RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 MT1FP04733 61 aa3.38□□□□□ -1.87
PFDN5-217ENST00000552548 SMIM20Q8N5G0 67 aa3.37□□□□□ -1.87
PFDN5-217ENST00000552548 H3BPC8 53 aa3.36□□□□□ -1.87
PFDN5-217ENST00000552548 H7BZZ5 65 aa3.35□□□□□ -1.87
PFDN5-217ENST00000552548 S4R3F8 94 aa3.35□□□□□ -1.87
PFDN5-217ENST00000552548 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
PFDN5-217ENST00000552548 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
PFDN5-217ENST00000552548 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
PFDN5-217ENST00000552548 A8MUN3 132 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 P0C880 135 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 COA5Q86WW8 74 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
PFDN5-217ENST00000552548 PCP4P48539 62 aa3.24□□□□□ -1.89
PFDN5-217ENST00000552548 NDUFC1O43677 76 aa3.23□□□□□ -1.89
PFDN5-217ENST00000552548 ACYP2P14621 99 aa3.23□□□□□ -1.89
PFDN5-217ENST00000552548 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
PFDN5-217ENST00000552548 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
PFDN5-217ENST00000552548 USH2AO75445 5202 aa3.21□□□□□ -1.9
PFDN5-217ENST00000552548 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
PFDN5-217ENST00000552548 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
PFDN5-217ENST00000552548 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
PFDN5-217ENST00000552548 MT1BP07438 61 aa3.15□□□□□ -1.91
PFDN5-217ENST00000552548 TMEM258P61165 79 aa3.14□□□□□ -1.91
PFDN5-217ENST00000552548 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
PFDN5-217ENST00000552548 H0YAA0 97 aa3.13□□□□□ -1.91
PFDN5-217ENST00000552548 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
PFDN5-217ENST00000552548 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
PFDN5-217ENST00000552548 M0QZ58 72 aa3.08□□□□□ -1.92
PFDN5-217ENST00000552548 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
PFDN5-217ENST00000552548 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
PFDN5-217ENST00000552548 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
PFDN5-217ENST00000552548 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
PFDN5-217ENST00000552548 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
PFDN5-217ENST00000552548 SPTSSBQ8NFR3 76 aa3.06□□□□□ -1.92
PFDN5-217ENST00000552548 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
PFDN5-217ENST00000552548 A8MU10 97 aa3.04□□□□□ -1.92
PFDN5-217ENST00000552548 A0A0D9SG42 100 aa3.03□□□□□ -1.92
PFDN5-217ENST00000552548 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
PFDN5-217ENST00000552548 R4GN34 69 aa3.03□□□□□ -1.92
PFDN5-217ENST00000552548 Q5VV11 94 aa3.02□□□□□ -1.93
PFDN5-217ENST00000552548 A0A1B0GU69 56 aa3.01□□□□□ -1.93
PFDN5-217ENST00000552548 PSPHP1O15172 72 aa3.01□□□□□ -1.93
PFDN5-217ENST00000552548 PRR15LQ9BU68 103 aa3.01□□□□□ -1.93
PFDN5-217ENST00000552548 A0A1B0GU33 70 aa3□□□□□ -1.93
PFDN5-217ENST00000552548 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
PFDN5-217ENST00000552548 CRIPTQ9P021 101 aa3□□□□□ -1.93
PFDN5-217ENST00000552548 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
PFDN5-217ENST00000552548 MT1XP80297 61 aa2.99□□□□□ -1.93
PFDN5-217ENST00000552548 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
PFDN5-217ENST00000552548 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
PFDN5-217ENST00000552548 SEC61GP60059 68 aa2.96□□□□□ -1.94
PFDN5-217ENST00000552548 SMIM26A0A096LP01 95 aa2.95□□□□□ -1.94
PFDN5-217ENST00000552548 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
PFDN5-217ENST00000552548 Q1T7F1 81 aa2.95□□□□□ -1.94
PFDN5-217ENST00000552548 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
PFDN5-217ENST00000552548 A6NN06 94 aa2.92□□□□□ -1.94
PFDN5-217ENST00000552548 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
PFDN5-217ENST00000552548 H3BS24 57 aa2.91□□□□□ -1.94
PFDN5-217ENST00000552548 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
PFDN5-217ENST00000552548 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
PFDN5-217ENST00000552548 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
PFDN5-217ENST00000552548 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
PFDN5-217ENST00000552548 KRTAP4-8A0A0G2JLE6 195 aa2.88□□□□□ -1.95
PFDN5-217ENST00000552548 KRTAP4-8Q9BYQ9 185 aa2.88□□□□□ -1.95
PFDN5-217ENST00000552548 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
PFDN5-217ENST00000552548 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
PFDN5-217ENST00000552548 KMT2DO14686 5537 aa2.85□□□□□ -1.95
PFDN5-217ENST00000552548 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
PFDN5-217ENST00000552548 UQCR11O14957 56 aa2.84□□□□□ -1.95
PFDN5-217ENST00000552548 A6NED7 52 aa2.83□□□□□ -1.96
PFDN5-217ENST00000552548 V9GYY9 64 aa2.83□□□□□ -1.96
PFDN5-217ENST00000552548 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
PFDN5-217ENST00000552548 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
PFDN5-217ENST00000552548 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
PFDN5-217ENST00000552548 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
PFDN5-217ENST00000552548 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
PFDN5-217ENST00000552548 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
PFDN5-217ENST00000552548 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
PFDN5-217ENST00000552548 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
PFDN5-217ENST00000552548 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
PFDN5-217ENST00000552548 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
PFDN5-217ENST00000552548 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
PFDN5-217ENST00000552548 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
PFDN5-217ENST00000552548 NEBP20929 6669 aa2.66□□□□□ -1.98
PFDN5-217ENST00000552548 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
PFDN5-217ENST00000552548 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
PFDN5-217ENST00000552548 TNP1P09430 55 aa2.63□□□□□ -1.99
PFDN5-217ENST00000552548 MT1EP04732 61 aa2.62□□□□□ -1.99
PFDN5-217ENST00000552548 K7ERS5 55 aa2.61□□□□□ -1.99
PFDN5-217ENST00000552548 ROMO1P60602 79 aa2.61□□□□□ -1.99
PFDN5-217ENST00000552548 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
PFDN5-217ENST00000552548 SPRR2EP22531 72 aa2.59□□□□□ -1.99
PFDN5-217ENST00000552548 SPRR2BP35325 72 aa2.59□□□□□ -1.99
PFDN5-217ENST00000552548 SPRR2AP35326 72 aa2.59□□□□□ -1.99
PFDN5-217ENST00000552548 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
PFDN5-217ENST00000552548 MDN1Q9NU22 5596 aa2.56□□□□□ -2
PFDN5-217ENST00000552548 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
PFDN5-217ENST00000552548 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms