RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 DNAH10Q8IVF4 4471 aa3.25□□□□□ -1.89
NEMF-209ENST00000556074 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
NEMF-209ENST00000556074 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
NEMF-209ENST00000556074 LELP1Q5T871 98 aa3.24□□□□□ -1.89
NEMF-209ENST00000556074 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
NEMF-209ENST00000556074 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
NEMF-209ENST00000556074 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
NEMF-209ENST00000556074 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
NEMF-209ENST00000556074 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
NEMF-209ENST00000556074 DEFB130BP0DP73 79 aa3.21□□□□□ -1.9
NEMF-209ENST00000556074 DEFB130AP0DP74 79 aa3.21□□□□□ -1.9
NEMF-209ENST00000556074 FLG2Q5D862 2391 aaPredicted RBP3.21□□□□□ -1.9
NEMF-209ENST00000556074 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
NEMF-209ENST00000556074 KLK9Q2XQG4 91 aa3.19□□□□□ -1.9
NEMF-209ENST00000556074 A0A096LPF7 62 aa3.19□□□□□ -1.9
NEMF-209ENST00000556074 FAT2Q9NYQ8 4349 aa3.18□□□□□ -1.9
NEMF-209ENST00000556074 NOP10Q9NPE3 64 aaKnown RBP3.17□□□□□ -1.9
NEMF-209ENST00000556074 COX6A2Q02221 97 aa3.17□□□□□ -1.9
NEMF-209ENST00000556074 FAT1Q14517 4588 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 DNAH11Q96DT5 4516 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 DYNC1H1Q14204 4646 aaKnown RBP3.16□□□□□ -1.9
NEMF-209ENST00000556074 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 C6orf48Q9UBA6 75 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
NEMF-209ENST00000556074 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
NEMF-209ENST00000556074 KRTAP9-8Q9BYQ0 159 aa3.14□□□□□ -1.91
NEMF-209ENST00000556074 APLNQ9ULZ1 77 aa3.14□□□□□ -1.91
NEMF-209ENST00000556074 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
NEMF-209ENST00000556074 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
NEMF-209ENST00000556074 DEFB104AQ8WTQ1 72 aa3.14□□□□□ -1.91
NEMF-209ENST00000556074 HERC2O95714 4834 aa3.13□□□□□ -1.91
NEMF-209ENST00000556074 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
NEMF-209ENST00000556074 SPART-AS1P0CW21 52 aa3.13□□□□□ -1.91
NEMF-209ENST00000556074 Q6ZSA8 131 aa3.13□□□□□ -1.91
NEMF-209ENST00000556074 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
NEMF-209ENST00000556074 PKD1P98161 4303 aa3.12□□□□□ -1.91
NEMF-209ENST00000556074 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
NEMF-209ENST00000556074 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
NEMF-209ENST00000556074 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
NEMF-209ENST00000556074 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
NEMF-209ENST00000556074 HERC1Q15751 4861 aa3.11□□□□□ -1.91
NEMF-209ENST00000556074 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
NEMF-209ENST00000556074 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
NEMF-209ENST00000556074 HSPG2P98160 4391 aa3.1□□□□□ -1.91
NEMF-209ENST00000556074 WFDC13Q8IUB5 93 aa3.09□□□□□ -1.91
NEMF-209ENST00000556074 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
NEMF-209ENST00000556074 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
NEMF-209ENST00000556074 RPL39P62891 51 aaKnown RBP3.07□□□□□ -1.92
NEMF-209ENST00000556074 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
NEMF-209ENST00000556074 A8MTW9 85 aa3.06□□□□□ -1.92
NEMF-209ENST00000556074 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
NEMF-209ENST00000556074 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
NEMF-209ENST00000556074 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
NEMF-209ENST00000556074 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
NEMF-209ENST00000556074 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
NEMF-209ENST00000556074 PRO0255Q9UI72 69 aa3.02□□□□□ -1.93
NEMF-209ENST00000556074 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
NEMF-209ENST00000556074 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
NEMF-209ENST00000556074 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
NEMF-209ENST00000556074 SPRR1AP35321 89 aa3□□□□□ -1.93
NEMF-209ENST00000556074 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
NEMF-209ENST00000556074 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
NEMF-209ENST00000556074 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
NEMF-209ENST00000556074 UBR4Q5T4S7 5183 aa2.98□□□□□ -1.93
NEMF-209ENST00000556074 DNAH8Q96JB1 4490 aa2.97□□□□□ -1.93
NEMF-209ENST00000556074 IGLV5-48A0A075B6I7 105 aa2.96□□□□□ -1.94
NEMF-209ENST00000556074 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
NEMF-209ENST00000556074 H3BNG1 76 aa2.93□□□□□ -1.94
NEMF-209ENST00000556074 Q5VSD8 79 aa2.93□□□□□ -1.94
NEMF-209ENST00000556074 LINC01556Q5JQF7 62 aa2.92□□□□□ -1.94
NEMF-209ENST00000556074 DEFB105AQ8NG35 78 aa2.91□□□□□ -1.94
NEMF-209ENST00000556074 M0QY20 66 aa2.91□□□□□ -1.94
NEMF-209ENST00000556074 LRP2P98164 4655 aa2.91□□□□□ -1.94
NEMF-209ENST00000556074 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.94
NEMF-209ENST00000556074 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
NEMF-209ENST00000556074 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
NEMF-209ENST00000556074 PKHD1L1Q86WI1 4243 aa2.85□□□□□ -1.95
NEMF-209ENST00000556074 MUC2Q02817 5179 aa2.85□□□□□ -1.95
NEMF-209ENST00000556074 SPRR1BP22528 89 aa2.85□□□□□ -1.95
NEMF-209ENST00000556074 LPAP08519 4548 aa2.84□□□□□ -1.95
NEMF-209ENST00000556074 A0A096LNI7 61 aa2.83□□□□□ -1.96
NEMF-209ENST00000556074 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
NEMF-209ENST00000556074 TOMM7Q9P0U1 55 aa2.81□□□□□ -1.96
NEMF-209ENST00000556074 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
NEMF-209ENST00000556074 KRTAP13-1Q8IUC0 172 aa2.79□□□□□ -1.96
NEMF-209ENST00000556074 TNXBP22105 4242 aa2.77□□□□□ -1.97
NEMF-209ENST00000556074 PRLHP81277 87 aa2.77□□□□□ -1.97
NEMF-209ENST00000556074 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
NEMF-209ENST00000556074 MT1HL1P0DM35 61 aa2.75□□□□□ -1.97
NEMF-209ENST00000556074 FAT4Q6V0I7 4981 aa2.74□□□□□ -1.97
NEMF-209ENST00000556074 A0A0D9SG42 100 aa2.74□□□□□ -1.97
NEMF-209ENST00000556074 S4R3F8 94 aa2.73□□□□□ -1.97
NEMF-209ENST00000556074 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
NEMF-209ENST00000556074 SPINK6Q6UWN8 80 aa2.65□□□□□ -1.99
NEMF-209ENST00000556074 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
NEMF-209ENST00000556074 SPINK1P00995 79 aa2.59□□□□□ -2
NEMF-209ENST00000556074 C9orf92A6NGG3 77 aa2.53□□□□□ -2
NEMF-209ENST00000556074 KRTAP4-1Q9BYQ7 146 aa2.51□□□□□ -2.01
NEMF-209ENST00000556074 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms