RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
AC009509.3-201ENST00000542428 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
AC009509.3-201ENST00000542428 M0R2T5 61 aa5.15□□□□□ -1.59
AC009509.3-201ENST00000542428 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
AC009509.3-201ENST00000542428 C5orf47Q569G3 176 aa5.14□□□□□ -1.59
AC009509.3-201ENST00000542428 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
AC009509.3-201ENST00000542428 SMIM20Q8N5G0 67 aa5.13□□□□□ -1.59
AC009509.3-201ENST00000542428 H3BPC8 53 aa5.12□□□□□ -1.59
AC009509.3-201ENST00000542428 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
AC009509.3-201ENST00000542428 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
AC009509.3-201ENST00000542428 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
AC009509.3-201ENST00000542428 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
AC009509.3-201ENST00000542428 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
AC009509.3-201ENST00000542428 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
AC009509.3-201ENST00000542428 S4R3F8 94 aa5.04□□□□□ -1.6
AC009509.3-201ENST00000542428 C20orf197Q8N268 126 aa5.03□□□□□ -1.6
AC009509.3-201ENST00000542428 LCA10Q71F78 164 aa5.02□□□□□ -1.61
AC009509.3-201ENST00000542428 COX7CP15954 63 aa5□□□□□ -1.61
AC009509.3-201ENST00000542428 A8MUN3 132 aa4.99□□□□□ -1.61
AC009509.3-201ENST00000542428 MT2AP02795 61 aa4.99□□□□□ -1.61
AC009509.3-201ENST00000542428 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
AC009509.3-201ENST00000542428 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
AC009509.3-201ENST00000542428 MT1FP04733 61 aa4.96□□□□□ -1.62
AC009509.3-201ENST00000542428 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
AC009509.3-201ENST00000542428 SPANXA2-OT1Q8N9U9 137 aa4.91□□□□□ -1.62
AC009509.3-201ENST00000542428 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
AC009509.3-201ENST00000542428 H7BZZ5 65 aa4.88□□□□□ -1.63
AC009509.3-201ENST00000542428 NDUFC1O43677 76 aa4.88□□□□□ -1.63
AC009509.3-201ENST00000542428 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
AC009509.3-201ENST00000542428 CCDC179H3BU77 68 aa4.87□□□□□ -1.63
AC009509.3-201ENST00000542428 ACYP2P14621 99 aa4.85□□□□□ -1.63
AC009509.3-201ENST00000542428 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
AC009509.3-201ENST00000542428 H0YAA0 97 aa4.8□□□□□ -1.64
AC009509.3-201ENST00000542428 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
AC009509.3-201ENST00000542428 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
AC009509.3-201ENST00000542428 COA5Q86WW8 74 aa4.78□□□□□ -1.64
AC009509.3-201ENST00000542428 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
AC009509.3-201ENST00000542428 USH2AO75445 5202 aa4.76□□□□□ -1.65
AC009509.3-201ENST00000542428 SPTSSBQ8NFR3 76 aa4.74□□□□□ -1.65
AC009509.3-201ENST00000542428 P0C880 135 aa4.71□□□□□ -1.66
AC009509.3-201ENST00000542428 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
AC009509.3-201ENST00000542428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
AC009509.3-201ENST00000542428 TMEM258P61165 79 aa4.7□□□□□ -1.66
AC009509.3-201ENST00000542428 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
AC009509.3-201ENST00000542428 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
AC009509.3-201ENST00000542428 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
AC009509.3-201ENST00000542428 CRIPTQ9P021 101 aa4.67□□□□□ -1.66
AC009509.3-201ENST00000542428 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
AC009509.3-201ENST00000542428 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
AC009509.3-201ENST00000542428 MT1BP07438 61 aa4.63□□□□□ -1.67
AC009509.3-201ENST00000542428 M0QZ58 72 aa4.61□□□□□ -1.67
AC009509.3-201ENST00000542428 R4GN34 69 aa4.61□□□□□ -1.67
AC009509.3-201ENST00000542428 PCP4P48539 62 aa4.6□□□□□ -1.67
AC009509.3-201ENST00000542428 Q5VV11 94 aa4.6□□□□□ -1.67
AC009509.3-201ENST00000542428 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
AC009509.3-201ENST00000542428 SEC61GP60059 68 aa4.53□□□□□ -1.68
AC009509.3-201ENST00000542428 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
AC009509.3-201ENST00000542428 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
AC009509.3-201ENST00000542428 A0A1B0GU69 56 aa4.51□□□□□ -1.69
AC009509.3-201ENST00000542428 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
AC009509.3-201ENST00000542428 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
AC009509.3-201ENST00000542428 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
AC009509.3-201ENST00000542428 A0A1B0GU33 70 aa4.44□□□□□ -1.7
AC009509.3-201ENST00000542428 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
AC009509.3-201ENST00000542428 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
AC009509.3-201ENST00000542428 A6NN06 94 aa4.43□□□□□ -1.7
AC009509.3-201ENST00000542428 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
AC009509.3-201ENST00000542428 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
AC009509.3-201ENST00000542428 MT1XP80297 61 aa4.39□□□□□ -1.71
AC009509.3-201ENST00000542428 A0A0D9SG42 100 aa4.38□□□□□ -1.71
AC009509.3-201ENST00000542428 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
AC009509.3-201ENST00000542428 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
AC009509.3-201ENST00000542428 A8MU10 97 aa4.34□□□□□ -1.71
AC009509.3-201ENST00000542428 Q1T7F1 81 aa4.34□□□□□ -1.71
AC009509.3-201ENST00000542428 V9GYY9 64 aa4.34□□□□□ -1.71
AC009509.3-201ENST00000542428 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
AC009509.3-201ENST00000542428 PSPHP1O15172 72 aa4.32□□□□□ -1.72
AC009509.3-201ENST00000542428 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
AC009509.3-201ENST00000542428 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
AC009509.3-201ENST00000542428 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
AC009509.3-201ENST00000542428 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
AC009509.3-201ENST00000542428 UQCR11O14957 56 aa4.29□□□□□ -1.72
AC009509.3-201ENST00000542428 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
AC009509.3-201ENST00000542428 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
AC009509.3-201ENST00000542428 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
AC009509.3-201ENST00000542428 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
AC009509.3-201ENST00000542428 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
AC009509.3-201ENST00000542428 A6NED7 52 aa4.17□□□□□ -1.74
AC009509.3-201ENST00000542428 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
AC009509.3-201ENST00000542428 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
AC009509.3-201ENST00000542428 KMT2DO14686 5537 aa4.15□□□□□ -1.74
AC009509.3-201ENST00000542428 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
AC009509.3-201ENST00000542428 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
AC009509.3-201ENST00000542428 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
AC009509.3-201ENST00000542428 K7ERS5 55 aa4.06□□□□□ -1.76
AC009509.3-201ENST00000542428 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
AC009509.3-201ENST00000542428 H3BS24 57 aa4.05□□□□□ -1.76
AC009509.3-201ENST00000542428 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
AC009509.3-201ENST00000542428 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
AC009509.3-201ENST00000542428 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms