RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 STARD9Q9P2P6 4700 aa8.59□□□□□ -1.03
PHC1-212ENST00000543824 DNAH8Q96JB1 4490 aa8.5□□□□□ -1.05
PHC1-212ENST00000543824 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
PHC1-212ENST00000543824 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
PHC1-212ENST00000543824 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
PHC1-212ENST00000543824 CMYA5Q8N3K9 4069 aa8.4□□□□□ -1.06
PHC1-212ENST00000543824 ALMS1Q8TCU4 4167 aa8.4□□□□□ -1.06
PHC1-212ENST00000543824 LRP1BQ9NZR2 4599 aa8.38□□□□□ -1.07
PHC1-212ENST00000543824 DNAH7Q8WXX0 4024 aa8.37□□□□□ -1.07
PHC1-212ENST00000543824 FAT1Q14517 4588 aa8.35□□□□□ -1.07
PHC1-212ENST00000543824 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
PHC1-212ENST00000543824 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
PHC1-212ENST00000543824 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
PHC1-212ENST00000543824 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
PHC1-212ENST00000543824 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
PHC1-212ENST00000543824 FRAS1Q86XX4 4008 aa8.28□□□□□ -1.08
PHC1-212ENST00000543824 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
PHC1-212ENST00000543824 DNAH3Q8TD57 4116 aa8.24□□□□□ -1.09
PHC1-212ENST00000543824 DNAH6Q9C0G6 4158 aa8.15□□□□□ -1.11
PHC1-212ENST00000543824 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
PHC1-212ENST00000543824 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
PHC1-212ENST00000543824 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
PHC1-212ENST00000543824 HYDINQ4G0P3 5121 aa8.03□□□□□ -1.12
PHC1-212ENST00000543824 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
PHC1-212ENST00000543824 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
PHC1-212ENST00000543824 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
PHC1-212ENST00000543824 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
PHC1-212ENST00000543824 HECTD4Q9Y4D8 3996 aa7.95□□□□□ -1.14
PHC1-212ENST00000543824 RYR1P21817 5038 aa7.9□□□□□ -1.14
PHC1-212ENST00000543824 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.14
PHC1-212ENST00000543824 SACSQ9NZJ4 4579 aa7.9□□□□□ -1.14
PHC1-212ENST00000543824 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.14
PHC1-212ENST00000543824 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
PHC1-212ENST00000543824 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
PHC1-212ENST00000543824 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
PHC1-212ENST00000543824 RYR3Q15413 4870 aa7.82□□□□□ -1.16
PHC1-212ENST00000543824 INE1O15225 51 aa7.81□□□□□ -1.16
PHC1-212ENST00000543824 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
PHC1-212ENST00000543824 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
PHC1-212ENST00000543824 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
PHC1-212ENST00000543824 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
PHC1-212ENST00000543824 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
PHC1-212ENST00000543824 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
PHC1-212ENST00000543824 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
PHC1-212ENST00000543824 RYR2Q92736 4967 aa7.58□□□□□ -1.2
PHC1-212ENST00000543824 PKD1P98161 4303 aa7.51□□□□□ -1.21
PHC1-212ENST00000543824 LRP2P98164 4655 aa7.5□□□□□ -1.21
PHC1-212ENST00000543824 HSPG2P98160 4391 aa7.36□□□□□ -1.23
PHC1-212ENST00000543824 HERC2O95714 4834 aa7.34□□□□□ -1.23
PHC1-212ENST00000543824 EPPK1P58107 5090 aaKnown RBP7.32□□□□□ -1.24
PHC1-212ENST00000543824 LPAP08519 4548 aa7.27□□□□□ -1.25
PHC1-212ENST00000543824 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
PHC1-212ENST00000543824 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
PHC1-212ENST00000543824 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
PHC1-212ENST00000543824 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
PHC1-212ENST00000543824 MT2AP02795 61 aa7.08□□□□□ -1.28
PHC1-212ENST00000543824 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
PHC1-212ENST00000543824 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
PHC1-212ENST00000543824 MT1FP04733 61 aa7.05□□□□□ -1.28
PHC1-212ENST00000543824 MT1HP80294 61 aa7.04□□□□□ -1.28
PHC1-212ENST00000543824 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
PHC1-212ENST00000543824 MUC2Q02817 5179 aa6.99□□□□□ -1.29
PHC1-212ENST00000543824 TNXBP22105 4242 aa6.97□□□□□ -1.29
PHC1-212ENST00000543824 HERC1Q15751 4861 aa6.91□□□□□ -1.3
PHC1-212ENST00000543824 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
PHC1-212ENST00000543824 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
PHC1-212ENST00000543824 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
PHC1-212ENST00000543824 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PHC1-212ENST00000543824 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
PHC1-212ENST00000543824 LCE3CQ5T5A8 94 aa6.83□□□□□ -1.32
PHC1-212ENST00000543824 KRTAP10-7P60409 375 aaPredicted RBP6.82□□□□□ -1.32
PHC1-212ENST00000543824 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
PHC1-212ENST00000543824 MT1XP80297 61 aa6.73□□□□□ -1.33
PHC1-212ENST00000543824 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
PHC1-212ENST00000543824 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
PHC1-212ENST00000543824 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
PHC1-212ENST00000543824 UBR4Q5T4S7 5183 aa6.66□□□□□ -1.34
PHC1-212ENST00000543824 MT1BP07438 61 aa6.64□□□□□ -1.35
PHC1-212ENST00000543824 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
PHC1-212ENST00000543824 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
PHC1-212ENST00000543824 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
PHC1-212ENST00000543824 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
PHC1-212ENST00000543824 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.37
PHC1-212ENST00000543824 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.37
PHC1-212ENST00000543824 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
PHC1-212ENST00000543824 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
PHC1-212ENST00000543824 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
PHC1-212ENST00000543824 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
PHC1-212ENST00000543824 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
PHC1-212ENST00000543824 MT1GP13640 62 aa6.18□□□□□ -1.42
PHC1-212ENST00000543824 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
PHC1-212ENST00000543824 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
PHC1-212ENST00000543824 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
PHC1-212ENST00000543824 LCE2BO14633 110 aa6.06□□□□□ -1.44
PHC1-212ENST00000543824 USH2AO75445 5202 aa6.04□□□□□ -1.44
PHC1-212ENST00000543824 MT1LQ93083 61 aa5.99□□□□□ -1.45
PHC1-212ENST00000543824 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
PHC1-212ENST00000543824 MT1EP04732 61 aa5.91□□□□□ -1.46
PHC1-212ENST00000543824 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
PHC1-212ENST00000543824 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms