RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
SMG8-202ENST00000543872 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
SMG8-202ENST00000543872 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
SMG8-202ENST00000543872 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
SMG8-202ENST00000543872 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
SMG8-202ENST00000543872 PKD1P98161 4303 aa6.45□□□□□ -1.38
SMG8-202ENST00000543872 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
SMG8-202ENST00000543872 FAT1Q14517 4588 aa6.41□□□□□ -1.38
SMG8-202ENST00000543872 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
SMG8-202ENST00000543872 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
SMG8-202ENST00000543872 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
SMG8-202ENST00000543872 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
SMG8-202ENST00000543872 XP32Q5T750 250 aa6.31□□□□□ -1.4
SMG8-202ENST00000543872 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
SMG8-202ENST00000543872 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
SMG8-202ENST00000543872 HSPG2P98160 4391 aa6.25□□□□□ -1.41
SMG8-202ENST00000543872 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.41
SMG8-202ENST00000543872 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
SMG8-202ENST00000543872 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
SMG8-202ENST00000543872 M0QZ58 72 aa6.16□□□□□ -1.42
SMG8-202ENST00000543872 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
SMG8-202ENST00000543872 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
SMG8-202ENST00000543872 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
SMG8-202ENST00000543872 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
SMG8-202ENST00000543872 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
SMG8-202ENST00000543872 R4GN34 69 aa6.07□□□□□ -1.44
SMG8-202ENST00000543872 RYR2Q92736 4967 aa6.02□□□□□ -1.45
SMG8-202ENST00000543872 RYR3Q15413 4870 aa6□□□□□ -1.45
SMG8-202ENST00000543872 LPAP08519 4548 aa5.99□□□□□ -1.45
SMG8-202ENST00000543872 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
SMG8-202ENST00000543872 TNXBP22105 4242 aa5.93□□□□□ -1.46
SMG8-202ENST00000543872 LRP2P98164 4655 aa5.93□□□□□ -1.46
SMG8-202ENST00000543872 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
SMG8-202ENST00000543872 Q5VSD8 79 aa5.88□□□□□ -1.47
SMG8-202ENST00000543872 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
SMG8-202ENST00000543872 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
SMG8-202ENST00000543872 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
SMG8-202ENST00000543872 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
SMG8-202ENST00000543872 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
SMG8-202ENST00000543872 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
SMG8-202ENST00000543872 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
SMG8-202ENST00000543872 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
SMG8-202ENST00000543872 KRTAP4-5Q9BYR2 181 aa5.63□□□□□ -1.51
SMG8-202ENST00000543872 RYR1P21817 5038 aa5.62□□□□□ -1.51
SMG8-202ENST00000543872 TNP1P09430 55 aa5.6□□□□□ -1.51
SMG8-202ENST00000543872 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SMG8-202ENST00000543872 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
SMG8-202ENST00000543872 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
SMG8-202ENST00000543872 HERC2O95714 4834 aa5.49□□□□□ -1.53
SMG8-202ENST00000543872 MUC17Q685J3 4493 aa5.46□□□□□ -1.54
SMG8-202ENST00000543872 INE1O15225 51 aa5.4□□□□□ -1.54
SMG8-202ENST00000543872 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
SMG8-202ENST00000543872 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
SMG8-202ENST00000543872 MUC2Q02817 5179 aa5.35□□□□□ -1.55
SMG8-202ENST00000543872 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
SMG8-202ENST00000543872 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
SMG8-202ENST00000543872 HERC1Q15751 4861 aa5.26□□□□□ -1.57
SMG8-202ENST00000543872 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
SMG8-202ENST00000543872 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
SMG8-202ENST00000543872 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
SMG8-202ENST00000543872 M0R2T5 61 aa5.05□□□□□ -1.6
SMG8-202ENST00000543872 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
SMG8-202ENST00000543872 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
SMG8-202ENST00000543872 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
SMG8-202ENST00000543872 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
SMG8-202ENST00000543872 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
SMG8-202ENST00000543872 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
SMG8-202ENST00000543872 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
SMG8-202ENST00000543872 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
SMG8-202ENST00000543872 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
SMG8-202ENST00000543872 MT1FP04733 61 aa4.84□□□□□ -1.63
SMG8-202ENST00000543872 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
SMG8-202ENST00000543872 MT1XP80297 61 aa4.8□□□□□ -1.64
SMG8-202ENST00000543872 MT2AP02795 61 aa4.8□□□□□ -1.64
SMG8-202ENST00000543872 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
SMG8-202ENST00000543872 MT1HP80294 61 aa4.74□□□□□ -1.65
SMG8-202ENST00000543872 MT1BP07438 61 aa4.73□□□□□ -1.65
SMG8-202ENST00000543872 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
SMG8-202ENST00000543872 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SMG8-202ENST00000543872 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SMG8-202ENST00000543872 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
SMG8-202ENST00000543872 KMT2DO14686 5537 aa4.6□□□□□ -1.67
SMG8-202ENST00000543872 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
SMG8-202ENST00000543872 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
SMG8-202ENST00000543872 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
SMG8-202ENST00000543872 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
SMG8-202ENST00000543872 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
SMG8-202ENST00000543872 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
SMG8-202ENST00000543872 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
SMG8-202ENST00000543872 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
SMG8-202ENST00000543872 USH2AO75445 5202 aa4.44□□□□□ -1.7
SMG8-202ENST00000543872 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
SMG8-202ENST00000543872 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
SMG8-202ENST00000543872 LCE2BO14633 110 aa4.27□□□□□ -1.73
SMG8-202ENST00000543872 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
SMG8-202ENST00000543872 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
SMG8-202ENST00000543872 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
SMG8-202ENST00000543872 MT1LQ93083 61 aa4.18□□□□□ -1.74
SMG8-202ENST00000543872 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
SMG8-202ENST00000543872 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 562.1 ms