RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 P0C880 135 aa4.21□□□□□ -1.73
PRKAB1-207ENST00000542698 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
PRKAB1-207ENST00000542698 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
PRKAB1-207ENST00000542698 DNAH6Q9C0G6 4158 aa4.19□□□□□ -1.74
PRKAB1-207ENST00000542698 KRTAP10-8P60410 259 aa4.18□□□□□ -1.74
PRKAB1-207ENST00000542698 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
PRKAB1-207ENST00000542698 M0R2T5 61 aa4.18□□□□□ -1.74
PRKAB1-207ENST00000542698 DNAH11Q96DT5 4516 aa4.17□□□□□ -1.74
PRKAB1-207ENST00000542698 ALMS1Q8TCU4 4167 aa4.17□□□□□ -1.74
PRKAB1-207ENST00000542698 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.74
PRKAB1-207ENST00000542698 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
PRKAB1-207ENST00000542698 LCE2BO14633 110 aa4.13□□□□□ -1.75
PRKAB1-207ENST00000542698 RYR3Q15413 4870 aa4.11□□□□□ -1.75
PRKAB1-207ENST00000542698 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
PRKAB1-207ENST00000542698 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
PRKAB1-207ENST00000542698 PKD1P98161 4303 aa4.09□□□□□ -1.75
PRKAB1-207ENST00000542698 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
PRKAB1-207ENST00000542698 HYDINQ4G0P3 5121 aa4.08□□□□□ -1.76
PRKAB1-207ENST00000542698 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
PRKAB1-207ENST00000542698 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
PRKAB1-207ENST00000542698 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
PRKAB1-207ENST00000542698 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
PRKAB1-207ENST00000542698 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
PRKAB1-207ENST00000542698 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
PRKAB1-207ENST00000542698 HERC2O95714 4834 aa4.03□□□□□ -1.76
PRKAB1-207ENST00000542698 TNP1P09430 55 aa4.02□□□□□ -1.77
PRKAB1-207ENST00000542698 RYR2Q92736 4967 aa4.02□□□□□ -1.77
PRKAB1-207ENST00000542698 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
PRKAB1-207ENST00000542698 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
PRKAB1-207ENST00000542698 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
PRKAB1-207ENST00000542698 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
PRKAB1-207ENST00000542698 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
PRKAB1-207ENST00000542698 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
PRKAB1-207ENST00000542698 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
PRKAB1-207ENST00000542698 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
PRKAB1-207ENST00000542698 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
PRKAB1-207ENST00000542698 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
PRKAB1-207ENST00000542698 FAT1Q14517 4588 aa3.91□□□□□ -1.78
PRKAB1-207ENST00000542698 APOBP04114 4563 aaKnown RBP3.88□□□□□ -1.79
PRKAB1-207ENST00000542698 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
PRKAB1-207ENST00000542698 KRTAP4-5Q9BYR2 181 aa3.86□□□□□ -1.79
PRKAB1-207ENST00000542698 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
PRKAB1-207ENST00000542698 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
PRKAB1-207ENST00000542698 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
PRKAB1-207ENST00000542698 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
PRKAB1-207ENST00000542698 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
PRKAB1-207ENST00000542698 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
PRKAB1-207ENST00000542698 RYR1P21817 5038 aa3.78□□□□□ -1.8
PRKAB1-207ENST00000542698 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
PRKAB1-207ENST00000542698 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
PRKAB1-207ENST00000542698 TNXBP22105 4242 aa3.75□□□□□ -1.81
PRKAB1-207ENST00000542698 FAT3Q8TDW7 4589 aa3.75□□□□□ -1.81
PRKAB1-207ENST00000542698 HSPG2P98160 4391 aa3.72□□□□□ -1.81
PRKAB1-207ENST00000542698 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
PRKAB1-207ENST00000542698 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
PRKAB1-207ENST00000542698 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
PRKAB1-207ENST00000542698 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
PRKAB1-207ENST00000542698 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
PRKAB1-207ENST00000542698 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
PRKAB1-207ENST00000542698 LPAP08519 4548 aa3.55□□□□□ -1.84
PRKAB1-207ENST00000542698 LRP2P98164 4655 aa3.54□□□□□ -1.84
PRKAB1-207ENST00000542698 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
PRKAB1-207ENST00000542698 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
PRKAB1-207ENST00000542698 HERC1Q15751 4861 aa3.43□□□□□ -1.86
PRKAB1-207ENST00000542698 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
PRKAB1-207ENST00000542698 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
PRKAB1-207ENST00000542698 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
PRKAB1-207ENST00000542698 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
PRKAB1-207ENST00000542698 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
PRKAB1-207ENST00000542698 INE1O15225 51 aa3.36□□□□□ -1.87
PRKAB1-207ENST00000542698 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
PRKAB1-207ENST00000542698 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
PRKAB1-207ENST00000542698 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
PRKAB1-207ENST00000542698 MT1HP80294 61 aa3.31□□□□□ -1.88
PRKAB1-207ENST00000542698 MT2AP02795 61 aa3.29□□□□□ -1.88
PRKAB1-207ENST00000542698 MUC2Q02817 5179 aa3.28□□□□□ -1.88
PRKAB1-207ENST00000542698 MT1FP04733 61 aa3.26□□□□□ -1.89
PRKAB1-207ENST00000542698 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
PRKAB1-207ENST00000542698 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
PRKAB1-207ENST00000542698 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
PRKAB1-207ENST00000542698 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
PRKAB1-207ENST00000542698 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
PRKAB1-207ENST00000542698 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
PRKAB1-207ENST00000542698 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
PRKAB1-207ENST00000542698 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
PRKAB1-207ENST00000542698 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
PRKAB1-207ENST00000542698 MT1XP80297 61 aa3.09□□□□□ -1.91
PRKAB1-207ENST00000542698 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
PRKAB1-207ENST00000542698 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.92
PRKAB1-207ENST00000542698 MT1BP07438 61 aa3.08□□□□□ -1.92
PRKAB1-207ENST00000542698 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
PRKAB1-207ENST00000542698 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
PRKAB1-207ENST00000542698 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
PRKAB1-207ENST00000542698 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
PRKAB1-207ENST00000542698 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
PRKAB1-207ENST00000542698 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
PRKAB1-207ENST00000542698 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
PRKAB1-207ENST00000542698 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
PRKAB1-207ENST00000542698 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
PRKAB1-207ENST00000542698 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms