RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	LCE5A	Q5TCM9	118 aa		5.1	□□□□□ -1.59
HNRNPC-223	ENST00000556142		Q75L30	129 aa		5.1	□□□□□ -1.59
HNRNPC-223	ENST00000556142	KRTAP9-8	Q9BYQ0	159 aa		5.09	□□□□□ -1.59
HNRNPC-223	ENST00000556142	SERP1	Q9Y6X1	66 aa		5.09	□□□□□ -1.59
HNRNPC-223	ENST00000556142	PRR4	Q16378	134 aa		5.07	□□□□□ -1.6
HNRNPC-223	ENST00000556142	KRTAP5-3	Q6L8H2	238 aa		5.07	□□□□□ -1.6
HNRNPC-223	ENST00000556142	HRES1	P13985	223 aa		5.05	□□□□□ -1.6
HNRNPC-223	ENST00000556142	KRTAP9-3	Q9BYQ3	159 aa		5.04	□□□□□ -1.6
HNRNPC-223	ENST00000556142	IGKV2D-30	A0A075B6S6	120 aa		5.04	□□□□□ -1.6
HNRNPC-223	ENST00000556142	RPL37	P61927	97 aa	Known RBP	5.04	□□□□□ -1.6
HNRNPC-223	ENST00000556142	FAT4	Q6V0I7	4981 aa		5.02	□□□□□ -1.61
HNRNPC-223	ENST00000556142	MUC2	Q02817	5179 aa		5.01	□□□□□ -1.61
HNRNPC-223	ENST00000556142	LPA	P08519	4548 aa		5.01	□□□□□ -1.61
HNRNPC-223	ENST00000556142	TPRXL	Q17RH7	258 aa		5.01	□□□□□ -1.61
HNRNPC-223	ENST00000556142	C7orf65	Q6ZTY9	151 aa		5.01	□□□□□ -1.61
HNRNPC-223	ENST00000556142	DMAC1	Q96GE9	116 aa		4.99	□□□□□ -1.61
HNRNPC-223	ENST00000556142	SPINK7	P58062	85 aa		4.98	□□□□□ -1.61
HNRNPC-223	ENST00000556142	ATP11AUN	Q6ZP68	121 aa		4.97	□□□□□ -1.61
HNRNPC-223	ENST00000556142	SMIM26	A0A096LP01	95 aa		4.96	□□□□□ -1.62
HNRNPC-223	ENST00000556142	COA5	Q86WW8	74 aa		4.96	□□□□□ -1.62
HNRNPC-223	ENST00000556142	ACYP2	P14621	99 aa		4.94	□□□□□ -1.62
HNRNPC-223	ENST00000556142	KRTAP3-1	Q9BYR8	98 aa		4.93	□□□□□ -1.62
HNRNPC-223	ENST00000556142	MUC17	Q685J3	4493 aa		4.93	□□□□□ -1.62
HNRNPC-223	ENST00000556142	C4orf26	Q17RF5	130 aa		4.91	□□□□□ -1.62
HNRNPC-223	ENST00000556142		A8MUN3	132 aa		4.89	□□□□□ -1.63
HNRNPC-223	ENST00000556142		Q1T7F1	81 aa		4.87	□□□□□ -1.63
HNRNPC-223	ENST00000556142	COX6B2	Q6YFQ2	88 aa		4.87	□□□□□ -1.63
HNRNPC-223	ENST00000556142	MPLKIP	Q8TAP9	179 aa		4.85	□□□□□ -1.63
HNRNPC-223	ENST00000556142	CRCT1	Q9UGL9	99 aa		4.84	□□□□□ -1.63
HNRNPC-223	ENST00000556142	FSIP2	Q5CZC0	6907 aa		4.83	□□□□□ -1.64
HNRNPC-223	ENST00000556142	LINC01558	Q9Y6Z2	57 aa		4.82	□□□□□ -1.64
HNRNPC-223	ENST00000556142	CHKB-CPT1B	H3BT56	60 aa		4.81	□□□□□ -1.64
HNRNPC-223	ENST00000556142	SEC61B	P60468	96 aa	Known RBP	4.81	□□□□□ -1.64
HNRNPC-223	ENST00000556142		V9GYY9	64 aa		4.81	□□□□□ -1.64
HNRNPC-223	ENST00000556142	KRTAP4-1	Q9BYQ7	146 aa		4.8	□□□□□ -1.64
HNRNPC-223	ENST00000556142		Q5VV11	94 aa		4.75	□□□□□ -1.65
HNRNPC-223	ENST00000556142	PSPHP1	O15172	72 aa		4.74	□□□□□ -1.65
HNRNPC-223	ENST00000556142	PRR15L	Q9BU68	103 aa		4.73	□□□□□ -1.65
HNRNPC-223	ENST00000556142	KRTAP19-2	Q3LHN2	52 aa		4.72	□□□□□ -1.65
HNRNPC-223	ENST00000556142	H1FX-AS1	Q4G0G2	97 aa		4.72	□□□□□ -1.65
HNRNPC-223	ENST00000556142	RBM12B-AS1	Q9P1G2	102 aa		4.71	□□□□□ -1.66
HNRNPC-223	ENST00000556142	LCA10	Q71F78	164 aa		4.7	□□□□□ -1.66
HNRNPC-223	ENST00000556142	SPTSSB	Q8NFR3	76 aa		4.7	□□□□□ -1.66
HNRNPC-223	ENST00000556142		S4R3F8	94 aa		4.69	□□□□□ -1.66
HNRNPC-223	ENST00000556142		A0A1B0GU69	56 aa		4.65	□□□□□ -1.66
HNRNPC-223	ENST00000556142	KRTAP10-6	P60371	365 aa	Predicted RBP	4.59	□□□□□ -1.67
HNRNPC-223	ENST00000556142	SEC61G	P60059	68 aa		4.58	□□□□□ -1.68
HNRNPC-223	ENST00000556142		A6NED7	52 aa		4.57	□□□□□ -1.68
HNRNPC-223	ENST00000556142		A8MU10	97 aa		4.57	□□□□□ -1.68
HNRNPC-223	ENST00000556142	BRK1	Q8WUW1	75 aa		4.57	□□□□□ -1.68
HNRNPC-223	ENST00000556142	CSAG1	Q6PB30	78 aa		4.57	□□□□□ -1.68
HNRNPC-223	ENST00000556142	CDC42SE1	Q9NRR8	79 aa		4.55	□□□□□ -1.68
HNRNPC-223	ENST00000556142	SPATA8	Q6RVD6	105 aa		4.54	□□□□□ -1.68
HNRNPC-223	ENST00000556142	FLG	P20930	4061 aa	Predicted RBP	4.53	□□□□□ -1.68
HNRNPC-223	ENST00000556142	UQCR11	O14957	56 aa		4.53	□□□□□ -1.68
HNRNPC-223	ENST00000556142		H0YAA0	97 aa		4.53	□□□□□ -1.69
HNRNPC-223	ENST00000556142	PRO0628	Q9UI54	55 aa		4.53	□□□□□ -1.69
HNRNPC-223	ENST00000556142		A0A1B0GU33	70 aa		4.52	□□□□□ -1.69
HNRNPC-223	ENST00000556142		P0C880	135 aa		4.51	□□□□□ -1.69
HNRNPC-223	ENST00000556142	MIR22HG	Q0VDD5	57 aa		4.5	□□□□□ -1.69
HNRNPC-223	ENST00000556142	ADM2	Q7Z4H4	148 aa		4.5	□□□□□ -1.69
HNRNPC-223	ENST00000556142	MT1H	P80294	61 aa		4.49	□□□□□ -1.69
HNRNPC-223	ENST00000556142	KRTAP13-4	Q3LI77	160 aa		4.46	□□□□□ -1.7
HNRNPC-223	ENST00000556142		M0R2T5	61 aa		4.41	□□□□□ -1.7
HNRNPC-223	ENST00000556142		M0QZ58	72 aa		4.37	□□□□□ -1.71
HNRNPC-223	ENST00000556142		A6NN06	94 aa		4.36	□□□□□ -1.71
HNRNPC-223	ENST00000556142	USH2A	O75445	5202 aa		4.34	□□□□□ -1.71
HNRNPC-223	ENST00000556142	PMAIP1	Q13794	54 aa		4.33	□□□□□ -1.72
HNRNPC-223	ENST00000556142	SSPO	A2VEC9	5147 aa		4.33	□□□□□ -1.72
HNRNPC-223	ENST00000556142	SVIP	Q8NHG7	77 aa		4.32	□□□□□ -1.72
HNRNPC-223	ENST00000556142		A0A0D9SG42	100 aa		4.31	□□□□□ -1.72
HNRNPC-223	ENST00000556142	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.3	□□□□□ -1.72
HNRNPC-223	ENST00000556142		R4GN34	69 aa		4.29	□□□□□ -1.72
HNRNPC-223	ENST00000556142	KRTAP12-1	P59990	96 aa		4.28	□□□□□ -1.72
HNRNPC-223	ENST00000556142	KRTAP12-2	P59991	146 aa		4.27	□□□□□ -1.73
HNRNPC-223	ENST00000556142	CRIPT	Q9P021	101 aa		4.27	□□□□□ -1.73
HNRNPC-223	ENST00000556142	MT2A	P02795	61 aa		4.26	□□□□□ -1.73
HNRNPC-223	ENST00000556142	MT1F	P04733	61 aa		4.24	□□□□□ -1.73
HNRNPC-223	ENST00000556142		K7ERS5	55 aa		4.22	□□□□□ -1.73
HNRNPC-223	ENST00000556142	MACF1	Q9UPN3	7388 aa	Known RBP	4.21	□□□□□ -1.73
HNRNPC-223	ENST00000556142	SYNE2	Q8WXH0	6885 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPC-223	ENST00000556142	SPINT4	Q6UDR6	99 aa		4.21	□□□□□ -1.74
HNRNPC-223	ENST00000556142	SPRR2G	Q9BYE4	73 aa		4.21	□□□□□ -1.74
HNRNPC-223	ENST00000556142	LINC01554	Q52M75	96 aa		4.2	□□□□□ -1.74
HNRNPC-223	ENST00000556142	KRTAP15-1	Q3LI76	137 aa		4.19	□□□□□ -1.74
HNRNPC-223	ENST00000556142	KTN1-AS1	Q86SY8	53 aa		4.19	□□□□□ -1.74
HNRNPC-223	ENST00000556142	KRTAP10-10	P60014	251 aa		4.18	□□□□□ -1.74
HNRNPC-223	ENST00000556142	KRTAP23-1	A1A580	65 aa		4.16	□□□□□ -1.74
HNRNPC-223	ENST00000556142	ROMO1	P60602	79 aa		4.12	□□□□□ -1.75
HNRNPC-223	ENST00000556142	KRTAP19-8	Q3LI54	63 aa		4.1	□□□□□ -1.75
HNRNPC-223	ENST00000556142	KRTAP6-3	Q3LI67	103 aa		4.1	□□□□□ -1.75
HNRNPC-223	ENST00000556142	PRAC1	Q96KF2	57 aa		4.09	□□□□□ -1.75
HNRNPC-223	ENST00000556142	C10orf95	Q9H7T3	257 aa		4.06	□□□□□ -1.76
HNRNPC-223	ENST00000556142	MT1B	P07438	61 aa		4.06	□□□□□ -1.76
HNRNPC-223	ENST00000556142	KRTAP19-6	Q3LI70	58 aa		4.06	□□□□□ -1.76
HNRNPC-223	ENST00000556142	PLAC4	Q8WY50	150 aa		4.02	□□□□□ -1.77
HNRNPC-223	ENST00000556142	CAMK2N1	Q7Z7J9	78 aa		4.01	□□□□□ -1.77
HNRNPC-223	ENST00000556142	KRTAP25-1	Q3LHN0	102 aa		3.98	□□□□□ -1.77
HNRNPC-223	ENST00000556142	KRTAP20-1	Q3LI63	56 aa		3.98	□□□□□ -1.77
HNRNPC-223	ENST00000556142	NEB	P20929	6669 aa		3.98	□□□□□ -1.77

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