RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 EPPK1P58107 5090 aaKnown RBP10.9□□□□□ -0.66
LSM14A-202ENST00000540746 SEC61GP60059 68 aa10.89□□□□□ -0.67
LSM14A-202ENST00000540746 H0YAA0 97 aa10.74□□□□□ -0.69
LSM14A-202ENST00000540746 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
LSM14A-202ENST00000540746 A0A1B0GU33 70 aa10.69□□□□□ -0.7
LSM14A-202ENST00000540746 LPAP08519 4548 aa10.68□□□□□ -0.7
LSM14A-202ENST00000540746 LRP2P98164 4655 aa10.68□□□□□ -0.7
LSM14A-202ENST00000540746 H1FX-AS1Q4G0G2 97 aa10.67□□□□□ -0.7
LSM14A-202ENST00000540746 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
LSM14A-202ENST00000540746 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
LSM14A-202ENST00000540746 TPRXLQ17RH7 258 aa10.59□□□□□ -0.71
LSM14A-202ENST00000540746 ADM2Q7Z4H4 148 aa10.59□□□□□ -0.71
LSM14A-202ENST00000540746 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
LSM14A-202ENST00000540746 S4R3F8 94 aa10.56□□□□□ -0.72
LSM14A-202ENST00000540746 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
LSM14A-202ENST00000540746 KRTAP10-6P60371 365 aaPredicted RBP10.53□□□□□ -0.72
LSM14A-202ENST00000540746 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
LSM14A-202ENST00000540746 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
LSM14A-202ENST00000540746 P0C880 135 aa10.35□□□□□ -0.75
LSM14A-202ENST00000540746 HERC2O95714 4834 aa10.28□□□□□ -0.76
LSM14A-202ENST00000540746 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
LSM14A-202ENST00000540746 A0A0D9SG42 100 aa10.23□□□□□ -0.77
LSM14A-202ENST00000540746 K7ERS5 55 aa10.21□□□□□ -0.78
LSM14A-202ENST00000540746 MUC17Q685J3 4493 aa10.2□□□□□ -0.78
LSM14A-202ENST00000540746 J3QL48 77 aa10.18□□□□□ -0.78
LSM14A-202ENST00000540746 SEC61BP60468 96 aaKnown RBP10.16□□□□□ -0.78
LSM14A-202ENST00000540746 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
LSM14A-202ENST00000540746 LINC01554Q52M75 96 aa10.07□□□□□ -0.8
LSM14A-202ENST00000540746 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
LSM14A-202ENST00000540746 KRTAP12-2P59991 146 aa10.02□□□□□ -0.81
LSM14A-202ENST00000540746 KRTAP25-1Q3LHN0 102 aa10.01□□□□□ -0.81
LSM14A-202ENST00000540746 ROMO1P60602 79 aa10□□□□□ -0.81
LSM14A-202ENST00000540746 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
LSM14A-202ENST00000540746 KRTAP19-2Q3LHN2 52 aa9.96□□□□□ -0.82
LSM14A-202ENST00000540746 M0QZ58 72 aa9.95□□□□□ -0.82
LSM14A-202ENST00000540746 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
LSM14A-202ENST00000540746 MUC2Q02817 5179 aa9.92□□□□□ -0.82
LSM14A-202ENST00000540746 SPINT4Q6UDR6 99 aa9.88□□□□□ -0.83
LSM14A-202ENST00000540746 HERC1Q15751 4861 aa9.83□□□□□ -0.84
LSM14A-202ENST00000540746 PCLOQ9Y6V0 5065 aa9.82□□□□□ -0.84
LSM14A-202ENST00000540746 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
LSM14A-202ENST00000540746 R4GN34 69 aa9.78□□□□□ -0.84
LSM14A-202ENST00000540746 FLGP20930 4061 aaPredicted RBP9.72□□□□□ -0.85
LSM14A-202ENST00000540746 HMCN2Q8NDA2 5059 aa9.7□□□□□ -0.86
LSM14A-202ENST00000540746 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
LSM14A-202ENST00000540746 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
LSM14A-202ENST00000540746 FAT4Q6V0I7 4981 aa9.44□□□□□ -0.9
LSM14A-202ENST00000540746 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
LSM14A-202ENST00000540746 RNF213Q63HN8 5207 aa9.28□□□□□ -0.92
LSM14A-202ENST00000540746 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
LSM14A-202ENST00000540746 MT1HP80294 61 aa9.17□□□□□ -0.94
LSM14A-202ENST00000540746 M0R2T5 61 aa9.1□□□□□ -0.95
LSM14A-202ENST00000540746 KRTAP15-1Q3LI76 137 aa9.09□□□□□ -0.95
LSM14A-202ENST00000540746 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
LSM14A-202ENST00000540746 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
LSM14A-202ENST00000540746 MT1FP04733 61 aa8.97□□□□□ -0.97
LSM14A-202ENST00000540746 MT2AP02795 61 aa8.97□□□□□ -0.97
LSM14A-202ENST00000540746 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
LSM14A-202ENST00000540746 PP632Q6XCG6 107 aa8.91□□□□□ -0.98
LSM14A-202ENST00000540746 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
LSM14A-202ENST00000540746 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
LSM14A-202ENST00000540746 TNP1P09430 55 aa8.86□□□□□ -0.99
LSM14A-202ENST00000540746 H3BS24 57 aa8.78□□□□□ -1
LSM14A-202ENST00000540746 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
LSM14A-202ENST00000540746 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.02
LSM14A-202ENST00000540746 KRTAP19-8Q3LI54 63 aa8.71□□□□□ -1.02
LSM14A-202ENST00000540746 MT1BP07438 61 aa8.63□□□□□ -1.03
LSM14A-202ENST00000540746 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
LSM14A-202ENST00000540746 KRTAP10-5P60370 271 aa8.52□□□□□ -1.05
LSM14A-202ENST00000540746 MT1XP80297 61 aa8.51□□□□□ -1.05
LSM14A-202ENST00000540746 LCE3AQ5TA76 89 aa8.49□□□□□ -1.05
LSM14A-202ENST00000540746 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
LSM14A-202ENST00000540746 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
LSM14A-202ENST00000540746 LCE2BO14633 110 aa8.28□□□□□ -1.08
LSM14A-202ENST00000540746 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
LSM14A-202ENST00000540746 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
LSM14A-202ENST00000540746 KRTAP10-7P60409 375 aaPredicted RBP8.25□□□□□ -1.09
LSM14A-202ENST00000540746 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
LSM14A-202ENST00000540746 USH2AO75445 5202 aa8.18□□□□□ -1.1
LSM14A-202ENST00000540746 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.11
LSM14A-202ENST00000540746 KRTAP12-3P60328 96 aa8.08□□□□□ -1.12
LSM14A-202ENST00000540746 KMT2DO14686 5537 aa7.91□□□□□ -1.14
LSM14A-202ENST00000540746 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
LSM14A-202ENST00000540746 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
LSM14A-202ENST00000540746 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
LSM14A-202ENST00000540746 SSPOA2VEC9 5147 aa7.68□□□□□ -1.18
LSM14A-202ENST00000540746 A0A0A0MQY5 61 aa7.64□□□□□ -1.19
LSM14A-202ENST00000540746 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
LSM14A-202ENST00000540746 KRTAP19-7Q3SYF9 63 aa7.59□□□□□ -1.19
LSM14A-202ENST00000540746 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
LSM14A-202ENST00000540746 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
LSM14A-202ENST00000540746 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
LSM14A-202ENST00000540746 MT1EP04732 61 aa7.37□□□□□ -1.23
LSM14A-202ENST00000540746 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
LSM14A-202ENST00000540746 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
LSM14A-202ENST00000540746 MT1LQ93083 61 aa7.33□□□□□ -1.24
LSM14A-202ENST00000540746 KRTAP19-4Q3LI73 84 aa7.2□□□□□ -1.26
LSM14A-202ENST00000540746 FCGBPQ9Y6R7 5405 aaPredicted RBP7.18□□□□□ -1.26
LSM14A-202ENST00000540746 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
LSM14A-202ENST00000540746 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms