RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 H0YAA0 97 aa7.92□□□□□ -1.14
VARS2-211ENST00000541562 A0A1B0GU33 70 aa7.91□□□□□ -1.14
VARS2-211ENST00000541562 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
VARS2-211ENST00000541562 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
VARS2-211ENST00000541562 KRTAP21-3Q3LHN1 58 aa7.87□□□□□ -1.15
VARS2-211ENST00000541562 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
VARS2-211ENST00000541562 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
VARS2-211ENST00000541562 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
VARS2-211ENST00000541562 TNXBP22105 4242 aa7.78□□□□□ -1.16
VARS2-211ENST00000541562 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
VARS2-211ENST00000541562 XP32Q5T750 250 aa7.77□□□□□ -1.17
VARS2-211ENST00000541562 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
VARS2-211ENST00000541562 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
VARS2-211ENST00000541562 P0C880 135 aa7.71□□□□□ -1.18
VARS2-211ENST00000541562 MUC2Q02817 5179 aa7.7□□□□□ -1.18
VARS2-211ENST00000541562 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
VARS2-211ENST00000541562 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
VARS2-211ENST00000541562 S4R3F8 94 aa7.66□□□□□ -1.18
VARS2-211ENST00000541562 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
VARS2-211ENST00000541562 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
VARS2-211ENST00000541562 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
VARS2-211ENST00000541562 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
VARS2-211ENST00000541562 K7ERS5 55 aa7.6□□□□□ -1.19
VARS2-211ENST00000541562 MT1HL1P0DM35 61 aa7.59□□□□□ -1.2
VARS2-211ENST00000541562 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
VARS2-211ENST00000541562 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
VARS2-211ENST00000541562 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
VARS2-211ENST00000541562 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
VARS2-211ENST00000541562 J3QL48 77 aa7.43□□□□□ -1.22
VARS2-211ENST00000541562 HERC2O95714 4834 aa7.41□□□□□ -1.22
VARS2-211ENST00000541562 ROMO1P60602 79 aa7.38□□□□□ -1.23
VARS2-211ENST00000541562 M0QZ58 72 aa7.34□□□□□ -1.23
VARS2-211ENST00000541562 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
VARS2-211ENST00000541562 HERC1Q15751 4861 aa7.33□□□□□ -1.24
VARS2-211ENST00000541562 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
VARS2-211ENST00000541562 FAT4Q6V0I7 4981 aa7.27□□□□□ -1.25
VARS2-211ENST00000541562 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
VARS2-211ENST00000541562 R4GN34 69 aa7.27□□□□□ -1.25
VARS2-211ENST00000541562 RNF213Q63HN8 5207 aa7.26□□□□□ -1.25
VARS2-211ENST00000541562 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
VARS2-211ENST00000541562 H3BS24 57 aa7.22□□□□□ -1.25
VARS2-211ENST00000541562 PCLOQ9Y6V0 5065 aa7.1□□□□□ -1.27
VARS2-211ENST00000541562 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
VARS2-211ENST00000541562 MUC17Q685J3 4493 aa7.06□□□□□ -1.28
VARS2-211ENST00000541562 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
VARS2-211ENST00000541562 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
VARS2-211ENST00000541562 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
VARS2-211ENST00000541562 M0R2T5 61 aa6.9□□□□□ -1.31
VARS2-211ENST00000541562 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
VARS2-211ENST00000541562 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
VARS2-211ENST00000541562 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
VARS2-211ENST00000541562 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.33
VARS2-211ENST00000541562 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
VARS2-211ENST00000541562 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
VARS2-211ENST00000541562 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
VARS2-211ENST00000541562 USH2AO75445 5202 aa6.53□□□□□ -1.36
VARS2-211ENST00000541562 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
VARS2-211ENST00000541562 TNP1P09430 55 aa6.47□□□□□ -1.37
VARS2-211ENST00000541562 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
VARS2-211ENST00000541562 MT1HP80294 61 aa6.38□□□□□ -1.39
VARS2-211ENST00000541562 KMT2DO14686 5537 aa6.38□□□□□ -1.39
VARS2-211ENST00000541562 MT1FP04733 61 aa6.37□□□□□ -1.39
VARS2-211ENST00000541562 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
VARS2-211ENST00000541562 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
VARS2-211ENST00000541562 MT2AP02795 61 aa6.29□□□□□ -1.4
VARS2-211ENST00000541562 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
VARS2-211ENST00000541562 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
VARS2-211ENST00000541562 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
VARS2-211ENST00000541562 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
VARS2-211ENST00000541562 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
VARS2-211ENST00000541562 MT1BP07438 61 aa6.02□□□□□ -1.45
VARS2-211ENST00000541562 MT1XP80297 61 aa5.98□□□□□ -1.45
VARS2-211ENST00000541562 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
VARS2-211ENST00000541562 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
VARS2-211ENST00000541562 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
VARS2-211ENST00000541562 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
VARS2-211ENST00000541562 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
VARS2-211ENST00000541562 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
VARS2-211ENST00000541562 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
VARS2-211ENST00000541562 LCE2BO14633 110 aa5.83□□□□□ -1.48
VARS2-211ENST00000541562 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
VARS2-211ENST00000541562 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
VARS2-211ENST00000541562 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
VARS2-211ENST00000541562 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
VARS2-211ENST00000541562 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
VARS2-211ENST00000541562 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
VARS2-211ENST00000541562 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
VARS2-211ENST00000541562 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
VARS2-211ENST00000541562 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
VARS2-211ENST00000541562 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
VARS2-211ENST00000541562 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
VARS2-211ENST00000541562 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
VARS2-211ENST00000541562 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
VARS2-211ENST00000541562 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.53
VARS2-211ENST00000541562 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
VARS2-211ENST00000541562 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
VARS2-211ENST00000541562 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
VARS2-211ENST00000541562 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
VARS2-211ENST00000541562 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
VARS2-211ENST00000541562 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms