RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 RPL37P61927 97 aaKnown RBP8.87□□□□□ -0.99
PDCD2-208ENST00000541970 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
PDCD2-208ENST00000541970 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
PDCD2-208ENST00000541970 MYCBP2O75592 4640 aa8.83□□□□□ -1
PDCD2-208ENST00000541970 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
PDCD2-208ENST00000541970 C20orf166-AS1Q96NR2 134 aa8.76□□□□□ -1.01
PDCD2-208ENST00000541970 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
PDCD2-208ENST00000541970 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PDCD2-208ENST00000541970 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
PDCD2-208ENST00000541970 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
PDCD2-208ENST00000541970 RYR2Q92736 4967 aa8.69□□□□□ -1.02
PDCD2-208ENST00000541970 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
PDCD2-208ENST00000541970 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
PDCD2-208ENST00000541970 RYR3Q15413 4870 aa8.6□□□□□ -1.03
PDCD2-208ENST00000541970 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
PDCD2-208ENST00000541970 S4R3F8 94 aa8.58□□□□□ -1.04
PDCD2-208ENST00000541970 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
PDCD2-208ENST00000541970 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
PDCD2-208ENST00000541970 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
PDCD2-208ENST00000541970 XP32Q5T750 250 aa8.53□□□□□ -1.04
PDCD2-208ENST00000541970 RYR1P21817 5038 aa8.52□□□□□ -1.05
PDCD2-208ENST00000541970 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.05
PDCD2-208ENST00000541970 J3QL48 77 aa8.46□□□□□ -1.06
PDCD2-208ENST00000541970 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
PDCD2-208ENST00000541970 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
PDCD2-208ENST00000541970 HSPG2P98160 4391 aa8.42□□□□□ -1.06
PDCD2-208ENST00000541970 PKHD1L1Q86WI1 4243 aa8.41□□□□□ -1.06
PDCD2-208ENST00000541970 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
PDCD2-208ENST00000541970 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
PDCD2-208ENST00000541970 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
PDCD2-208ENST00000541970 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
PDCD2-208ENST00000541970 LRP2P98164 4655 aa8.32□□□□□ -1.08
PDCD2-208ENST00000541970 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
PDCD2-208ENST00000541970 LPAP08519 4548 aa8.24□□□□□ -1.09
PDCD2-208ENST00000541970 TNXBP22105 4242 aa8.22□□□□□ -1.09
PDCD2-208ENST00000541970 M0QZ58 72 aa8.16□□□□□ -1.1
PDCD2-208ENST00000541970 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
PDCD2-208ENST00000541970 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
PDCD2-208ENST00000541970 R4GN34 69 aa8.08□□□□□ -1.12
PDCD2-208ENST00000541970 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
PDCD2-208ENST00000541970 HERC2O95714 4834 aa8□□□□□ -1.13
PDCD2-208ENST00000541970 MUC2Q02817 5179 aa7.94□□□□□ -1.14
PDCD2-208ENST00000541970 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
PDCD2-208ENST00000541970 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
PDCD2-208ENST00000541970 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
PDCD2-208ENST00000541970 M0R2T5 61 aa7.74□□□□□ -1.17
PDCD2-208ENST00000541970 HERC1Q15751 4861 aa7.74□□□□□ -1.17
PDCD2-208ENST00000541970 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
PDCD2-208ENST00000541970 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
PDCD2-208ENST00000541970 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
PDCD2-208ENST00000541970 PCLOQ9Y6V0 5065 aa7.55□□□□□ -1.2
PDCD2-208ENST00000541970 BIRC6Q9NR09 4857 aa7.54□□□□□ -1.2
PDCD2-208ENST00000541970 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
PDCD2-208ENST00000541970 TNP1P09430 55 aa7.41□□□□□ -1.22
PDCD2-208ENST00000541970 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
PDCD2-208ENST00000541970 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
PDCD2-208ENST00000541970 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
PDCD2-208ENST00000541970 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
PDCD2-208ENST00000541970 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
PDCD2-208ENST00000541970 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
PDCD2-208ENST00000541970 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
PDCD2-208ENST00000541970 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
PDCD2-208ENST00000541970 MT1HP80294 61 aa7.04□□□□□ -1.28
PDCD2-208ENST00000541970 MT1FP04733 61 aa6.95□□□□□ -1.3
PDCD2-208ENST00000541970 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PDCD2-208ENST00000541970 MT2AP02795 61 aa6.91□□□□□ -1.3
PDCD2-208ENST00000541970 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
PDCD2-208ENST00000541970 KRTAP19-1Q8IUB9 90 aa6.89□□□□□ -1.31
PDCD2-208ENST00000541970 INE1O15225 51 aa6.81□□□□□ -1.32
PDCD2-208ENST00000541970 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
PDCD2-208ENST00000541970 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
PDCD2-208ENST00000541970 USH2AO75445 5202 aa6.73□□□□□ -1.33
PDCD2-208ENST00000541970 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
PDCD2-208ENST00000541970 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
PDCD2-208ENST00000541970 MT1BP07438 61 aa6.55□□□□□ -1.36
PDCD2-208ENST00000541970 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
PDCD2-208ENST00000541970 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
PDCD2-208ENST00000541970 KMT2DO14686 5537 aa6.49□□□□□ -1.37
PDCD2-208ENST00000541970 MT1XP80297 61 aa6.48□□□□□ -1.37
PDCD2-208ENST00000541970 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
PDCD2-208ENST00000541970 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.37
PDCD2-208ENST00000541970 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
PDCD2-208ENST00000541970 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
PDCD2-208ENST00000541970 LCE2BO14633 110 aa6.36□□□□□ -1.39
PDCD2-208ENST00000541970 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
PDCD2-208ENST00000541970 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
PDCD2-208ENST00000541970 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
PDCD2-208ENST00000541970 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
PDCD2-208ENST00000541970 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
PDCD2-208ENST00000541970 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
PDCD2-208ENST00000541970 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
PDCD2-208ENST00000541970 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
PDCD2-208ENST00000541970 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
PDCD2-208ENST00000541970 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
PDCD2-208ENST00000541970 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
PDCD2-208ENST00000541970 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
PDCD2-208ENST00000541970 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
PDCD2-208ENST00000541970 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
PDCD2-208ENST00000541970 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
PDCD2-208ENST00000541970 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms