RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 STAB1Q9NY15 2570 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 STATHP02808 62 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 DEFB1P60022 68 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 TEP1Q99973 2627 aaKnown RBP0.41□□□□□ -2.34
ARPC3-208ENST00000548878 RANBP2P49792 3224 aaKnown RBP0.41□□□□□ -2.34
ARPC3-208ENST00000548878 ZANQ9Y493 2812 aa0.41□□□□□ -2.34
ARPC3-208ENST00000548878 RELNP78509 3460 aa0.4□□□□□ -2.34
ARPC3-208ENST00000548878 MAST4O15021 2626 aa0.4□□□□□ -2.34
ARPC3-208ENST00000548878 PRUNE2Q8WUY3 3088 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 SPTAN1Q13813 2472 aaKnown RBP0.4□□□□□ -2.35
ARPC3-208ENST00000548878 DCHS2Q6V1P9 2916 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 NBPF19A0A087WUL8 3843 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 HTN1P15515 57 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 SPRR2BP35325 72 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 VPS13DQ5THJ4 4388 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 SZT2Q5T011 3432 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 FLNAP21333 2647 aaKnown RBP0.4□□□□□ -2.35
ARPC3-208ENST00000548878 ACACBO00763 2458 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 AKAP9Q99996 3911 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 CFAP47Q6ZTR5 3102 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 TNXBP22105 4242 aa0.4□□□□□ -2.35
ARPC3-208ENST00000548878 DNAH12Q6ZR08 3092 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 MGAM2Q2M2H8 2515 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 MXRA5Q9NR99 2828 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 DNAH3Q8TD57 4116 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 LAMA3Q16787 3333 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 A0A096LPF7 62 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 DEFB108BQ8NET1 73 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 BSNQ9UPA5 3926 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 MKI67P46013 3256 aaKnown RBP0.39□□□□□ -2.35
ARPC3-208ENST00000548878 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 COL7A1Q02388 2944 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 MUC3AQ02505 3323 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 FREM2Q5SZK8 3169 aa0.39□□□□□ -2.35
ARPC3-208ENST00000548878 SPENQ96T58 3664 aaKnown RBP0.39□□□□□ -2.35
ARPC3-208ENST00000548878 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 UTRNP46939 3433 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 VPS13BQ7Z7G8 4022 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
ARPC3-208ENST00000548878 SMG1Q96Q15 3661 aaKnown RBP0.38□□□□□ -2.35
ARPC3-208ENST00000548878 CSMD1Q96PZ7 3565 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 VPS13AQ96RL7 3174 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 BOD1L1Q8NFC6 3051 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 DYNC2H1Q8NCM8 4307 aaKnown RBP0.38□□□□□ -2.35
ARPC3-208ENST00000548878 MT1AP04731 61 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 DEFB136Q30KP8 78 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 DEFB110Q30KQ9 67 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 SPTBN5Q9NRC6 3674 aaKnown RBP0.38□□□□□ -2.35
ARPC3-208ENST00000548878 COL6A3P12111 3177 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 WDFY4Q6ZS81 3184 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 C5orf42Q9H799 3197 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 CMYA5Q8N3K9 4069 aa0.38□□□□□ -2.35
ARPC3-208ENST00000548878 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 PKHD1L1Q86WI1 4243 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 LAMA2P24043 3122 aaKnown RBP0.37□□□□□ -2.35
ARPC3-208ENST00000548878 DMDP11532 3685 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 XIRP2A4UGR9 3374 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 A0A096LNI7 61 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 CD52P31358 61 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 DEFB133Q30KQ1 61 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 MYO9AB2RTY4 2548 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 KALRNO60229 2985 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 ASPMQ8IZT6 3477 aa0.37□□□□□ -2.35
ARPC3-208ENST00000548878 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
ARPC3-208ENST00000548878 SACSQ9NZJ4 4579 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 GOLGB1Q14789 3259 aaKnown RBP0.36□□□□□ -2.35
ARPC3-208ENST00000548878 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 SPRR2AP35326 72 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 LYSTQ99698 3801 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 DNAH8Q96JB1 4490 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 DMXL1Q9Y485 3027 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 USP34Q70CQ2 3546 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 LOC400499M0QZD8 3231 aa0.36□□□□□ -2.35
ARPC3-208ENST00000548878 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 MYCBP2O75592 4640 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 ANK3Q12955 4377 aaKnown RBP0.35□□□□□ -2.35
ARPC3-208ENST00000548878 DNAH1Q9P2D7 4330 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
ARPC3-208ENST00000548878 LRP1Q07954 4544 aaKnown RBP0.35□□□□□ -2.35
ARPC3-208ENST00000548878 EP400Q96L91 3159 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 LAMA1P25391 3075 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 DCHS1Q96JQ0 3298 aa0.35□□□□□ -2.35
ARPC3-208ENST00000548878 PKD1P98161 4303 aa0.34□□□□□ -2.35
ARPC3-208ENST00000548878 CUBNO60494 3623 aa0.34□□□□□ -2.35
ARPC3-208ENST00000548878 SPEGQ15772 3267 aa0.34□□□□□ -2.35
ARPC3-208ENST00000548878 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.35
ARPC3-208ENST00000548878 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
ARPC3-208ENST00000548878 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.36
ARPC3-208ENST00000548878 DNAH2Q9P225 4427 aa0.33□□□□□ -2.36
ARPC3-208ENST00000548878 DNAH7Q8WXX0 4024 aa0.33□□□□□ -2.36
ARPC3-208ENST00000548878 CSMD2Q7Z408 3487 aa0.32□□□□□ -2.36
ARPC3-208ENST00000548878 BRCA2P51587 3418 aa0.32□□□□□ -2.36
ARPC3-208ENST00000548878 TRRAPQ9Y4A5 3859 aa0.32□□□□□ -2.36
ARPC3-208ENST00000548878 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
ARPC3-208ENST00000548878 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
ARPC3-208ENST00000548878 DNAH9Q9NYC9 4486 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms