RNA–Protein interactions for RNA: ENST00000545518.1

IST1-223, Transcript of IST1, ESCRT-III associated factor, human

TSL 2

Gene IST1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IST1-223	ENST00000545518	SMIM20	Q8N5G0	67 aa		5.77	□□□□□ -1.49
IST1-223	ENST00000545518	TRAV7	A0A075B6U4	112 aa		5.76	□□□□□ -1.49
IST1-223	ENST00000545518	MT1F	P04733	61 aa		5.74	□□□□□ -1.49
IST1-223	ENST00000545518		S4R3F8	94 aa		5.74	□□□□□ -1.49
IST1-223	ENST00000545518	LCA10	Q71F78	164 aa		5.72	□□□□□ -1.49
IST1-223	ENST00000545518	KRTAP4-12	Q9BQ66	201 aa		5.72	□□□□□ -1.49
IST1-223	ENST00000545518	KRTAP10-10	P60014	251 aa		5.71	□□□□□ -1.5
IST1-223	ENST00000545518		A8MUN3	132 aa		5.69	□□□□□ -1.5
IST1-223	ENST00000545518	LCE3B	Q5TA77	95 aa		5.69	□□□□□ -1.5
IST1-223	ENST00000545518	CSAG1	Q6PB30	78 aa		5.68	□□□□□ -1.5
IST1-223	ENST00000545518	KRTAP9-3	Q9BYQ3	159 aa		5.66	□□□□□ -1.5
IST1-223	ENST00000545518	SERP2	Q8N6R1	65 aa		5.65	□□□□□ -1.5
IST1-223	ENST00000545518	DMAC1	Q96GE9	116 aa		5.62	□□□□□ -1.51
IST1-223	ENST00000545518	SNURF	Q9Y675	71 aa		5.62	□□□□□ -1.51
IST1-223	ENST00000545518	KRTAP19-1	Q8IUB9	90 aa		5.61	□□□□□ -1.51
IST1-223	ENST00000545518	FSIP2	Q5CZC0	6907 aa		5.61	□□□□□ -1.51
IST1-223	ENST00000545518	NDUFC1	O43677	76 aa		5.6	□□□□□ -1.51
IST1-223	ENST00000545518	C20orf197	Q8N268	126 aa		5.6	□□□□□ -1.51
IST1-223	ENST00000545518	USH2A	O75445	5202 aa		5.56	□□□□□ -1.52
IST1-223	ENST00000545518	CRCT1	Q9UGL9	99 aa		5.56	□□□□□ -1.52
IST1-223	ENST00000545518	COX7C	P15954	63 aa		5.54	□□□□□ -1.52
IST1-223	ENST00000545518	ACYP2	P14621	99 aa		5.52	□□□□□ -1.53
IST1-223	ENST00000545518	KRTAP9-9	Q9BYP9	154 aa		5.52	□□□□□ -1.53
IST1-223	ENST00000545518	KRTAP9-4	Q9BYQ2	154 aa		5.52	□□□□□ -1.53
IST1-223	ENST00000545518	SPANXA2-OT1	Q8N9U9	137 aa		5.51	□□□□□ -1.53
IST1-223	ENST00000545518		H0YAA0	97 aa		5.5	□□□□□ -1.53
IST1-223	ENST00000545518	KRTAP4-8	A0A0G2JLE6	195 aa		5.45	□□□□□ -1.54
IST1-223	ENST00000545518	ADM2	Q7Z4H4	148 aa		5.45	□□□□□ -1.54
IST1-223	ENST00000545518	ANAPC13	Q9BS18	74 aa		5.45	□□□□□ -1.54
IST1-223	ENST00000545518	SSPO	A2VEC9	5147 aa		5.45	□□□□□ -1.54
IST1-223	ENST00000545518	CYSTM1	Q9H1C7	97 aa		5.44	□□□□□ -1.54
IST1-223	ENST00000545518	SPRR2G	Q9BYE4	73 aa		5.43	□□□□□ -1.54
IST1-223	ENST00000545518	CRIPT	Q9P021	101 aa		5.42	□□□□□ -1.54
IST1-223	ENST00000545518		H7BZZ5	65 aa		5.41	□□□□□ -1.54
IST1-223	ENST00000545518	CHKB-CPT1B	H3BT56	60 aa		5.4	□□□□□ -1.54
IST1-223	ENST00000545518	SPTSSB	Q8NFR3	76 aa		5.39	□□□□□ -1.55
IST1-223	ENST00000545518	CCDC179	H3BU77	68 aa		5.36	□□□□□ -1.55
IST1-223	ENST00000545518		P0C880	135 aa		5.36	□□□□□ -1.55
IST1-223	ENST00000545518	KRTAP19-8	Q3LI54	63 aa		5.36	□□□□□ -1.55
IST1-223	ENST00000545518	KRTAP23-1	A1A580	65 aa		5.34	□□□□□ -1.55
IST1-223	ENST00000545518	MT1B	P07438	61 aa		5.33	□□□□□ -1.56
IST1-223	ENST00000545518	KRTAP19-6	Q3LI70	58 aa		5.33	□□□□□ -1.56
IST1-223	ENST00000545518	LCE1D	Q5T752	114 aa		5.33	□□□□□ -1.56
IST1-223	ENST00000545518		Q5VV11	94 aa		5.33	□□□□□ -1.56
IST1-223	ENST00000545518	COA5	Q86WW8	74 aa		5.33	□□□□□ -1.56
IST1-223	ENST00000545518	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.31	□□□□□ -1.56
IST1-223	ENST00000545518	KRTAP19-4	Q3LI73	84 aa		5.28	□□□□□ -1.56
IST1-223	ENST00000545518		R4GN34	69 aa		5.28	□□□□□ -1.56
IST1-223	ENST00000545518	KRTAP4-7	Q9BYR0	210 aa		5.27	□□□□□ -1.57
IST1-223	ENST00000545518		M0QZ58	72 aa		5.24	□□□□□ -1.57
IST1-223	ENST00000545518	ATP5E	P56381	51 aa	Predicted RBP	5.2	□□□□□ -1.58
IST1-223	ENST00000545518		A6NN06	94 aa		5.16	□□□□□ -1.58
IST1-223	ENST00000545518	KRTAP10-5	P60370	271 aa		5.16	□□□□□ -1.58
IST1-223	ENST00000545518	TMEM258	P61165	79 aa		5.16	□□□□□ -1.58
IST1-223	ENST00000545518	LINC01554	Q52M75	96 aa		5.16	□□□□□ -1.58
IST1-223	ENST00000545518	KRTAP4-9	Q9BYQ8	210 aa		5.16	□□□□□ -1.58
IST1-223	ENST00000545518	PCP4	P48539	62 aa		5.14	□□□□□ -1.59
IST1-223	ENST00000545518	SEC61G	P60059	68 aa		5.14	□□□□□ -1.59
IST1-223	ENST00000545518	PLAC4	Q8WY50	150 aa		5.14	□□□□□ -1.59
IST1-223	ENST00000545518	LCE4A	Q5TA78	99 aa		5.12	□□□□□ -1.59
IST1-223	ENST00000545518	SERP1	Q9Y6X1	66 aa		5.12	□□□□□ -1.59
IST1-223	ENST00000545518	MACF1	Q9UPN3	7388 aa	Known RBP	5.12	□□□□□ -1.59
IST1-223	ENST00000545518	KRTAP13-4	Q3LI77	160 aa		5.11	□□□□□ -1.59
IST1-223	ENST00000545518		A0A1B0GU33	70 aa		5.06	□□□□□ -1.6
IST1-223	ENST00000545518	MT1X	P80297	61 aa		5.06	□□□□□ -1.6
IST1-223	ENST00000545518		A0A1B0GU69	56 aa		5.05	□□□□□ -1.6
IST1-223	ENST00000545518	PRO2289	Q9P1D8	64 aa		5.04	□□□□□ -1.6
IST1-223	ENST00000545518	KRTAP9-7	A8MTY7	169 aa		5.02	□□□□□ -1.61
IST1-223	ENST00000545518	SYNE2	Q8WXH0	6885 aa	Known RBP	5.01	□□□□□ -1.61
IST1-223	ENST00000545518	SPATA8	Q6RVD6	105 aa		5.01	□□□□□ -1.61
IST1-223	ENST00000545518	KRTAP4-2	Q9BYR5	136 aa		5.01	□□□□□ -1.61
IST1-223	ENST00000545518	LINC01558	Q9Y6Z2	57 aa		4.99	□□□□□ -1.61
IST1-223	ENST00000545518	KRTAP4-11	Q9BYQ6	195 aa		4.98	□□□□□ -1.61
IST1-223	ENST00000545518		A0A0D9SG42	100 aa		4.96	□□□□□ -1.62
IST1-223	ENST00000545518	PRR15L	Q9BU68	103 aa		4.96	□□□□□ -1.62
IST1-223	ENST00000545518	LCE5A	Q5TCM9	118 aa		4.94	□□□□□ -1.62
IST1-223	ENST00000545518		A0A0A0MQY5	61 aa		4.92	□□□□□ -1.62
IST1-223	ENST00000545518	KRTAP6-3	Q3LI67	103 aa		4.91	□□□□□ -1.62
IST1-223	ENST00000545518	SMIM26	A0A096LP01	95 aa		4.9	□□□□□ -1.63
IST1-223	ENST00000545518	KRTAP12-2	P59991	146 aa		4.89	□□□□□ -1.63
IST1-223	ENST00000545518	KRTAP12-1	P59990	96 aa		4.88	□□□□□ -1.63
IST1-223	ENST00000545518	CAMK2N1	Q7Z7J9	78 aa		4.88	□□□□□ -1.63
IST1-223	ENST00000545518		A8MU10	97 aa		4.87	□□□□□ -1.63
IST1-223	ENST00000545518	SPINT4	Q6UDR6	99 aa		4.87	□□□□□ -1.63
IST1-223	ENST00000545518	KMT2D	O14686	5537 aa		4.86	□□□□□ -1.63
IST1-223	ENST00000545518	KRTAP10-7	P60409	375 aa	Predicted RBP	4.83	□□□□□ -1.64
IST1-223	ENST00000545518		Q1T7F1	81 aa		4.83	□□□□□ -1.64
IST1-223	ENST00000545518		V9GYY9	64 aa		4.83	□□□□□ -1.64
IST1-223	ENST00000545518	UQCR11	O14957	56 aa		4.81	□□□□□ -1.64
IST1-223	ENST00000545518	KRTAP10-12	P60413	245 aa		4.8	□□□□□ -1.64
IST1-223	ENST00000545518	RPS28	P62857	69 aa	Known RBP	4.8	□□□□□ -1.64
IST1-223	ENST00000545518	KRTAP5-9	P26371	169 aa		4.79	□□□□□ -1.64
IST1-223	ENST00000545518	PSPHP1	O15172	72 aa		4.78	□□□□□ -1.64
IST1-223	ENST00000545518	KRTAP8-1	Q8IUC2	63 aa		4.75	□□□□□ -1.65
IST1-223	ENST00000545518	MIR22HG	Q0VDD5	57 aa		4.73	□□□□□ -1.65
IST1-223	ENST00000545518	MUC12	Q9UKN1	5478 aa		4.73	□□□□□ -1.65
IST1-223	ENST00000545518	SPRR2F	Q96RM1	72 aa		4.69	□□□□□ -1.66
IST1-223	ENST00000545518	NEB	P20929	6669 aa		4.67	□□□□□ -1.66
IST1-223	ENST00000545518	KRTAP15-1	Q3LI76	137 aa		4.67	□□□□□ -1.66
IST1-223	ENST00000545518	C10orf95	Q9H7T3	257 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms