1121 aa16.64■□□□□ 0.25
SRSF5-212ENST00000556184 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
SRSF5-212ENST00000556184 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
SRSF5-212ENST00000556184 PRKCSHP14314 528 aaPredicted RBP16.53■□□□□ 0.24
SRSF5-212ENST00000556184 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
SRSF5-212ENST00000556184 ACIN1Q9UKV3 1341 aaKnown RBP16.39■□□□□ 0.21
SRSF5-212ENST00000556184 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
SRSF5-212ENST00000556184 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
SRSF5-212ENST00000556184 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
SRSF5-212ENST00000556184 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
SRSF5-212ENST00000556184 NACADO15069 1562 aa16.29■□□□□ 0.2
SRSF5-212ENST00000556184 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
SRSF5-212ENST00000556184 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
SRSF5-212ENST00000556184 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
SRSF5-212ENST00000556184 FOXD1Q16676 465 aa16.24■□□□□ 0.19
SRSF5-212ENST00000556184 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
SRSF5-212ENST00000556184 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
SRSF5-212ENST00000556184 FKBP8Q14318 412 aa16.11■□□□□ 0.17
SRSF5-212ENST00000556184 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
SRSF5-212ENST00000556184 CCER1Q8TC90 406 aaPredicted RBP16.08■□□□□ 0.17
SRSF5-212ENST00000556184 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-212ENST00000556184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
SRSF5-212ENST00000556184 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
SRSF5-212ENST00000556184 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
SRSF5-212ENST00000556184 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
SRSF5-212ENST00000556184 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
SRSF5-212ENST00000556184 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-212ENST00000556184 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
SRSF5-212ENST00000556184 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
SRSF5-212ENST00000556184 PLCB2Q00722 1185 aa15.87■□□□□ 0.13
SRSF5-212ENST00000556184 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
SRSF5-212ENST00000556184 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
SRSF5-212ENST00000556184 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
SRSF5-212ENST00000556184 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
SRSF5-212ENST00000556184 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
SRSF5-212ENST00000556184 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
SRSF5-212ENST00000556184 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
SRSF5-212ENST00000556184 EEA1Q15075 1411 aa15.74■□□□□ 0.11
SRSF5-212ENST00000556184 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
SRSF5-212ENST00000556184 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
SRSF5-212ENST00000556184 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-212ENST00000556184 WIZO95785 1651 aa15.7■□□□□ 0.1
SRSF5-212ENST00000556184 BCANQ96GW7 911 aa15.68■□□□□ 0.1
SRSF5-212ENST00000556184 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
SRSF5-212ENST00000556184 MIER1Q8N108 512 aa15.66■□□□□ 0.1
SRSF5-212ENST00000556184 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
SRSF5-212ENST00000556184 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
SRSF5-212ENST00000556184 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SRSF5-212ENST00000556184 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
SRSF5-212ENST00000556184 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
SRSF5-212ENST00000556184 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
SRSF5-212ENST00000556184 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
SRSF5-212ENST00000556184 SOGA1O94964 1423 aa15.51■□□□□ 0.07
SRSF5-212ENST00000556184 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
SRSF5-212ENST00000556184 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
SRSF5-212ENST00000556184 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
SRSF5-212ENST00000556184 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
SRSF5-212ENST00000556184 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
SRSF5-212ENST00000556184 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
SRSF5-212ENST00000556184 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
SRSF5-212ENST00000556184 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
SRSF5-212ENST00000556184 ANP32EQ9BTT0 268 aa15.4■□□□□ 0.06
SRSF5-212ENST00000556184 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
SRSF5-212ENST00000556184 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
SRSF5-212ENST00000556184 KIF21BO75037 1637 aa15.39■□□□□ 0.05
SRSF5-212ENST00000556184 FBLN2P98095 1184 aa15.37■□□□□ 0.05
SRSF5-212ENST00000556184 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
SRSF5-212ENST00000556184 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
SRSF5-212ENST00000556184 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms