RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 SLC24A1O60721 1099 aa15.7■□□□□ 0.1
NEMF-209ENST00000556074 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
NEMF-209ENST00000556074 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
NEMF-209ENST00000556074 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
NEMF-209ENST00000556074 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
NEMF-209ENST00000556074 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
NEMF-209ENST00000556074 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
NEMF-209ENST00000556074 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
NEMF-209ENST00000556074 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
NEMF-209ENST00000556074 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
NEMF-209ENST00000556074 KCNA4P22459 653 aa13.91□□□□□ -0.18
NEMF-209ENST00000556074 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
NEMF-209ENST00000556074 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
NEMF-209ENST00000556074 ARXQ96QS3 562 aa13.35□□□□□ -0.27
NEMF-209ENST00000556074 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
NEMF-209ENST00000556074 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
NEMF-209ENST00000556074 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
NEMF-209ENST00000556074 APLP2Q06481 763 aa13.12□□□□□ -0.31
NEMF-209ENST00000556074 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
NEMF-209ENST00000556074 BCANQ96GW7 911 aa13.02□□□□□ -0.33
NEMF-209ENST00000556074 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
NEMF-209ENST00000556074 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
NEMF-209ENST00000556074 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
NEMF-209ENST00000556074 HOMEZQ8IX15 550 aa12.93□□□□□ -0.34
NEMF-209ENST00000556074 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
NEMF-209ENST00000556074 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
NEMF-209ENST00000556074 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.35
NEMF-209ENST00000556074 ZBTB22O15209 634 aa12.79□□□□□ -0.36
NEMF-209ENST00000556074 MYT1Q01538 1121 aa12.78□□□□□ -0.36
NEMF-209ENST00000556074 ADRA2BP18089 450 aa12.77□□□□□ -0.37
NEMF-209ENST00000556074 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
NEMF-209ENST00000556074 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
NEMF-209ENST00000556074 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
NEMF-209ENST00000556074 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
NEMF-209ENST00000556074 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
NEMF-209ENST00000556074 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
NEMF-209ENST00000556074 FKBP8Q14318 412 aa12.42□□□□□ -0.42
NEMF-209ENST00000556074 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
NEMF-209ENST00000556074 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
NEMF-209ENST00000556074 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
NEMF-209ENST00000556074 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
NEMF-209ENST00000556074 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
NEMF-209ENST00000556074 FBLN2P98095 1184 aa12.22□□□□□ -0.45
NEMF-209ENST00000556074 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
NEMF-209ENST00000556074 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
NEMF-209ENST00000556074 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
NEMF-209ENST00000556074 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
NEMF-209ENST00000556074 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
NEMF-209ENST00000556074 HRCP23327 699 aa12.03□□□□□ -0.48
NEMF-209ENST00000556074 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
NEMF-209ENST00000556074 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
NEMF-209ENST00000556074 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
NEMF-209ENST00000556074 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
NEMF-209ENST00000556074 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
NEMF-209ENST00000556074 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
NEMF-209ENST00000556074 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
NEMF-209ENST00000556074 NBR1Q14596 966 aa11.75□□□□□ -0.53
NEMF-209ENST00000556074 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
NEMF-209ENST00000556074 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
NEMF-209ENST00000556074 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
NEMF-209ENST00000556074 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
NEMF-209ENST00000556074 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
NEMF-209ENST00000556074 PKD2Q13563 968 aa11.6□□□□□ -0.55
NEMF-209ENST00000556074 IGSF3O75054 1194 aa11.54□□□□□ -0.56
NEMF-209ENST00000556074 CHMP4AQ9BY43 222 aa11.5□□□□□ -0.57
NEMF-209ENST00000556074 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
NEMF-209ENST00000556074 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
NEMF-209ENST00000556074 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
NEMF-209ENST00000556074 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
NEMF-209ENST00000556074 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
NEMF-209ENST00000556074 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
NEMF-209ENST00000556074 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
NEMF-209ENST00000556074 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
NEMF-209ENST00000556074 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
NEMF-209ENST00000556074 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
NEMF-209ENST00000556074 ARID3AQ99856 593 aa11.39□□□□□ -0.59
NEMF-209ENST00000556074 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
NEMF-209ENST00000556074 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
NEMF-209ENST00000556074 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
NEMF-209ENST00000556074 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
NEMF-209ENST00000556074 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
NEMF-209ENST00000556074 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
NEMF-209ENST00000556074 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
NEMF-209ENST00000556074 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
NEMF-209ENST00000556074 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
NEMF-209ENST00000556074 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
NEMF-209ENST00000556074 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
NEMF-209ENST00000556074 UBE2Q2Q8WVN8 375 aa11.24□□□□□ -0.61
NEMF-209ENST00000556074 ZMYND15Q9H091 742 aa11.23□□□□□ -0.61
NEMF-209ENST00000556074 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.62
NEMF-209ENST00000556074 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
NEMF-209ENST00000556074 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
NEMF-209ENST00000556074 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
NEMF-209ENST00000556074 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
NEMF-209ENST00000556074 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
NEMF-209ENST00000556074 RGL2O15211 777 aa11.09□□□□□ -0.63
NEMF-209ENST00000556074 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
NEMF-209ENST00000556074 ARID3CA6NKF2 412 aa11.08□□□□□ -0.64
NEMF-209ENST00000556074 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
NEMF-209ENST00000556074 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms