RNA–Protein interactions for RNA: ENST00000546355.3

RFLNA-205, Transcript of refilin A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RFLNA, Length 2,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFLNA-205ENST00000546355 SPATA8Q6RVD6 105 aa12.85□□□□□ -0.35
RFLNA-205ENST00000546355 KTN1-AS1Q86SY8 53 aa12.71□□□□□ -0.38
RFLNA-205ENST00000546355 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
RFLNA-205ENST00000546355 A0A1B0GU33 70 aa12.58□□□□□ -0.4
RFLNA-205ENST00000546355 TPRXLQ17RH7 258 aa12.56□□□□□ -0.4
RFLNA-205ENST00000546355 H0YAA0 97 aa12.55□□□□□ -0.4
RFLNA-205ENST00000546355 H1FX-AS1Q4G0G2 97 aa12.54□□□□□ -0.4
RFLNA-205ENST00000546355 KRTAP3-3Q9BYR6 98 aa12.53□□□□□ -0.4
RFLNA-205ENST00000546355 S4R3F8 94 aa12.5□□□□□ -0.41
RFLNA-205ENST00000546355 LRP2P98164 4655 aa12.49□□□□□ -0.41
RFLNA-205ENST00000546355 LPAP08519 4548 aa12.47□□□□□ -0.41
RFLNA-205ENST00000546355 ABCA13Q86UQ4 5058 aa12.46□□□□□ -0.41
RFLNA-205ENST00000546355 KRTAP10-6P60371 365 aaPredicted RBP12.32□□□□□ -0.44
RFLNA-205ENST00000546355 ADM2Q7Z4H4 148 aa12.32□□□□□ -0.44
RFLNA-205ENST00000546355 PRAC1Q96KF2 57 aa12.3□□□□□ -0.44
RFLNA-205ENST00000546355 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
RFLNA-205ENST00000546355 KRTAP3-2Q9BYR7 98 aa12.26□□□□□ -0.45
RFLNA-205ENST00000546355 J3QL48 77 aa12.25□□□□□ -0.45
RFLNA-205ENST00000546355 P0C880 135 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 KRTAP13-4Q3LI77 160 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 HERC2O95714 4834 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 SEC61BP60468 96 aaKnown RBP12.12□□□□□ -0.47
RFLNA-205ENST00000546355 CSAG1Q6PB30 78 aa12.1□□□□□ -0.47
RFLNA-205ENST00000546355 A0A0D9SG42 100 aa12.07□□□□□ -0.48
RFLNA-205ENST00000546355 K7ERS5 55 aa12.07□□□□□ -0.48
RFLNA-205ENST00000546355 BIRC6Q9NR09 4857 aa11.99□□□□□ -0.49
RFLNA-205ENST00000546355 KRTAP4-1Q9BYQ7 146 aa11.96□□□□□ -0.49
RFLNA-205ENST00000546355 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
RFLNA-205ENST00000546355 M0QZ58 72 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 KRTAP12-2P59991 146 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 ROMO1P60602 79 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 LINC01554Q52M75 96 aa11.71□□□□□ -0.53
RFLNA-205ENST00000546355 SPINT4Q6UDR6 99 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP25-1Q3LHN0 102 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP12-1P59990 96 aa11.67□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
RFLNA-205ENST00000546355 R4GN34 69 aa11.59□□□□□ -0.55
RFLNA-205ENST00000546355 MUC2Q02817 5179 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 PCLOQ9Y6V0 5065 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 HERC1Q15751 4861 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 LORP23490 312 aaPredicted RBP11.51□□□□□ -0.57
RFLNA-205ENST00000546355 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
RFLNA-205ENST00000546355 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
RFLNA-205ENST00000546355 H3BS24 57 aa11.36□□□□□ -0.59
RFLNA-205ENST00000546355 C10orf95Q9H7T3 257 aa11.33□□□□□ -0.6
RFLNA-205ENST00000546355 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
RFLNA-205ENST00000546355 FAT4Q6V0I7 4981 aa11.06□□□□□ -0.64
RFLNA-205ENST00000546355 UBR4Q5T4S7 5183 aa10.98□□□□□ -0.65
RFLNA-205ENST00000546355 CAMK2N1Q7Z7J9 78 aa10.97□□□□□ -0.65
RFLNA-205ENST00000546355 RNF213Q63HN8 5207 aa10.97□□□□□ -0.65
RFLNA-205ENST00000546355 M0R2T5 61 aa10.91□□□□□ -0.66
RFLNA-205ENST00000546355 MT1HP80294 61 aa10.86□□□□□ -0.67
RFLNA-205ENST00000546355 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
RFLNA-205ENST00000546355 KRTAP19-1Q8IUB9 90 aa10.66□□□□□ -0.7
RFLNA-205ENST00000546355 MT2AP02795 61 aa10.61□□□□□ -0.71
RFLNA-205ENST00000546355 MT1FP04733 61 aa10.6□□□□□ -0.71
RFLNA-205ENST00000546355 KRTAP10-10P60014 251 aa10.6□□□□□ -0.71
RFLNA-205ENST00000546355 KRTAP15-1Q3LI76 137 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 KRTAP9-8Q9BYQ0 159 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
RFLNA-205ENST00000546355 TNP1P09430 55 aa10.48□□□□□ -0.73
RFLNA-205ENST00000546355 KRTAP19-8Q3LI54 63 aa10.26□□□□□ -0.77
RFLNA-205ENST00000546355 KRTAP23-1A1A580 65 aa10.21□□□□□ -0.77
RFLNA-205ENST00000546355 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
RFLNA-205ENST00000546355 MT1BP07438 61 aa10.16□□□□□ -0.78
RFLNA-205ENST00000546355 KRTAP9-3Q9BYQ3 159 aa10.12□□□□□ -0.79
RFLNA-205ENST00000546355 KRTAP10-5P60370 271 aa10.01□□□□□ -0.81
RFLNA-205ENST00000546355 MT1XP80297 61 aa10.01□□□□□ -0.81
RFLNA-205ENST00000546355 LCE3AQ5TA76 89 aa9.99□□□□□ -0.81
RFLNA-205ENST00000546355 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
RFLNA-205ENST00000546355 A0A0A0MQY5 61 aa9.78□□□□□ -0.84
RFLNA-205ENST00000546355 LCE2BO14633 110 aa9.78□□□□□ -0.84
RFLNA-205ENST00000546355 LUZP6Q538Z0 58 aa9.74□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP10-12P60413 245 aa9.73□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP10-7P60409 375 aaPredicted RBP9.72□□□□□ -0.85
RFLNA-205ENST00000546355 PRO2289Q9P1D8 64 aa9.71□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP8-1Q8IUC2 63 aa9.7□□□□□ -0.86
RFLNA-205ENST00000546355 SPRR5A0A1B0GTR4 108 aa9.63□□□□□ -0.87
RFLNA-205ENST00000546355 USH2AO75445 5202 aa9.59□□□□□ -0.87
RFLNA-205ENST00000546355 KRTAP12-3P60328 96 aa9.52□□□□□ -0.89
RFLNA-205ENST00000546355 KRTAP19-5Q3LI72 72 aa9.26□□□□□ -0.93
RFLNA-205ENST00000546355 KMT2DO14686 5537 aa9.25□□□□□ -0.93
RFLNA-205ENST00000546355 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
RFLNA-205ENST00000546355 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
RFLNA-205ENST00000546355 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
RFLNA-205ENST00000546355 LCE3CQ5T5A8 94 aa8.93□□□□□ -0.98
RFLNA-205ENST00000546355 KRTAP19-7Q3SYF9 63 aa8.92□□□□□ -0.98
RFLNA-205ENST00000546355 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
RFLNA-205ENST00000546355 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
RFLNA-205ENST00000546355 MT1EP04732 61 aa8.7□□□□□ -1.02
RFLNA-205ENST00000546355 KRTAP4-7Q9BYR0 210 aa8.65□□□□□ -1.02
RFLNA-205ENST00000546355 MT1LQ93083 61 aa8.64□□□□□ -1.03
RFLNA-205ENST00000546355 KRTAP9-6A8MVA2 160 aa8.58□□□□□ -1.04
RFLNA-205ENST00000546355 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
RFLNA-205ENST00000546355 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
RFLNA-205ENST00000546355 FCGBPQ9Y6R7 5405 aaPredicted RBP8.49□□□□□ -1.05
RFLNA-205ENST00000546355 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
RFLNA-205ENST00000546355 KRTAP4-3Q9BYR4 195 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms