RNA–Protein interactions for RNA: ENST00000549710.1

AC011601.1-201, humanhuman

TSL 3 BASIC

Gene AC011601.1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011601.1-201ENST00000549710 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
AC011601.1-201ENST00000549710 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
AC011601.1-201ENST00000549710 TENM3Q9P273 2699 aa2.65□□□□□ -1.99
AC011601.1-201ENST00000549710 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
AC011601.1-201ENST00000549710 DEFB131BA0A096LNP1 70 aa2.65□□□□□ -1.99
AC011601.1-201ENST00000549710 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
AC011601.1-201ENST00000549710 RYR3Q15413 4870 aa2.63□□□□□ -1.99
AC011601.1-201ENST00000549710 WNK1Q9H4A3 2382 aa2.63□□□□□ -1.99
AC011601.1-201ENST00000549710 HTN1P15515 57 aa2.63□□□□□ -1.99
AC011601.1-201ENST00000549710 APLNQ9ULZ1 77 aa2.63□□□□□ -1.99
AC011601.1-201ENST00000549710 NBEAL2Q6ZNJ1 2754 aa2.63□□□□□ -1.99
AC011601.1-201ENST00000549710 DEFB4AO15263 64 aa2.62□□□□□ -1.99
AC011601.1-201ENST00000549710 TP53AIP1Q9HCN2 124 aa2.62□□□□□ -1.99
AC011601.1-201ENST00000549710 K7EQZ3 153 aa2.6□□□□□ -1.99
AC011601.1-201ENST00000549710 H3BNG1 76 aa2.59□□□□□ -1.99
AC011601.1-201ENST00000549710 HTN3P15516 51 aa2.59□□□□□ -1.99
AC011601.1-201ENST00000549710 CMYA5Q8N3K9 4069 aa2.58□□□□□ -2
AC011601.1-201ENST00000549710 DNAH9Q9NYC9 4486 aa2.58□□□□□ -2
AC011601.1-201ENST00000549710 DEFB130BP0DP73 79 aa2.58□□□□□ -2
AC011601.1-201ENST00000549710 DEFB130AP0DP74 79 aa2.58□□□□□ -2
AC011601.1-201ENST00000549710 TENM2Q9NT68 2774 aa2.58□□□□□ -2
AC011601.1-201ENST00000549710 WFDC13Q8IUB5 93 aa2.57□□□□□ -2
AC011601.1-201ENST00000549710 DNAH3Q8TD57 4116 aa2.57□□□□□ -2
AC011601.1-201ENST00000549710 COL7A1Q02388 2944 aa2.57□□□□□ -2
AC011601.1-201ENST00000549710 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
AC011601.1-201ENST00000549710 RYR2Q92736 4967 aa2.56□□□□□ -2
AC011601.1-201ENST00000549710 WFDC10BQ8IUB3 73 aa2.56□□□□□ -2
AC011601.1-201ENST00000549710 EPPK1P58107 5090 aaKnown RBP2.56□□□□□ -2
AC011601.1-201ENST00000549710 LCE3AQ5TA76 89 aa2.55□□□□□ -2
AC011601.1-201ENST00000549710 NOP10Q9NPE3 64 aaKnown RBP2.55□□□□□ -2
AC011601.1-201ENST00000549710 HUWE1Q7Z6Z7 4374 aaKnown RBP2.54□□□□□ -2
AC011601.1-201ENST00000549710 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
AC011601.1-201ENST00000549710 PRO0255Q9UI72 69 aa2.54□□□□□ -2
AC011601.1-201ENST00000549710 STAB2Q8WWQ8 2551 aa2.54□□□□□ -2
AC011601.1-201ENST00000549710 DEFB105AQ8NG35 78 aa2.53□□□□□ -2
AC011601.1-201ENST00000549710 C6orf48Q9UBA6 75 aa2.53□□□□□ -2
AC011601.1-201ENST00000549710 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
AC011601.1-201ENST00000549710 DNAH1Q9P2D7 4330 aa2.52□□□□□ -2.01
AC011601.1-201ENST00000549710 SACSQ9NZJ4 4579 aa2.51□□□□□ -2.01
AC011601.1-201ENST00000549710 A0A096LPF7 62 aa2.5□□□□□ -2.01
AC011601.1-201ENST00000549710 SPRR1AP35321 89 aa2.5□□□□□ -2.01
AC011601.1-201ENST00000549710 CLPSL2Q6UWE3 100 aa2.5□□□□□ -2.01
AC011601.1-201ENST00000549710 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
AC011601.1-201ENST00000549710 HYDINQ4G0P3 5121 aa2.49□□□□□ -2.01
AC011601.1-201ENST00000549710 LELP1Q5T871 98 aa2.49□□□□□ -2.01
AC011601.1-201ENST00000549710 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
AC011601.1-201ENST00000549710 DYNC2H1Q8NCM8 4307 aaKnown RBP2.48□□□□□ -2.01
AC011601.1-201ENST00000549710 CSMD3Q7Z407 3707 aa2.48□□□□□ -2.01
AC011601.1-201ENST00000549710 LYSTQ99698 3801 aa2.47□□□□□ -2.01
AC011601.1-201ENST00000549710 A0A0D9SG42 100 aa2.47□□□□□ -2.01
AC011601.1-201ENST00000549710 LINC01556Q5JQF7 62 aa2.47□□□□□ -2.01
AC011601.1-201ENST00000549710 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
AC011601.1-201ENST00000549710 PCLOQ9Y6V0 5065 aa2.47□□□□□ -2.01
AC011601.1-201ENST00000549710 Q5VSD8 79 aa2.46□□□□□ -2.02
AC011601.1-201ENST00000549710 HERC2O95714 4834 aa2.45□□□□□ -2.02
AC011601.1-201ENST00000549710 KRTAP10-4P60372 401 aaPredicted RBP2.45□□□□□ -2.02
AC011601.1-201ENST00000549710 MRPL34Q9BQ48 92 aaKnown RBP2.45□□□□□ -2.02
AC011601.1-201ENST00000549710 SPRR1BP22528 89 aa2.44□□□□□ -2.02
AC011601.1-201ENST00000549710 PLECQ15149 4684 aaKnown RBP2.44□□□□□ -2.02
AC011601.1-201ENST00000549710 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
AC011601.1-201ENST00000549710 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
AC011601.1-201ENST00000549710 SMR3BP02814 79 aaPredicted RBP2.42□□□□□ -2.02
AC011601.1-201ENST00000549710 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
AC011601.1-201ENST00000549710 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
AC011601.1-201ENST00000549710 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
AC011601.1-201ENST00000549710 RYR1P21817 5038 aa2.38□□□□□ -2.03
AC011601.1-201ENST00000549710 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
AC011601.1-201ENST00000549710 DNAH2Q9P225 4427 aa2.36□□□□□ -2.03
AC011601.1-201ENST00000549710 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
AC011601.1-201ENST00000549710 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
AC011601.1-201ENST00000549710 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
AC011601.1-201ENST00000549710 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
AC011601.1-201ENST00000549710 SPINK6Q6UWN8 80 aa2.33□□□□□ -2.04
AC011601.1-201ENST00000549710 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
AC011601.1-201ENST00000549710 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
AC011601.1-201ENST00000549710 PKD1P98161 4303 aa2.33□□□□□ -2.04
AC011601.1-201ENST00000549710 PRLHP81277 87 aa2.32□□□□□ -2.04
AC011601.1-201ENST00000549710 COX6B2Q6YFQ2 88 aa2.32□□□□□ -2.04
AC011601.1-201ENST00000549710 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
AC011601.1-201ENST00000549710 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
AC011601.1-201ENST00000549710 DNAH17Q9UFH2 4485 aa2.31□□□□□ -2.04
AC011601.1-201ENST00000549710 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
AC011601.1-201ENST00000549710 HSPG2P98160 4391 aa2.31□□□□□ -2.04
AC011601.1-201ENST00000549710 H0YAA0 97 aa2.3□□□□□ -2.04
AC011601.1-201ENST00000549710 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
AC011601.1-201ENST00000549710 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
AC011601.1-201ENST00000549710 HERC1Q15751 4861 aa2.28□□□□□ -2.04
AC011601.1-201ENST00000549710 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
AC011601.1-201ENST00000549710 A0A096LNI7 61 aa2.26□□□□□ -2.05
AC011601.1-201ENST00000549710 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
AC011601.1-201ENST00000549710 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
AC011601.1-201ENST00000549710 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
AC011601.1-201ENST00000549710 SRRM2Q9UQ35 2752 aaKnown RBP2.24□□□□□ -2.05
AC011601.1-201ENST00000549710 FAT1Q14517 4588 aa2.24□□□□□ -2.05
AC011601.1-201ENST00000549710 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
AC011601.1-201ENST00000549710 SPINK1P00995 79 aa2.23□□□□□ -2.05
AC011601.1-201ENST00000549710 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
AC011601.1-201ENST00000549710 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
AC011601.1-201ENST00000549710 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
AC011601.1-201ENST00000549710 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms