RNA–Protein interactions for RNA: ENST00000545518.1

IST1-223, Transcript of IST1, ESCRT-III associated factor, humanhuman

TSL 2

Gene IST1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IST1-223ENST00000545518 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
IST1-223ENST00000545518 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
IST1-223ENST00000545518 ABCC9O60706 1549 aa24.93■■□□□ 1.58
IST1-223ENST00000545518 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
IST1-223ENST00000545518 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
IST1-223ENST00000545518 NACADO15069 1562 aa24.09■■□□□ 1.45
IST1-223ENST00000545518 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
IST1-223ENST00000545518 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
IST1-223ENST00000545518 DCAF1Q9Y4B6 1507 aa23.98■■□□□ 1.43
IST1-223ENST00000545518 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
IST1-223ENST00000545518 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
IST1-223ENST00000545518 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
IST1-223ENST00000545518 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
IST1-223ENST00000545518 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
IST1-223ENST00000545518 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
IST1-223ENST00000545518 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
IST1-223ENST00000545518 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
IST1-223ENST00000545518 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
IST1-223ENST00000545518 SMARCA4P51532 1647 aa22.45■■□□□ 1.18
IST1-223ENST00000545518 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
IST1-223ENST00000545518 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
IST1-223ENST00000545518 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
IST1-223ENST00000545518 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
IST1-223ENST00000545518 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
IST1-223ENST00000545518 PEG3Q9GZU2 1588 aa22.22■■□□□ 1.15
IST1-223ENST00000545518 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
IST1-223ENST00000545518 WIZO95785 1651 aa22.14■■□□□ 1.13
IST1-223ENST00000545518 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
IST1-223ENST00000545518 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
IST1-223ENST00000545518 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
IST1-223ENST00000545518 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
IST1-223ENST00000545518 NESP48681 1621 aa21.66■■□□□ 1.06
IST1-223ENST00000545518 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.05
IST1-223ENST00000545518 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
IST1-223ENST00000545518 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
IST1-223ENST00000545518 CFTRP13569 1480 aa21.51■■□□□ 1.03
IST1-223ENST00000545518 ERCC6Q03468 1493 aa21.45■■□□□ 1.03
IST1-223ENST00000545518 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
IST1-223ENST00000545518 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
IST1-223ENST00000545518 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
IST1-223ENST00000545518 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
IST1-223ENST00000545518 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
IST1-223ENST00000545518 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
IST1-223ENST00000545518 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
IST1-223ENST00000545518 CUX2O14529 1486 aa21.16■□□□□ 0.98
IST1-223ENST00000545518 WDR62O43379 1518 aa21.14■□□□□ 0.98
IST1-223ENST00000545518 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
IST1-223ENST00000545518 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
IST1-223ENST00000545518 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
IST1-223ENST00000545518 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
IST1-223ENST00000545518 CUX1P39880 1505 aa20.94■□□□□ 0.94
IST1-223ENST00000545518 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
IST1-223ENST00000545518 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
IST1-223ENST00000545518 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
IST1-223ENST00000545518 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
IST1-223ENST00000545518 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
IST1-223ENST00000545518 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
IST1-223ENST00000545518 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
IST1-223ENST00000545518 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
IST1-223ENST00000545518 SOGA1O94964 1423 aa20.78■□□□□ 0.92
IST1-223ENST00000545518 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
IST1-223ENST00000545518 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
IST1-223ENST00000545518 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
IST1-223ENST00000545518 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
IST1-223ENST00000545518 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.91e-12■■■■■ 35
IST1-223ENST00000545518 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
IST1-223ENST00000545518 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
IST1-223ENST00000545518 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
IST1-223ENST00000545518 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
IST1-223ENST00000545518 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
IST1-223ENST00000545518 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
IST1-223ENST00000545518 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
IST1-223ENST00000545518 SNAPC4Q5SXM2 1469 aa20.44■□□□□ 0.86
IST1-223ENST00000545518 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
IST1-223ENST00000545518 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
IST1-223ENST00000545518 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
IST1-223ENST00000545518 CHD1O14646 1710 aa20.39■□□□□ 0.86
IST1-223ENST00000545518 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
IST1-223ENST00000545518 FBLN2P98095 1184 aa20.35■□□□□ 0.85
IST1-223ENST00000545518 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
IST1-223ENST00000545518 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
IST1-223ENST00000545518 IGF1RP08069 1367 aa20.34■□□□□ 0.85
IST1-223ENST00000545518 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.85
IST1-223ENST00000545518 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
IST1-223ENST00000545518 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
IST1-223ENST00000545518 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
IST1-223ENST00000545518 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
IST1-223ENST00000545518 CUL7Q14999 1698 aa20.26■□□□□ 0.83
IST1-223ENST00000545518 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
IST1-223ENST00000545518 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
IST1-223ENST00000545518 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
IST1-223ENST00000545518 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
IST1-223ENST00000545518 NUP160Q12769 1436 aa20.14■□□□□ 0.81
IST1-223ENST00000545518 EEA1Q15075 1411 aa20.14■□□□□ 0.81
IST1-223ENST00000545518 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
IST1-223ENST00000545518 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
IST1-223ENST00000545518 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
IST1-223ENST00000545518 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
IST1-223ENST00000545518 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
IST1-223ENST00000545518 KIAA0586Q9BVV6 1533 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms