RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
RDH11-204ENST00000553578 KRTAP9-8Q9BYQ0 159 aa2.34□□□□□ -2.03
RDH11-204ENST00000553578 A0A087WTM6 91 aa2.34□□□□□ -2.04
RDH11-204ENST00000553578 SPINK1P00995 79 aa2.34□□□□□ -2.04
RDH11-204ENST00000553578 SPRR1BP22528 89 aa2.33□□□□□ -2.04
RDH11-204ENST00000553578 Q6ZRX8 168 aa2.33□□□□□ -2.04
RDH11-204ENST00000553578 MMP24-AS1A0A0U1RRL7 71 aa2.33□□□□□ -2.04
RDH11-204ENST00000553578 PRLHP81277 87 aa2.33□□□□□ -2.04
RDH11-204ENST00000553578 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
RDH11-204ENST00000553578 SACSQ9NZJ4 4579 aa2.32□□□□□ -2.04
RDH11-204ENST00000553578 Q96NJ1 140 aa2.32□□□□□ -2.04
RDH11-204ENST00000553578 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
RDH11-204ENST00000553578 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
RDH11-204ENST00000553578 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
RDH11-204ENST00000553578 PSORS1C2Q9UIG4 136 aa2.31□□□□□ -2.04
RDH11-204ENST00000553578 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
RDH11-204ENST00000553578 NBDYA0A0U1RRE5 68 aa2.3□□□□□ -2.04
RDH11-204ENST00000553578 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
RDH11-204ENST00000553578 PANO1I0J062 215 aa2.3□□□□□ -2.04
RDH11-204ENST00000553578 MRPL34Q9BQ48 92 aaKnown RBP2.29□□□□□ -2.04
RDH11-204ENST00000553578 SPINK6Q6UWN8 80 aa2.29□□□□□ -2.04
RDH11-204ENST00000553578 MT3P25713 68 aa2.28□□□□□ -2.04
RDH11-204ENST00000553578 Q6ZSA8 131 aa2.28□□□□□ -2.04
RDH11-204ENST00000553578 A0A1B0GU33 70 aa2.27□□□□□ -2.05
RDH11-204ENST00000553578 SPACA4Q8TDM5 124 aa2.27□□□□□ -2.05
RDH11-204ENST00000553578 LY6G6CO95867 125 aa2.26□□□□□ -2.05
RDH11-204ENST00000553578 RYR3Q15413 4870 aa2.26□□□□□ -2.05
RDH11-204ENST00000553578 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
RDH11-204ENST00000553578 H0YAA0 97 aa2.25□□□□□ -2.05
RDH11-204ENST00000553578 ANAPC11Q9NYG5 84 aa2.25□□□□□ -2.05
RDH11-204ENST00000553578 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
RDH11-204ENST00000553578 APOBP04114 4563 aaKnown RBP2.24□□□□□ -2.05
RDH11-204ENST00000553578 DYNC1H1Q14204 4646 aaKnown RBP2.24□□□□□ -2.05
RDH11-204ENST00000553578 MEGF8Q7Z7M0 2845 aa2.24□□□□□ -2.05
RDH11-204ENST00000553578 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
RDH11-204ENST00000553578 TPRXLQ17RH7 258 aa2.22□□□□□ -2.05
RDH11-204ENST00000553578 TGP01266 2768 aa2.22□□□□□ -2.05
RDH11-204ENST00000553578 HSPG2P98160 4391 aa2.22□□□□□ -2.05
RDH11-204ENST00000553578 TNXBP22105 4242 aa2.21□□□□□ -2.06
RDH11-204ENST00000553578 RPS29P62273 56 aaKnown RBP2.21□□□□□ -2.06
RDH11-204ENST00000553578 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
RDH11-204ENST00000553578 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
RDH11-204ENST00000553578 H1FX-AS1Q4G0G2 97 aa2.2□□□□□ -2.06
RDH11-204ENST00000553578 RYR2Q92736 4967 aa2.2□□□□□ -2.06
RDH11-204ENST00000553578 A0A0D9SG42 100 aa2.19□□□□□ -2.06
RDH11-204ENST00000553578 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
RDH11-204ENST00000553578 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
RDH11-204ENST00000553578 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
RDH11-204ENST00000553578 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
RDH11-204ENST00000553578 KMT2CQ8NEZ4 4911 aaKnown RBP2.15□□□□□ -2.07
RDH11-204ENST00000553578 KRTAP1-4P0C5Y4 121 aa2.15□□□□□ -2.07
RDH11-204ENST00000553578 FAT1Q14517 4588 aa2.14□□□□□ -2.07
RDH11-204ENST00000553578 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
RDH11-204ENST00000553578 PP632Q6XCG6 107 aa2.13□□□□□ -2.07
RDH11-204ENST00000553578 KRTAP10-6P60371 365 aaPredicted RBP2.12□□□□□ -2.07
RDH11-204ENST00000553578 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
RDH11-204ENST00000553578 COX6B2Q6YFQ2 88 aa2.11□□□□□ -2.07
RDH11-204ENST00000553578 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
RDH11-204ENST00000553578 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
RDH11-204ENST00000553578 KRTAP13-2Q52LG2 175 aa2.09□□□□□ -2.07
RDH11-204ENST00000553578 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
RDH11-204ENST00000553578 BIRC6Q9NR09 4857 aa2.07□□□□□ -2.08
RDH11-204ENST00000553578 RYR1P21817 5038 aa2.06□□□□□ -2.08
RDH11-204ENST00000553578 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
RDH11-204ENST00000553578 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
RDH11-204ENST00000553578 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
RDH11-204ENST00000553578 HERC2O95714 4834 aa2.04□□□□□ -2.08
RDH11-204ENST00000553578 S4R3F8 94 aa2.04□□□□□ -2.08
RDH11-204ENST00000553578 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
RDH11-204ENST00000553578 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
RDH11-204ENST00000553578 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
RDH11-204ENST00000553578 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
RDH11-204ENST00000553578 MYCBP2O75592 4640 aa1.99□□□□□ -2.09
RDH11-204ENST00000553578 MT1HL1P0DM35 61 aa1.98□□□□□ -2.09
RDH11-204ENST00000553578 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
RDH11-204ENST00000553578 KRTAP12-2P59991 146 aa1.98□□□□□ -2.09
RDH11-204ENST00000553578 M0R2T5 61 aa1.97□□□□□ -2.09
RDH11-204ENST00000553578 INE1O15225 51 aa1.95□□□□□ -2.1
RDH11-204ENST00000553578 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
RDH11-204ENST00000553578 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
RDH11-204ENST00000553578 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
RDH11-204ENST00000553578 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
RDH11-204ENST00000553578 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
RDH11-204ENST00000553578 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
RDH11-204ENST00000553578 KRTAP19-2Q3LHN2 52 aa1.9□□□□□ -2.1
RDH11-204ENST00000553578 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
RDH11-204ENST00000553578 Q5VSD8 79 aa1.9□□□□□ -2.11
RDH11-204ENST00000553578 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
RDH11-204ENST00000553578 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
RDH11-204ENST00000553578 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
RDH11-204ENST00000553578 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
RDH11-204ENST00000553578 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
RDH11-204ENST00000553578 M0QZ58 72 aa1.83□□□□□ -2.12
RDH11-204ENST00000553578 LPAP08519 4548 aa1.83□□□□□ -2.12
RDH11-204ENST00000553578 MUC2Q02817 5179 aa1.82□□□□□ -2.12
RDH11-204ENST00000553578 HERC1Q15751 4861 aa1.8□□□□□ -2.12
RDH11-204ENST00000553578 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
RDH11-204ENST00000553578 LRP2P98164 4655 aa1.79□□□□□ -2.12
RDH11-204ENST00000553578 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms