RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 LOC110117498A0A087WWA1 95 aa3.93□□□□□ -1.78
SCFD1-215ENST00000555259 BAALC-AS2P0C853 105 aa3.93□□□□□ -1.78
SCFD1-215ENST00000555259 NREPQ16612 68 aa3.93□□□□□ -1.78
SCFD1-215ENST00000555259 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-215ENST00000555259 PAM16Q9Y3D7 125 aa3.93□□□□□ -1.78
SCFD1-215ENST00000555259 HCG22E2RYF7 251 aa3.92□□□□□ -1.78
SCFD1-215ENST00000555259 SPATA45Q537H7 98 aa3.92□□□□□ -1.78
SCFD1-215ENST00000555259 JMJD7-PLA2G4BH0Y9G9 81 aa3.9□□□□□ -1.78
SCFD1-215ENST00000555259 PDE6GP18545 87 aa3.89□□□□□ -1.79
SCFD1-215ENST00000555259 CXCL6P80162 114 aa3.89□□□□□ -1.79
SCFD1-215ENST00000555259 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SCFD1-215ENST00000555259 A8MUN3 132 aa3.89□□□□□ -1.79
SCFD1-215ENST00000555259 SCGB1C2P0DMR2 95 aa3.89□□□□□ -1.79
SCFD1-215ENST00000555259 CASC2Q6XLA1 102 aa3.88□□□□□ -1.79
SCFD1-215ENST00000555259 C14orf132Q9NPU4 83 aa3.87□□□□□ -1.79
SCFD1-215ENST00000555259 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
SCFD1-215ENST00000555259 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-215ENST00000555259 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
SCFD1-215ENST00000555259 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
SCFD1-215ENST00000555259 A0A087WVE0 104 aa3.85□□□□□ -1.79
SCFD1-215ENST00000555259 H0YAA0 97 aa3.85□□□□□ -1.79
SCFD1-215ENST00000555259 HSD52Q0P140 79 aa3.85□□□□□ -1.79
SCFD1-215ENST00000555259 S100A6P06703 90 aa3.84□□□□□ -1.8
SCFD1-215ENST00000555259 BPY2O14599 106 aa3.83□□□□□ -1.8
SCFD1-215ENST00000555259 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
SCFD1-215ENST00000555259 Q8N9L7 120 aa3.83□□□□□ -1.8
SCFD1-215ENST00000555259 ATXN8Q156A1 80 aa3.8□□□□□ -1.8
SCFD1-215ENST00000555259 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
SCFD1-215ENST00000555259 S100A1P23297 94 aa3.78□□□□□ -1.8
SCFD1-215ENST00000555259 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
SCFD1-215ENST00000555259 NDUFC1O43677 76 aa3.75□□□□□ -1.81
SCFD1-215ENST00000555259 R4GN34 69 aa3.73□□□□□ -1.81
SCFD1-215ENST00000555259 MT4P47944 62 aa3.72□□□□□ -1.81
SCFD1-215ENST00000555259 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.82
SCFD1-215ENST00000555259 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
SCFD1-215ENST00000555259 NAA38Q9BRA0 125 aaKnown RBP3.7□□□□□ -1.82
SCFD1-215ENST00000555259 M0QZ58 72 aa3.68□□□□□ -1.82
SCFD1-215ENST00000555259 TP53AIP1Q9HCN2 124 aa3.68□□□□□ -1.82
SCFD1-215ENST00000555259 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
SCFD1-215ENST00000555259 K7EP34 96 aa3.67□□□□□ -1.82
SCFD1-215ENST00000555259 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
SCFD1-215ENST00000555259 P0C880 135 aa3.66□□□□□ -1.82
SCFD1-215ENST00000555259 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
SCFD1-215ENST00000555259 PCP4P48539 62 aa3.65□□□□□ -1.82
SCFD1-215ENST00000555259 UQCR10Q9UDW1 63 aa3.65□□□□□ -1.82
SCFD1-215ENST00000555259 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
SCFD1-215ENST00000555259 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
SCFD1-215ENST00000555259 PYY3Q5JQD4 70 aa3.62□□□□□ -1.83
SCFD1-215ENST00000555259 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
SCFD1-215ENST00000555259 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
SCFD1-215ENST00000555259 MT1EP04732 61 aa3.61□□□□□ -1.83
SCFD1-215ENST00000555259 LOC101927531A0A1B0GV80 90 aa3.6□□□□□ -1.83
SCFD1-215ENST00000555259 H3BT86 120 aa3.59□□□□□ -1.83
SCFD1-215ENST00000555259 TSTD3H0UI37 97 aa3.59□□□□□ -1.84
SCFD1-215ENST00000555259 ACYP1P07311 99 aa3.59□□□□□ -1.84
SCFD1-215ENST00000555259 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
SCFD1-215ENST00000555259 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
SCFD1-215ENST00000555259 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
SCFD1-215ENST00000555259 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SCFD1-215ENST00000555259 M0R143 59 aa3.54□□□□□ -1.84
SCFD1-215ENST00000555259 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
SCFD1-215ENST00000555259 MT1GP13640 62 aa3.52□□□□□ -1.85
SCFD1-215ENST00000555259 BATFQ16520 125 aa3.52□□□□□ -1.85
SCFD1-215ENST00000555259 SPCS1Q9Y6A9 102 aa3.51□□□□□ -1.85
SCFD1-215ENST00000555259 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
SCFD1-215ENST00000555259 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
SCFD1-215ENST00000555259 MT1MQ8N339 61 aa3.46□□□□□ -1.85
SCFD1-215ENST00000555259 H0Y9P7 68 aa3.45□□□□□ -1.86
SCFD1-215ENST00000555259 ATOX1O00244 68 aa3.45□□□□□ -1.86
SCFD1-215ENST00000555259 A0A1W2PPM0 123 aa3.42□□□□□ -1.86
SCFD1-215ENST00000555259 UQCRQO14949 82 aa3.41□□□□□ -1.86
SCFD1-215ENST00000555259 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
SCFD1-215ENST00000555259 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SCFD1-215ENST00000555259 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
SCFD1-215ENST00000555259 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
SCFD1-215ENST00000555259 MT1LQ93083 61 aa3.38□□□□□ -1.87
SCFD1-215ENST00000555259 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
SCFD1-215ENST00000555259 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
SCFD1-215ENST00000555259 PCP4L1A6NKN8 68 aa3.35□□□□□ -1.87
SCFD1-215ENST00000555259 A0A0D9SG42 100 aa3.34□□□□□ -1.88
SCFD1-215ENST00000555259 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
SCFD1-215ENST00000555259 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
SCFD1-215ENST00000555259 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SCFD1-215ENST00000555259 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
SCFD1-215ENST00000555259 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
SCFD1-215ENST00000555259 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
SCFD1-215ENST00000555259 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SCFD1-215ENST00000555259 MP68P56378 58 aa3.25□□□□□ -1.89
SCFD1-215ENST00000555259 SEC61GP60059 68 aa3.25□□□□□ -1.89
SCFD1-215ENST00000555259 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
SCFD1-215ENST00000555259 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SCFD1-215ENST00000555259 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
SCFD1-215ENST00000555259 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-215ENST00000555259 TRAV7A0A075B6U4 112 aa3.23□□□□□ -1.89
SCFD1-215ENST00000555259 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
SCFD1-215ENST00000555259 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-215ENST00000555259 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SCFD1-215ENST00000555259 ATP5EP2Q5VTU8 51 aa3.2□□□□□ -1.9
SCFD1-215ENST00000555259 OCR1Q9BZK8 76 aa3.2□□□□□ -1.9
SCFD1-215ENST00000555259 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms