RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
AC009509.3-201ENST00000542428 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
AC009509.3-201ENST00000542428 ABCC9O60706 1549 aa21.56■■□□□ 1.04
AC009509.3-201ENST00000542428 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
AC009509.3-201ENST00000542428 NACADO15069 1562 aa20.96■□□□□ 0.95
AC009509.3-201ENST00000542428 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
AC009509.3-201ENST00000542428 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
AC009509.3-201ENST00000542428 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
AC009509.3-201ENST00000542428 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
AC009509.3-201ENST00000542428 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
AC009509.3-201ENST00000542428 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
AC009509.3-201ENST00000542428 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
AC009509.3-201ENST00000542428 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
AC009509.3-201ENST00000542428 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
AC009509.3-201ENST00000542428 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
AC009509.3-201ENST00000542428 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
AC009509.3-201ENST00000542428 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
AC009509.3-201ENST00000542428 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
AC009509.3-201ENST00000542428 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
AC009509.3-201ENST00000542428 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
AC009509.3-201ENST00000542428 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
AC009509.3-201ENST00000542428 WIZO95785 1651 aa19.42■□□□□ 0.7
AC009509.3-201ENST00000542428 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
AC009509.3-201ENST00000542428 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
AC009509.3-201ENST00000542428 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
AC009509.3-201ENST00000542428 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
AC009509.3-201ENST00000542428 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
AC009509.3-201ENST00000542428 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
AC009509.3-201ENST00000542428 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
AC009509.3-201ENST00000542428 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
AC009509.3-201ENST00000542428 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
AC009509.3-201ENST00000542428 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
AC009509.3-201ENST00000542428 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
AC009509.3-201ENST00000542428 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
AC009509.3-201ENST00000542428 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
AC009509.3-201ENST00000542428 NESP48681 1621 aa18.78■□□□□ 0.6
AC009509.3-201ENST00000542428 CFTRP13569 1480 aa18.66■□□□□ 0.58
AC009509.3-201ENST00000542428 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
AC009509.3-201ENST00000542428 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
AC009509.3-201ENST00000542428 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
AC009509.3-201ENST00000542428 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
AC009509.3-201ENST00000542428 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.55
AC009509.3-201ENST00000542428 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
AC009509.3-201ENST00000542428 WDR62O43379 1518 aa18.44■□□□□ 0.54
AC009509.3-201ENST00000542428 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
AC009509.3-201ENST00000542428 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
AC009509.3-201ENST00000542428 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
AC009509.3-201ENST00000542428 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
AC009509.3-201ENST00000542428 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
AC009509.3-201ENST00000542428 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
AC009509.3-201ENST00000542428 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
AC009509.3-201ENST00000542428 CUX1P39880 1505 aa18.29■□□□□ 0.52
AC009509.3-201ENST00000542428 CUX2O14529 1486 aa18.27■□□□□ 0.52
AC009509.3-201ENST00000542428 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
AC009509.3-201ENST00000542428 TOP2BQ02880 1626 aa18.27■□□□□ 0.51
AC009509.3-201ENST00000542428 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
AC009509.3-201ENST00000542428 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
AC009509.3-201ENST00000542428 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
AC009509.3-201ENST00000542428 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
AC009509.3-201ENST00000542428 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
AC009509.3-201ENST00000542428 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
AC009509.3-201ENST00000542428 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
AC009509.3-201ENST00000542428 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
AC009509.3-201ENST00000542428 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
AC009509.3-201ENST00000542428 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
AC009509.3-201ENST00000542428 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
AC009509.3-201ENST00000542428 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
AC009509.3-201ENST00000542428 SOGA1O94964 1423 aa17.95■□□□□ 0.46
AC009509.3-201ENST00000542428 CHD1O14646 1710 aa17.9■□□□□ 0.46
AC009509.3-201ENST00000542428 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
AC009509.3-201ENST00000542428 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
AC009509.3-201ENST00000542428 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
AC009509.3-201ENST00000542428 CUL7Q14999 1698 aa17.82■□□□□ 0.44
AC009509.3-201ENST00000542428 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
AC009509.3-201ENST00000542428 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
AC009509.3-201ENST00000542428 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
AC009509.3-201ENST00000542428 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
AC009509.3-201ENST00000542428 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
AC009509.3-201ENST00000542428 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
AC009509.3-201ENST00000542428 TRIM41Q8WV44 630 aa17.75■□□□□ 0.43
AC009509.3-201ENST00000542428 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
AC009509.3-201ENST00000542428 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
AC009509.3-201ENST00000542428 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
AC009509.3-201ENST00000542428 CTTNBP2Q8WZ74 1663 aa17.66■□□□□ 0.42
AC009509.3-201ENST00000542428 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
AC009509.3-201ENST00000542428 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
AC009509.3-201ENST00000542428 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
AC009509.3-201ENST00000542428 EEA1Q15075 1411 aa17.61■□□□□ 0.41
AC009509.3-201ENST00000542428 KIF21BO75037 1637 aa17.6■□□□□ 0.41
AC009509.3-201ENST00000542428 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
AC009509.3-201ENST00000542428 IGF1RP08069 1367 aa17.54■□□□□ 0.4
AC009509.3-201ENST00000542428 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
AC009509.3-201ENST00000542428 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
AC009509.3-201ENST00000542428 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
AC009509.3-201ENST00000542428 NUP160Q12769 1436 aa17.49■□□□□ 0.39
AC009509.3-201ENST00000542428 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
AC009509.3-201ENST00000542428 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
AC009509.3-201ENST00000542428 FBLN2P98095 1184 aa17.43■□□□□ 0.38
AC009509.3-201ENST00000542428 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
AC009509.3-201ENST00000542428 FAM9AQ8IZU1 332 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms