RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
SMARCC2-214ENST00000552674 R4GN34 69 aa4.85□□□□□ -1.63
SMARCC2-214ENST00000552674 M0QZ58 72 aa4.85□□□□□ -1.63
SMARCC2-214ENST00000552674 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.64
SMARCC2-214ENST00000552674 XP32Q5T750 250 aa4.83□□□□□ -1.64
SMARCC2-214ENST00000552674 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
SMARCC2-214ENST00000552674 RYR2Q92736 4967 aa4.82□□□□□ -1.64
SMARCC2-214ENST00000552674 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-214ENST00000552674 KRTAP10-8P60410 259 aa4.8□□□□□ -1.64
SMARCC2-214ENST00000552674 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
SMARCC2-214ENST00000552674 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
SMARCC2-214ENST00000552674 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
SMARCC2-214ENST00000552674 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
SMARCC2-214ENST00000552674 FAT1Q14517 4588 aa4.76□□□□□ -1.65
SMARCC2-214ENST00000552674 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
SMARCC2-214ENST00000552674 RYR3Q15413 4870 aa4.74□□□□□ -1.65
SMARCC2-214ENST00000552674 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
SMARCC2-214ENST00000552674 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
SMARCC2-214ENST00000552674 KRTAP21-3Q3LHN1 58 aa4.72□□□□□ -1.65
SMARCC2-214ENST00000552674 KRTAP3-2Q9BYR7 98 aa4.72□□□□□ -1.65
SMARCC2-214ENST00000552674 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
SMARCC2-214ENST00000552674 LUZP6Q538Z0 58 aa4.71□□□□□ -1.65
SMARCC2-214ENST00000552674 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
SMARCC2-214ENST00000552674 J3QL48 77 aa4.69□□□□□ -1.66
SMARCC2-214ENST00000552674 FAT3Q8TDW7 4589 aa4.68□□□□□ -1.66
SMARCC2-214ENST00000552674 KRTAP10-4P60372 401 aaPredicted RBP4.68□□□□□ -1.66
SMARCC2-214ENST00000552674 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
SMARCC2-214ENST00000552674 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
SMARCC2-214ENST00000552674 TNXBP22105 4242 aa4.62□□□□□ -1.67
SMARCC2-214ENST00000552674 HSPG2P98160 4391 aa4.61□□□□□ -1.67
SMARCC2-214ENST00000552674 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
SMARCC2-214ENST00000552674 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
SMARCC2-214ENST00000552674 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
SMARCC2-214ENST00000552674 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
SMARCC2-214ENST00000552674 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
SMARCC2-214ENST00000552674 RYR1P21817 5038 aa4.46□□□□□ -1.69
SMARCC2-214ENST00000552674 M0R2T5 61 aa4.43□□□□□ -1.7
SMARCC2-214ENST00000552674 LPAP08519 4548 aa4.42□□□□□ -1.7
SMARCC2-214ENST00000552674 TNP1P09430 55 aa4.42□□□□□ -1.7
SMARCC2-214ENST00000552674 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
SMARCC2-214ENST00000552674 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
SMARCC2-214ENST00000552674 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
SMARCC2-214ENST00000552674 KIAA1109Q2LD37 5005 aa4.34□□□□□ -1.71
SMARCC2-214ENST00000552674 LRP2P98164 4655 aa4.34□□□□□ -1.71
SMARCC2-214ENST00000552674 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
SMARCC2-214ENST00000552674 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
SMARCC2-214ENST00000552674 HERC2O95714 4834 aa4.21□□□□□ -1.74
SMARCC2-214ENST00000552674 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
SMARCC2-214ENST00000552674 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
SMARCC2-214ENST00000552674 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
SMARCC2-214ENST00000552674 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SMARCC2-214ENST00000552674 PCLOQ9Y6V0 5065 aa4.1□□□□□ -1.75
SMARCC2-214ENST00000552674 MUC2Q02817 5179 aa4.07□□□□□ -1.76
SMARCC2-214ENST00000552674 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
SMARCC2-214ENST00000552674 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
SMARCC2-214ENST00000552674 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
SMARCC2-214ENST00000552674 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
SMARCC2-214ENST00000552674 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
SMARCC2-214ENST00000552674 HERC1Q15751 4861 aa3.95□□□□□ -1.78
SMARCC2-214ENST00000552674 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
SMARCC2-214ENST00000552674 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
SMARCC2-214ENST00000552674 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
SMARCC2-214ENST00000552674 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
SMARCC2-214ENST00000552674 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
SMARCC2-214ENST00000552674 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
SMARCC2-214ENST00000552674 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
SMARCC2-214ENST00000552674 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SMARCC2-214ENST00000552674 INE1O15225 51 aa3.78□□□□□ -1.81
SMARCC2-214ENST00000552674 MT1FP04733 61 aa3.77□□□□□ -1.81
SMARCC2-214ENST00000552674 MT2AP02795 61 aa3.76□□□□□ -1.81
SMARCC2-214ENST00000552674 MT1HP80294 61 aa3.76□□□□□ -1.81
SMARCC2-214ENST00000552674 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.81
SMARCC2-214ENST00000552674 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
SMARCC2-214ENST00000552674 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
SMARCC2-214ENST00000552674 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
SMARCC2-214ENST00000552674 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
SMARCC2-214ENST00000552674 MT1XP80297 61 aa3.61□□□□□ -1.83
SMARCC2-214ENST00000552674 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
SMARCC2-214ENST00000552674 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
SMARCC2-214ENST00000552674 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
SMARCC2-214ENST00000552674 MT1BP07438 61 aa3.59□□□□□ -1.84
SMARCC2-214ENST00000552674 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
SMARCC2-214ENST00000552674 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
SMARCC2-214ENST00000552674 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
SMARCC2-214ENST00000552674 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
SMARCC2-214ENST00000552674 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
SMARCC2-214ENST00000552674 LCE2BO14633 110 aa3.43□□□□□ -1.86
SMARCC2-214ENST00000552674 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
SMARCC2-214ENST00000552674 KMT2DO14686 5537 aa3.42□□□□□ -1.86
SMARCC2-214ENST00000552674 USH2AO75445 5202 aa3.39□□□□□ -1.87
SMARCC2-214ENST00000552674 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
SMARCC2-214ENST00000552674 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
SMARCC2-214ENST00000552674 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
SMARCC2-214ENST00000552674 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SMARCC2-214ENST00000552674 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
SMARCC2-214ENST00000552674 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
SMARCC2-214ENST00000552674 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
SMARCC2-214ENST00000552674 MT1LQ93083 61 aa3.17□□□□□ -1.9
SMARCC2-214ENST00000552674 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
SMARCC2-214ENST00000552674 MT1GP13640 62 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms