RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
HNRNPC-223ENST00000556142 Q75L30 129 aa5.1□□□□□ -1.59
HNRNPC-223ENST00000556142 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
HNRNPC-223ENST00000556142 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
HNRNPC-223ENST00000556142 PRR4Q16378 134 aa5.07□□□□□ -1.6
HNRNPC-223ENST00000556142 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
HNRNPC-223ENST00000556142 HRES1P13985 223 aa5.05□□□□□ -1.6
HNRNPC-223ENST00000556142 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
HNRNPC-223ENST00000556142 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
HNRNPC-223ENST00000556142 RPL37P61927 97 aaKnown RBP5.04□□□□□ -1.6
HNRNPC-223ENST00000556142 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
HNRNPC-223ENST00000556142 MUC2Q02817 5179 aa5.01□□□□□ -1.61
HNRNPC-223ENST00000556142 LPAP08519 4548 aa5.01□□□□□ -1.61
HNRNPC-223ENST00000556142 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
HNRNPC-223ENST00000556142 C7orf65Q6ZTY9 151 aa5.01□□□□□ -1.61
HNRNPC-223ENST00000556142 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
HNRNPC-223ENST00000556142 SPINK7P58062 85 aa4.98□□□□□ -1.61
HNRNPC-223ENST00000556142 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
HNRNPC-223ENST00000556142 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
HNRNPC-223ENST00000556142 COA5Q86WW8 74 aa4.96□□□□□ -1.62
HNRNPC-223ENST00000556142 ACYP2P14621 99 aa4.94□□□□□ -1.62
HNRNPC-223ENST00000556142 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
HNRNPC-223ENST00000556142 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
HNRNPC-223ENST00000556142 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
HNRNPC-223ENST00000556142 A8MUN3 132 aa4.89□□□□□ -1.63
HNRNPC-223ENST00000556142 Q1T7F1 81 aa4.87□□□□□ -1.63
HNRNPC-223ENST00000556142 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
HNRNPC-223ENST00000556142 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
HNRNPC-223ENST00000556142 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
HNRNPC-223ENST00000556142 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
HNRNPC-223ENST00000556142 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
HNRNPC-223ENST00000556142 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
HNRNPC-223ENST00000556142 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
HNRNPC-223ENST00000556142 V9GYY9 64 aa4.81□□□□□ -1.64
HNRNPC-223ENST00000556142 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
HNRNPC-223ENST00000556142 Q5VV11 94 aa4.75□□□□□ -1.65
HNRNPC-223ENST00000556142 PSPHP1O15172 72 aa4.74□□□□□ -1.65
HNRNPC-223ENST00000556142 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
HNRNPC-223ENST00000556142 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
HNRNPC-223ENST00000556142 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
HNRNPC-223ENST00000556142 RBM12B-AS1Q9P1G2 102 aa4.71□□□□□ -1.66
HNRNPC-223ENST00000556142 LCA10Q71F78 164 aa4.7□□□□□ -1.66
HNRNPC-223ENST00000556142 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
HNRNPC-223ENST00000556142 S4R3F8 94 aa4.69□□□□□ -1.66
HNRNPC-223ENST00000556142 A0A1B0GU69 56 aa4.65□□□□□ -1.66
HNRNPC-223ENST00000556142 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
HNRNPC-223ENST00000556142 SEC61GP60059 68 aa4.58□□□□□ -1.68
HNRNPC-223ENST00000556142 A6NED7 52 aa4.57□□□□□ -1.68
HNRNPC-223ENST00000556142 A8MU10 97 aa4.57□□□□□ -1.68
HNRNPC-223ENST00000556142 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
HNRNPC-223ENST00000556142 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
HNRNPC-223ENST00000556142 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
HNRNPC-223ENST00000556142 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
HNRNPC-223ENST00000556142 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
HNRNPC-223ENST00000556142 UQCR11O14957 56 aa4.53□□□□□ -1.68
HNRNPC-223ENST00000556142 H0YAA0 97 aa4.53□□□□□ -1.69
HNRNPC-223ENST00000556142 PRO0628Q9UI54 55 aa4.53□□□□□ -1.69
HNRNPC-223ENST00000556142 A0A1B0GU33 70 aa4.52□□□□□ -1.69
HNRNPC-223ENST00000556142 P0C880 135 aa4.51□□□□□ -1.69
HNRNPC-223ENST00000556142 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
HNRNPC-223ENST00000556142 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
HNRNPC-223ENST00000556142 MT1HP80294 61 aa4.49□□□□□ -1.69
HNRNPC-223ENST00000556142 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
HNRNPC-223ENST00000556142 M0R2T5 61 aa4.41□□□□□ -1.7
HNRNPC-223ENST00000556142 M0QZ58 72 aa4.37□□□□□ -1.71
HNRNPC-223ENST00000556142 A6NN06 94 aa4.36□□□□□ -1.71
HNRNPC-223ENST00000556142 USH2AO75445 5202 aa4.34□□□□□ -1.71
HNRNPC-223ENST00000556142 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
HNRNPC-223ENST00000556142 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
HNRNPC-223ENST00000556142 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
HNRNPC-223ENST00000556142 A0A0D9SG42 100 aa4.31□□□□□ -1.72
HNRNPC-223ENST00000556142 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
HNRNPC-223ENST00000556142 R4GN34 69 aa4.29□□□□□ -1.72
HNRNPC-223ENST00000556142 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
HNRNPC-223ENST00000556142 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
HNRNPC-223ENST00000556142 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
HNRNPC-223ENST00000556142 MT2AP02795 61 aa4.26□□□□□ -1.73
HNRNPC-223ENST00000556142 MT1FP04733 61 aa4.24□□□□□ -1.73
HNRNPC-223ENST00000556142 K7ERS5 55 aa4.22□□□□□ -1.73
HNRNPC-223ENST00000556142 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.73
HNRNPC-223ENST00000556142 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
HNRNPC-223ENST00000556142 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
HNRNPC-223ENST00000556142 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
HNRNPC-223ENST00000556142 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
HNRNPC-223ENST00000556142 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
HNRNPC-223ENST00000556142 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
HNRNPC-223ENST00000556142 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
HNRNPC-223ENST00000556142 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
HNRNPC-223ENST00000556142 ROMO1P60602 79 aa4.12□□□□□ -1.75
HNRNPC-223ENST00000556142 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
HNRNPC-223ENST00000556142 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
HNRNPC-223ENST00000556142 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
HNRNPC-223ENST00000556142 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
HNRNPC-223ENST00000556142 MT1BP07438 61 aa4.06□□□□□ -1.76
HNRNPC-223ENST00000556142 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
HNRNPC-223ENST00000556142 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
HNRNPC-223ENST00000556142 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
HNRNPC-223ENST00000556142 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
HNRNPC-223ENST00000556142 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
HNRNPC-223ENST00000556142 NEBP20929 6669 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms