RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 C9orf92A6NGG3 77 aa12.77□□□□□ -0.37
STRN3-207ENST00000555358 A8MUU9 505 aa12.75□□□□□ -0.37
STRN3-207ENST00000555358 C20orf166-AS1Q96NR2 134 aa12.75□□□□□ -0.37
STRN3-207ENST00000555358 KRTAP3-1Q9BYR8 98 aa12.68□□□□□ -0.38
STRN3-207ENST00000555358 BIRC6Q9NR09 4857 aa12.66□□□□□ -0.38
STRN3-207ENST00000555358 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
STRN3-207ENST00000555358 H0YAA0 97 aa12.58□□□□□ -0.4
STRN3-207ENST00000555358 HERC2O95714 4834 aa12.56□□□□□ -0.4
STRN3-207ENST00000555358 LINC01554Q52M75 96 aa12.48□□□□□ -0.41
STRN3-207ENST00000555358 A0A1B0GU33 70 aa12.46□□□□□ -0.41
STRN3-207ENST00000555358 CSAG1Q6PB30 78 aa12.46□□□□□ -0.42
STRN3-207ENST00000555358 H1FX-AS1Q4G0G2 97 aa12.43□□□□□ -0.42
STRN3-207ENST00000555358 COX6B2Q6YFQ2 88 aa12.39□□□□□ -0.43
STRN3-207ENST00000555358 XP32Q5T750 250 aa12.36□□□□□ -0.43
STRN3-207ENST00000555358 J3QL48 77 aa12.3□□□□□ -0.44
STRN3-207ENST00000555358 LPAP08519 4548 aa12.28□□□□□ -0.44
STRN3-207ENST00000555358 RPL37P61927 97 aaKnown RBP12.28□□□□□ -0.44
STRN3-207ENST00000555358 LRP2P98164 4655 aa12.22□□□□□ -0.45
STRN3-207ENST00000555358 TPRXLQ17RH7 258 aa12.22□□□□□ -0.45
STRN3-207ENST00000555358 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
STRN3-207ENST00000555358 KRTAP25-1Q3LHN0 102 aa12.13□□□□□ -0.47
STRN3-207ENST00000555358 PCLOQ9Y6V0 5065 aa12.09□□□□□ -0.47
STRN3-207ENST00000555358 KRTAP10-6P60371 365 aaPredicted RBP12.08□□□□□ -0.48
STRN3-207ENST00000555358 K7ERS5 55 aa12.05□□□□□ -0.48
STRN3-207ENST00000555358 KRTAP3-2Q9BYR7 98 aa11.99□□□□□ -0.49
STRN3-207ENST00000555358 KRTAP13-4Q3LI77 160 aa11.98□□□□□ -0.49
STRN3-207ENST00000555358 HERC1Q15751 4861 aa11.94□□□□□ -0.5
STRN3-207ENST00000555358 S4R3F8 94 aa11.93□□□□□ -0.5
STRN3-207ENST00000555358 CRIPTQ9P021 101 aa11.88□□□□□ -0.51
STRN3-207ENST00000555358 ROMO1P60602 79 aa11.86□□□□□ -0.51
STRN3-207ENST00000555358 A0A0D9SG42 100 aa11.82□□□□□ -0.52
STRN3-207ENST00000555358 P0C880 135 aa11.79□□□□□ -0.52
STRN3-207ENST00000555358 SEC61BP60468 96 aaKnown RBP11.76□□□□□ -0.53
STRN3-207ENST00000555358 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
STRN3-207ENST00000555358 MUC17Q685J3 4493 aa11.71□□□□□ -0.54
STRN3-207ENST00000555358 KRTAP4-1Q9BYQ7 146 aa11.68□□□□□ -0.54
STRN3-207ENST00000555358 KRTAP12-2P59991 146 aa11.58□□□□□ -0.56
STRN3-207ENST00000555358 H3BS24 57 aa11.51□□□□□ -0.57
STRN3-207ENST00000555358 MUC2Q02817 5179 aa11.5□□□□□ -0.57
STRN3-207ENST00000555358 KRTAP12-1P59990 96 aa11.5□□□□□ -0.57
STRN3-207ENST00000555358 C10orf95Q9H7T3 257 aa11.47□□□□□ -0.57
STRN3-207ENST00000555358 SPINT4Q6UDR6 99 aa11.4□□□□□ -0.58
STRN3-207ENST00000555358 M0QZ58 72 aa11.39□□□□□ -0.59
STRN3-207ENST00000555358 KRTAP19-2Q3LHN2 52 aa11.35□□□□□ -0.59
STRN3-207ENST00000555358 UBR4Q5T4S7 5183 aa11.24□□□□□ -0.61
STRN3-207ENST00000555358 FLGP20930 4061 aaPredicted RBP11.14□□□□□ -0.63
STRN3-207ENST00000555358 RNF213Q63HN8 5207 aa11.14□□□□□ -0.63
STRN3-207ENST00000555358 KRTAP15-1Q3LI76 137 aa11.12□□□□□ -0.63
STRN3-207ENST00000555358 R4GN34 69 aa11.05□□□□□ -0.64
STRN3-207ENST00000555358 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.64
STRN3-207ENST00000555358 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
STRN3-207ENST00000555358 LORP23490 312 aaPredicted RBP10.97□□□□□ -0.65
STRN3-207ENST00000555358 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
STRN3-207ENST00000555358 MT1HP80294 61 aa10.77□□□□□ -0.69
STRN3-207ENST00000555358 M0R2T5 61 aa10.68□□□□□ -0.7
STRN3-207ENST00000555358 PLAC4Q8WY50 150 aa10.53□□□□□ -0.72
STRN3-207ENST00000555358 CAMK2N1Q7Z7J9 78 aa10.49□□□□□ -0.73
STRN3-207ENST00000555358 PP632Q6XCG6 107 aa10.44□□□□□ -0.74
STRN3-207ENST00000555358 KRTAP9-8Q9BYQ0 159 aa10.41□□□□□ -0.74
STRN3-207ENST00000555358 MT2AP02795 61 aa10.38□□□□□ -0.75
STRN3-207ENST00000555358 MT1FP04733 61 aa10.35□□□□□ -0.75
STRN3-207ENST00000555358 KRTAP10-10P60014 251 aa10.3□□□□□ -0.76
STRN3-207ENST00000555358 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
STRN3-207ENST00000555358 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.78
STRN3-207ENST00000555358 LCE2AQ5TA79 106 aaPredicted RBP10.19□□□□□ -0.78
STRN3-207ENST00000555358 TNP1P09430 55 aa10.15□□□□□ -0.78
STRN3-207ENST00000555358 KRTAP23-1A1A580 65 aa10.1□□□□□ -0.79
STRN3-207ENST00000555358 LUZP6Q538Z0 58 aa10.02□□□□□ -0.81
STRN3-207ENST00000555358 KRTAP9-3Q9BYQ3 159 aa10.01□□□□□ -0.81
STRN3-207ENST00000555358 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.83
STRN3-207ENST00000555358 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
STRN3-207ENST00000555358 MT1BP07438 61 aa9.83□□□□□ -0.84
STRN3-207ENST00000555358 LCE2BO14633 110 aa9.75□□□□□ -0.85
STRN3-207ENST00000555358 LCE3AQ5TA76 89 aa9.64□□□□□ -0.87
STRN3-207ENST00000555358 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
STRN3-207ENST00000555358 MT1XP80297 61 aa9.55□□□□□ -0.88
STRN3-207ENST00000555358 USH2AO75445 5202 aa9.55□□□□□ -0.88
STRN3-207ENST00000555358 KRTAP10-5P60370 271 aa9.54□□□□□ -0.88
STRN3-207ENST00000555358 KRTAP8-1Q8IUC2 63 aa9.41□□□□□ -0.9
STRN3-207ENST00000555358 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
STRN3-207ENST00000555358 KRTAP10-7P60409 375 aaPredicted RBP9.22□□□□□ -0.93
STRN3-207ENST00000555358 KRTAP10-12P60413 245 aa9.2□□□□□ -0.94
STRN3-207ENST00000555358 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
STRN3-207ENST00000555358 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
STRN3-207ENST00000555358 FSIP2Q5CZC0 6907 aa9.14□□□□□ -0.95
STRN3-207ENST00000555358 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
STRN3-207ENST00000555358 KRTAP19-6Q3LI70 58 aa9.01□□□□□ -0.97
STRN3-207ENST00000555358 KMT2DO14686 5537 aa8.96□□□□□ -0.97
STRN3-207ENST00000555358 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
STRN3-207ENST00000555358 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
STRN3-207ENST00000555358 KRTAP9-2Q9BYQ4 174 aa8.75□□□□□ -1.01
STRN3-207ENST00000555358 FCGBPQ9Y6R7 5405 aaPredicted RBP8.75□□□□□ -1.01
STRN3-207ENST00000555358 KRTAP19-5Q3LI72 72 aa8.74□□□□□ -1.01
STRN3-207ENST00000555358 INE1O15225 51 aa8.72□□□□□ -1.01
STRN3-207ENST00000555358 LCE3CQ5T5A8 94 aa8.64□□□□□ -1.03
STRN3-207ENST00000555358 KRTAP19-7Q3SYF9 63 aa8.52□□□□□ -1.05
STRN3-207ENST00000555358 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
STRN3-207ENST00000555358 KRTAP9-6A8MVA2 160 aa8.38□□□□□ -1.07
STRN3-207ENST00000555358 MT1EP04732 61 aa8.34□□□□□ -1.07
STRN3-207ENST00000555358 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms